RNA–Protein interactions for RNA: ENSMUST00000034245.15

Usb1-201, Transcript of U6 snRNA phosphodiesterase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usb1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1-201ENSMUST00000034245 Krtap17-1A2A5X6 109 aa8.45□□□□□ -1.06
Usb1-201ENSMUST00000034245 Gm7735D3YX18 52 aa8.41□□□□□ -1.06
Usb1-201ENSMUST00000034245 Cox6b2Q80ZN9 88 aa8.39□□□□□ -1.07
Usb1-201ENSMUST00000034245 2210017I01RikA0A0A6YVV1 95 aa8.38□□□□□ -1.07
Usb1-201ENSMUST00000034245 Fam229aB2KGE5 128 aa8.38□□□□□ -1.07
Usb1-201ENSMUST00000034245 Ush2AQ2QI47 5193 aa8.37□□□□□ -1.07
Usb1-201ENSMUST00000034245 Crct1Q6PAI5 102 aa8.3□□□□□ -1.08
Usb1-201ENSMUST00000034245 Krtap16-3Q8C1I6 86 aa8.3□□□□□ -1.08
Usb1-201ENSMUST00000034245 Gm17606F6ZL36 78 aa8.29□□□□□ -1.08
Usb1-201ENSMUST00000034245 Hmcn2A2AJ76 5100 aa8.29□□□□□ -1.08
Usb1-201ENSMUST00000034245 Krtap13-1Q8K198 168 aa8.27□□□□□ -1.08
Usb1-201ENSMUST00000034245 Gm3646F6S692 53 aa8.25□□□□□ -1.09
Usb1-201ENSMUST00000034245 Krtap19-1Q925H2 87 aa8.24□□□□□ -1.09
Usb1-201ENSMUST00000034245 Krtap1-3A2A588 173 aa8.23□□□□□ -1.09
Usb1-201ENSMUST00000034245 Krtap3-1A2A591 98 aa8.21□□□□□ -1.1
Usb1-201ENSMUST00000034245 Sec61gP60060 68 aa8.21□□□□□ -1.1
Usb1-201ENSMUST00000034245 Krtap19-3Q925H6 87 aa8.2□□□□□ -1.1
Usb1-201ENSMUST00000034245 Krtap1-5A2A590 122 aa8.15□□□□□ -1.1
Usb1-201ENSMUST00000034245 Ubr4A2AN08 5180 aa8.13□□□□□ -1.11
Usb1-201ENSMUST00000034245 Gm10318A0A1W2P728 225 aa8.12□□□□□ -1.11
Usb1-201ENSMUST00000034245 4932415D10RikA0A1W2P6U8 4986 aa8.08□□□□□ -1.12
Usb1-201ENSMUST00000034245 Gm10382Q3V0T5 144 aa8.08□□□□□ -1.12
Usb1-201ENSMUST00000034245 1700042G07RikB1AUF7 90 aa8.07□□□□□ -1.12
Usb1-201ENSMUST00000034245 Gm19402J3QJV4 266 aa8.07□□□□□ -1.12
Usb1-201ENSMUST00000034245 Ndufs5Q99LY9 106 aa8.07□□□□□ -1.12
Usb1-201ENSMUST00000034245 LorP18165 486 aa8□□□□□ -1.13
Usb1-201ENSMUST00000034245 BC029722A0A0N4SW31 51 aa7.99□□□□□ -1.13
Usb1-201ENSMUST00000034245 Gm9955Q8CEJ8 102 aa7.97□□□□□ -1.13
Usb1-201ENSMUST00000034245 Gm20537G3UYK7 97 aa7.97□□□□□ -1.13
Usb1-201ENSMUST00000034245 Krtap1-4Q3V2D6 188 aa7.94□□□□□ -1.14
Usb1-201ENSMUST00000034245 ZanO88799 5376 aa7.93□□□□□ -1.14
Usb1-201ENSMUST00000034245 Gm19426M0QWC7 77 aa7.88□□□□□ -1.15
Usb1-201ENSMUST00000034245 Pla2g10Q9QXX3 151 aa7.88□□□□□ -1.15
Usb1-201ENSMUST00000034245 Fat4Q2PZL6 4981 aa7.81□□□□□ -1.16
Usb1-201ENSMUST00000034245 Rnf213E9Q555 5152 aaKnown RBP7.8□□□□□ -1.16
Usb1-201ENSMUST00000034245 Gm3880A0A1B0GSB3 72 aa7.76□□□□□ -1.17
Usb1-201ENSMUST00000034245 CriptO70333 101 aa7.65□□□□□ -1.18
Usb1-201ENSMUST00000034245 Spink7Q6IE32 76 aa7.65□□□□□ -1.18
Usb1-201ENSMUST00000034245 Gm17402F6Z0L5 76 aa7.59□□□□□ -1.2
Usb1-201ENSMUST00000034245 Gm10061D3Z714 54 aa7.55□□□□□ -1.2
Usb1-201ENSMUST00000034245 Krtap12-1Q9Z287 130 aa7.52□□□□□ -1.21
Usb1-201ENSMUST00000034245 SspoQ8CG65 4998 aa7.49□□□□□ -1.21
Usb1-201ENSMUST00000034245 Gm12216A0A1W2P827 62 aa7.47□□□□□ -1.21
Usb1-201ENSMUST00000034245 Lce1jD3YUU5 139 aa7.47□□□□□ -1.21
Usb1-201ENSMUST00000034245 B930094E09RikQ8C4T2 136 aa7.47□□□□□ -1.21
Usb1-201ENSMUST00000034245 Romo1P60603 79 aa7.44□□□□□ -1.22
Usb1-201ENSMUST00000034245 Krtap19-9aF8WH65 55 aa7.43□□□□□ -1.22
Usb1-201ENSMUST00000034245 Sprr2a3Q4KL71 83 aa7.43□□□□□ -1.22
Usb1-201ENSMUST00000034245 Sprr2a1Q9CQK8 83 aa7.43□□□□□ -1.22
Usb1-201ENSMUST00000034245 Krtap19-2Q925I0 141 aa7.33□□□□□ -1.24
Usb1-201ENSMUST00000034245 Krtap9-5A2A5X3 358 aa7.31□□□□□ -1.24
Usb1-201ENSMUST00000034245 Prm2P07978 107 aa7.28□□□□□ -1.24
Usb1-201ENSMUST00000034245 Gm21887J3QQ04 176 aa7.22□□□□□ -1.25
Usb1-201ENSMUST00000034245 Gm11562A0PK51 136 aa7.21□□□□□ -1.25
Usb1-201ENSMUST00000034245 Gm11569B1AQB1 180 aa7.21□□□□□ -1.25
Usb1-201ENSMUST00000034245 Gm19668J3QMD1 248 aa7.1□□□□□ -1.27
Usb1-201ENSMUST00000034245 Camk2n1Q6QWF9 78 aa7.02□□□□□ -1.29
Usb1-201ENSMUST00000034245 Lce1iQ9D6P5 149 aa7.02□□□□□ -1.29
Usb1-201ENSMUST00000034245 Gm6358A0A087WPH4 74 aa6.95□□□□□ -1.3
Usb1-201ENSMUST00000034245 Muc5bE9Q5I3 4800 aa6.95□□□□□ -1.3
Usb1-201ENSMUST00000034245 Lce1a2Q9D1K4 149 aa6.91□□□□□ -1.3
Usb1-201ENSMUST00000034245 Krtap4-2B1AQ85 167 aa6.84□□□□□ -1.31
Usb1-201ENSMUST00000034245 Krtap7-1Q9D3I6 87 aa6.8□□□□□ -1.32
Usb1-201ENSMUST00000034245 Gm40193A0A1B0GT39 78 aa6.77□□□□□ -1.33
Usb1-201ENSMUST00000034245 Mt2P02798 61 aa6.76□□□□□ -1.33
Usb1-201ENSMUST00000034245 Lce1gQ9D195 139 aa6.72□□□□□ -1.33
Usb1-201ENSMUST00000034245 Krtap8-1O08633 61 aa6.71□□□□□ -1.34
Usb1-201ENSMUST00000034245 Mp68P56379 58 aa6.69□□□□□ -1.34
Usb1-201ENSMUST00000034245 Krtap19-9bQ99NG9 58 aa6.69□□□□□ -1.34
Usb1-201ENSMUST00000034245 Gm11555B1AQ89 175 aa6.66□□□□□ -1.34
Usb1-201ENSMUST00000034245 Syne2Q6ZWQ0 6874 aaKnown RBP6.61□□□□□ -1.35
Usb1-201ENSMUST00000034245 Krtap4-6Q3V4B7 195 aa6.58□□□□□ -1.36
Usb1-201ENSMUST00000034245 Gm11596B1AQB0 205 aa6.49□□□□□ -1.37
Usb1-201ENSMUST00000034245 Mdn1A2ANY6 5589 aaKnown RBP6.47□□□□□ -1.37
Usb1-201ENSMUST00000034245 Krtap4-1Q3UUY3 169 aa6.45□□□□□ -1.38
Usb1-201ENSMUST00000034245 Gm20538F6Z9R1 75 aa6.43□□□□□ -1.38
Usb1-201ENSMUST00000034245 Krtap22-2J3QNX6 67 aa6.43□□□□□ -1.38
Usb1-201ENSMUST00000034245 Tnp1P10856 55 aa6.36□□□□□ -1.39
Usb1-201ENSMUST00000034245 Gm11564A2A4L9 201 aa6.28□□□□□ -1.4
Usb1-201ENSMUST00000034245 Gm11563B1AQ90 168 aa6.28□□□□□ -1.4
Usb1-201ENSMUST00000034245 Gm11595B1AQA7 289 aa6.28□□□□□ -1.4
Usb1-201ENSMUST00000034245 Krtap4-8B1AQA8 209 aa6.28□□□□□ -1.4
Usb1-201ENSMUST00000034245 Krtap9-3Q3V2C1 136 aa6.25□□□□□ -1.41
Usb1-201ENSMUST00000034245 Lce1hQ9D6R3 140 aa6.14□□□□□ -1.43
Usb1-201ENSMUST00000034245 Ndufaf8A2AMZ4 74 aa6.11□□□□□ -1.43
Usb1-201ENSMUST00000034245 Krtap4-9B1AQA9 244 aa6.11□□□□□ -1.43
Usb1-201ENSMUST00000034245 Mt4P47945 62 aa6.11□□□□□ -1.43
Usb1-201ENSMUST00000034245 2310046K23RikA0A0A6YVW6 87 aa6.06□□□□□ -1.44
Usb1-201ENSMUST00000034245 Lce1bQ9D149 137 aa6.01□□□□□ -1.45
Usb1-201ENSMUST00000034245 Gm38119A0A0A6YX29 146 aa5.9□□□□□ -1.46
Usb1-201ENSMUST00000034245 Krtap4-13Q9D7P3 165 aa5.88□□□□□ -1.47
Usb1-201ENSMUST00000034245 Fsip2A2ARZ3 6995 aa5.86□□□□□ -1.47
Usb1-201ENSMUST00000034245 Sprr2kO70562 68 aa5.85□□□□□ -1.47
Usb1-201ENSMUST00000034245 Gm10272F7CZ33 110 aa5.83□□□□□ -1.48
Usb1-201ENSMUST00000034245 2300003K06RikA2A4M0 262 aa5.79□□□□□ -1.48
Usb1-201ENSMUST00000034245 Krtap4-7Q9D732 168 aa5.7□□□□□ -1.5
Usb1-201ENSMUST00000034245 Krtap6-3A0A087WQL6 57 aa5.68□□□□□ -1.5
Usb1-201ENSMUST00000034245 Lce3bQ9CQM7 98 aa5.6□□□□□ -1.51
Usb1-201ENSMUST00000034245 A0A1Y7VJH8 109 aa5.57□□□□□ -1.52
Usb1-201ENSMUST00000034245 Lce1lQ9D1G7 135 aa5.57□□□□□ -1.52
Retrieved 100 of 22,080 RNA–protein pairs in 62.1 ms