RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Sprr2a1Q9CQK8 83 aa5.96□□□□□ -1.45
Col4a1-201ENSMUST00000033898 Sprr2gO70558 76 aa5.94□□□□□ -1.46
Col4a1-201ENSMUST00000033898 Dnah17Q69Z23 4481 aa5.94□□□□□ -1.46
Col4a1-201ENSMUST00000033898 Krtap1-4Q3V2D6 188 aa5.93□□□□□ -1.46
Col4a1-201ENSMUST00000033898 TnxbO35452 4006 aa5.88□□□□□ -1.47
Col4a1-201ENSMUST00000033898 Krtap19-9bQ99NG9 58 aa5.88□□□□□ -1.47
Col4a1-201ENSMUST00000033898 Dnah3Q8BW94 4083 aa5.85□□□□□ -1.47
Col4a1-201ENSMUST00000033898 Dnah1E9Q8T7 4250 aa5.84□□□□□ -1.47
Col4a1-201ENSMUST00000033898 Krtap12-1Q9Z287 130 aa5.82□□□□□ -1.48
Col4a1-201ENSMUST00000033898 Dnah9B1AR51 4484 aa5.79□□□□□ -1.48
Col4a1-201ENSMUST00000033898 Dnah2P0C6F1 4456 aa5.79□□□□□ -1.48
Col4a1-201ENSMUST00000033898 ApobE9Q414 4505 aa5.79□□□□□ -1.48
Col4a1-201ENSMUST00000033898 Dnah5Q8VHE6 4621 aa5.78□□□□□ -1.48
Col4a1-201ENSMUST00000033898 Dync2h1Q45VK7 4306 aa5.77□□□□□ -1.49
Col4a1-201ENSMUST00000033898 Fras1Q80T14 4010 aa5.77□□□□□ -1.49
Col4a1-201ENSMUST00000033898 Vps13dB1ART2 4390 aa5.74□□□□□ -1.49
Col4a1-201ENSMUST00000033898 Dnah7cA0A087WR13 4024 aa5.69□□□□□ -1.5
Col4a1-201ENSMUST00000033898 Dnah7aE9Q0T8 4024 aa5.69□□□□□ -1.5
Col4a1-201ENSMUST00000033898 Lce3bQ9CQM7 98 aa5.65□□□□□ -1.51
Col4a1-201ENSMUST00000033898 Vps13bQ80TY5 3993 aa5.64□□□□□ -1.51
Col4a1-201ENSMUST00000033898 PlecQ9QXS1 4691 aaKnown RBP5.64□□□□□ -1.51
Col4a1-201ENSMUST00000033898 Stard9Q80TF6 4561 aa5.57□□□□□ -1.52
Col4a1-201ENSMUST00000033898 Lce1mQ9CR91 182 aa5.56□□□□□ -1.52
Col4a1-201ENSMUST00000033898 Lce3cQ91V05 98 aa5.56□□□□□ -1.52
Col4a1-201ENSMUST00000033898 Gm10272F7CZ33 110 aa5.51□□□□□ -1.53
Col4a1-201ENSMUST00000033898 Pkd1O08852 4293 aa5.49□□□□□ -1.53
Col4a1-201ENSMUST00000033898 Fat2Q5F226 4351 aa5.49□□□□□ -1.53
Col4a1-201ENSMUST00000033898 2310046K23RikA0A0A6YVW6 87 aa5.48□□□□□ -1.53
Col4a1-201ENSMUST00000033898 Krtap9-5A2A5X3 358 aa5.47□□□□□ -1.53
Col4a1-201ENSMUST00000033898 Gm38119A0A0A6YX29 146 aa5.43□□□□□ -1.54
Col4a1-201ENSMUST00000033898 Gm10100J3QK64 120 aa5.42□□□□□ -1.54
Col4a1-201ENSMUST00000033898 SacsQ9JLC8 4582 aa5.41□□□□□ -1.54
Col4a1-201ENSMUST00000033898 Lce3eF8VQJ0 98 aa5.38□□□□□ -1.55
Col4a1-201ENSMUST00000033898 Lce3fQ6PAI4 98 aa5.38□□□□□ -1.55
Col4a1-201ENSMUST00000033898 Lrp1bQ9JI18 4599 aa5.37□□□□□ -1.55
Col4a1-201ENSMUST00000033898 Dync1h1Q9JHU4 4644 aaKnown RBP5.36□□□□□ -1.55
Col4a1-201ENSMUST00000033898 Hectd4E9Q2E4 4418 aa5.35□□□□□ -1.55
Col4a1-201ENSMUST00000033898 Sprr2iO70560 76 aa5.32□□□□□ -1.56
Col4a1-201ENSMUST00000033898 Lce3dE9Q8V1 98 aa5.32□□□□□ -1.56
Col4a1-201ENSMUST00000033898 Lce1jD3YUU5 139 aa5.31□□□□□ -1.56
Col4a1-201ENSMUST00000033898 Lce1gQ9D195 139 aa5.31□□□□□ -1.56
Col4a1-201ENSMUST00000033898 Lce1iQ9D6P5 149 aa5.31□□□□□ -1.56
Col4a1-201ENSMUST00000033898 Lce1hQ9D6R3 140 aa5.31□□□□□ -1.56
Col4a1-201ENSMUST00000033898 Gm10142J3KMP7 120 aa5.27□□□□□ -1.57
Col4a1-201ENSMUST00000033898 Fat1A0A1L1SQU7 4645 aa5.26□□□□□ -1.57
Col4a1-201ENSMUST00000033898 Mycbp2Q7TPH6 4711 aa5.25□□□□□ -1.57
Col4a1-201ENSMUST00000033898 Lrp1Q91ZX7 4545 aaKnown RBP5.24□□□□□ -1.57
Col4a1-201ENSMUST00000033898 Lce3aQ497I5 98 aa5.22□□□□□ -1.57
Col4a1-201ENSMUST00000033898 Krtap16-3Q8C1I6 86 aa5.22□□□□□ -1.57
Col4a1-201ENSMUST00000033898 Fat3Q8BNA6 4555 aa5.21□□□□□ -1.57
Col4a1-201ENSMUST00000033898 Krtap19-3Q925H6 87 aa5.21□□□□□ -1.58
Col4a1-201ENSMUST00000033898 Pkhd1E9PZ36 4059 aa5.17□□□□□ -1.58
Col4a1-201ENSMUST00000033898 Pkhd1l1Q80ZA4 4249 aa5.13□□□□□ -1.59
Col4a1-201ENSMUST00000033898 Krtap22-2J3QNX6 67 aa5.12□□□□□ -1.59
Col4a1-201ENSMUST00000033898 Mt2P02798 61 aa5.12□□□□□ -1.59
Col4a1-201ENSMUST00000033898 Sprr2fO70557 76 aa5.11□□□□□ -1.59
Col4a1-201ENSMUST00000033898 Lce1fB9EJP6 147 aa5.03□□□□□ -1.6
Col4a1-201ENSMUST00000033898 Lce1cQ9D1C5 147 aa5.03□□□□□ -1.6
Col4a1-201ENSMUST00000033898 Lce1lQ9D1G7 135 aa5.03□□□□□ -1.6
Col4a1-201ENSMUST00000033898 Lce1dQ9D731 133 aa5.03□□□□□ -1.6
Col4a1-201ENSMUST00000033898 Lce1bQ9D149 137 aa5.03□□□□□ -1.6
Col4a1-201ENSMUST00000033898 Gm10024A0A0A0MQA4 119 aa5.02□□□□□ -1.61
Col4a1-201ENSMUST00000033898 Sprr2eO70556 76 aa5.02□□□□□ -1.61
Col4a1-201ENSMUST00000033898 Krtap1-3A2A588 173 aa4.98□□□□□ -1.61
Col4a1-201ENSMUST00000033898 Krtap19-1Q925H2 87 aa4.98□□□□□ -1.61
Col4a1-201ENSMUST00000033898 Ryr1E9PZQ0 5035 aa4.97□□□□□ -1.61
Col4a1-201ENSMUST00000033898 Prm1P02319 51 aa4.96□□□□□ -1.61
Col4a1-201ENSMUST00000033898 Ryr3A2AGL3 4863 aa4.94□□□□□ -1.62
Col4a1-201ENSMUST00000033898 Lce1eQ9D139 143 aa4.94□□□□□ -1.62
Col4a1-201ENSMUST00000033898 Krtap19-2Q925I0 141 aa4.89□□□□□ -1.63
Col4a1-201ENSMUST00000033898 Gm7735D3YX18 52 aa4.87□□□□□ -1.63
Col4a1-201ENSMUST00000033898 Lrp2A2ARV4 4660 aa4.85□□□□□ -1.63
Col4a1-201ENSMUST00000033898 Gm11569B1AQB1 180 aa4.82□□□□□ -1.64
Col4a1-201ENSMUST00000033898 Dnah8Q91XQ0 4731 aa4.82□□□□□ -1.64
Col4a1-201ENSMUST00000033898 Gm9789Q8BIG3 52 aa4.81□□□□□ -1.64
Col4a1-201ENSMUST00000033898 Mt4P47945 62 aa4.78□□□□□ -1.64
Col4a1-201ENSMUST00000033898 Dnhd1D3Z2X2 4750 aa4.72□□□□□ -1.65
Col4a1-201ENSMUST00000033898 Kmt2cQ8BRH4 4903 aa4.72□□□□□ -1.65
Col4a1-201ENSMUST00000033898 Krtap4-2B1AQ85 167 aa4.71□□□□□ -1.66
Col4a1-201ENSMUST00000033898 Gm10061D3Z714 54 aa4.68□□□□□ -1.66
Col4a1-201ENSMUST00000033898 Krtap4-6Q3V4B7 195 aa4.64□□□□□ -1.67
Col4a1-201ENSMUST00000033898 Krtap19-4Q925H7 84 aa4.63□□□□□ -1.67
Col4a1-201ENSMUST00000033898 Krtap9-3Q3V2C1 136 aa4.6□□□□□ -1.67
Col4a1-201ENSMUST00000033898 Ryr2E9Q401 4966 aaKnown RBP4.58□□□□□ -1.68
Col4a1-201ENSMUST00000033898 Herc2Q4U2R1 4836 aa4.56□□□□□ -1.68
Col4a1-201ENSMUST00000033898 Krtap17-1A2A5X6 109 aa4.51□□□□□ -1.69
Col4a1-201ENSMUST00000033898 Krtap4-1Q3UUY3 169 aa4.42□□□□□ -1.7
Col4a1-201ENSMUST00000033898 Herc1E9PZP8 4859 aa4.4□□□□□ -1.7
Col4a1-201ENSMUST00000033898 HydinQ80W93 5154 aa4.38□□□□□ -1.71
Col4a1-201ENSMUST00000033898 Gm11596B1AQB0 205 aa4.37□□□□□ -1.71
Col4a1-201ENSMUST00000033898 PcloQ9QYX7 5068 aa4.37□□□□□ -1.71
Col4a1-201ENSMUST00000033898 Lce1a2Q9D1K4 149 aa4.35□□□□□ -1.71
Col4a1-201ENSMUST00000033898 2300003K06RikA2A4M0 262 aa4.34□□□□□ -1.71
Col4a1-201ENSMUST00000033898 Abca13Q5SSE9 5034 aa4.34□□□□□ -1.71
Col4a1-201ENSMUST00000033898 Sprr2dO70555 85 aa4.33□□□□□ -1.72
Col4a1-201ENSMUST00000033898 Sprr2hO70559 108 aa4.32□□□□□ -1.72
Col4a1-201ENSMUST00000033898 Krtap31-1Q9D644 177 aa4.31□□□□□ -1.72
Col4a1-201ENSMUST00000033898 Gm11564A2A4L9 201 aa4.3□□□□□ -1.72
Col4a1-201ENSMUST00000033898 Gm11563B1AQ90 168 aa4.3□□□□□ -1.72
Col4a1-201ENSMUST00000033898 Gm11595B1AQA7 289 aa4.3□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 101.5 ms