RNA–Protein interactions for RNA: ENSMUST00000029421.5

Ptx3-201, Transcript of Pentraxin-related protein PTX3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptx3, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3-201ENSMUST00000029421 Rnase13Q5GAM7 153 aa11.49□□□□□ -0.57
Ptx3-201ENSMUST00000029421 Lrp2A2ARV4 4660 aa11.39□□□□□ -0.59
Ptx3-201ENSMUST00000029421 PcloQ9QYX7 5068 aa11.36□□□□□ -0.59
Ptx3-201ENSMUST00000029421 Gm17416Q30KP4 66 aa11.35□□□□□ -0.59
Ptx3-201ENSMUST00000029421 Gm10382Q3V0T5 144 aa11.34□□□□□ -0.59
Ptx3-201ENSMUST00000029421 Romo1P60603 79 aa11.25□□□□□ -0.61
Ptx3-201ENSMUST00000029421 Lce1mQ9CR91 182 aa11.17□□□□□ -0.62
Ptx3-201ENSMUST00000029421 Krtap3-1A2A591 98 aa11.12□□□□□ -0.63
Ptx3-201ENSMUST00000029421 2210017I01RikA0A0A6YVV1 95 aa11.06□□□□□ -0.64
Ptx3-201ENSMUST00000029421 Sec61bQ9CQS8 96 aaKnown RBP11.06□□□□□ -0.64
Ptx3-201ENSMUST00000029421 2310057N15RikQ9D6T8 200 aa11.03□□□□□ -0.64
Ptx3-201ENSMUST00000029421 Herc1E9PZP8 4859 aa10.98□□□□□ -0.65
Ptx3-201ENSMUST00000029421 Gm20538F6Z9R1 75 aa10.92□□□□□ -0.66
Ptx3-201ENSMUST00000029421 CriptO70333 101 aa10.91□□□□□ -0.66
Ptx3-201ENSMUST00000029421 Mp68P56379 58 aa10.91□□□□□ -0.66
Ptx3-201ENSMUST00000029421 BC029722A0A0N4SW31 51 aa10.77□□□□□ -0.69
Ptx3-201ENSMUST00000029421 Gm19426M0QWC7 77 aa10.77□□□□□ -0.69
Ptx3-201ENSMUST00000029421 Krtap13-1Q8K198 168 aa10.77□□□□□ -0.69
Ptx3-201ENSMUST00000029421 B930094E09RikQ8C4T2 136 aa10.76□□□□□ -0.69
Ptx3-201ENSMUST00000029421 Gm17402F6Z0L5 76 aa10.73□□□□□ -0.69
Ptx3-201ENSMUST00000029421 Krtap16-3Q8C1I6 86 aa10.68□□□□□ -0.7
Ptx3-201ENSMUST00000029421 Gm18596A0A1W2P860 280 aa10.65□□□□□ -0.7
Ptx3-201ENSMUST00000029421 Ush2AQ2QI47 5193 aa10.63□□□□□ -0.71
Ptx3-201ENSMUST00000029421 Gm21887J3QQ04 176 aa10.61□□□□□ -0.71
Ptx3-201ENSMUST00000029421 Crct1Q6PAI5 102 aa10.61□□□□□ -0.71
Ptx3-201ENSMUST00000029421 Fam229aB2KGE5 128 aa10.59□□□□□ -0.71
Ptx3-201ENSMUST00000029421 Krtap1-5A2A590 122 aa10.59□□□□□ -0.71
Ptx3-201ENSMUST00000029421 Krtap19-1Q925H2 87 aa10.59□□□□□ -0.71
Ptx3-201ENSMUST00000029421 Hmcn2A2AJ76 5100 aa10.54□□□□□ -0.72
Ptx3-201ENSMUST00000029421 Krtap19-3Q925H6 87 aa10.53□□□□□ -0.72
Ptx3-201ENSMUST00000029421 Gm10318A0A1W2P728 225 aa10.5□□□□□ -0.73
Ptx3-201ENSMUST00000029421 Gm9789Q8BIG3 52 aa10.5□□□□□ -0.73
Ptx3-201ENSMUST00000029421 Prm1P02319 51 aa10.44□□□□□ -0.74
Ptx3-201ENSMUST00000029421 Krtap1-3A2A588 173 aa10.42□□□□□ -0.74
Ptx3-201ENSMUST00000029421 Gm40193A0A1B0GT39 78 aa10.41□□□□□ -0.74
Ptx3-201ENSMUST00000029421 Gm7735D3YX18 52 aa10.37□□□□□ -0.75
Ptx3-201ENSMUST00000029421 Ubr4A2AN08 5180 aa10.36□□□□□ -0.75
Ptx3-201ENSMUST00000029421 Gm19402J3QJV4 266 aa10.3□□□□□ -0.76
Ptx3-201ENSMUST00000029421 Krtap7-1Q9D3I6 87 aa10.29□□□□□ -0.76
Ptx3-201ENSMUST00000029421 4932415D10RikA0A1W2P6U8 4986 aa10.28□□□□□ -0.76
Ptx3-201ENSMUST00000029421 ZanO88799 5376 aa10.28□□□□□ -0.76
Ptx3-201ENSMUST00000029421 Sprr2a3Q4KL71 83 aa10.2□□□□□ -0.78
Ptx3-201ENSMUST00000029421 Sprr2a1Q9CQK8 83 aa10.2□□□□□ -0.78
Ptx3-201ENSMUST00000029421 LorP18165 486 aa10.11□□□□□ -0.79
Ptx3-201ENSMUST00000029421 Krtap1-4Q3V2D6 188 aa10.06□□□□□ -0.8
Ptx3-201ENSMUST00000029421 Ndufaf8A2AMZ4 74 aa10.04□□□□□ -0.8
Ptx3-201ENSMUST00000029421 Spink7Q6IE32 76 aa10.03□□□□□ -0.8
Ptx3-201ENSMUST00000029421 Rnf213E9Q555 5152 aaKnown RBP10.02□□□□□ -0.81
Ptx3-201ENSMUST00000029421 Fat4Q2PZL6 4981 aa9.97□□□□□ -0.81
Ptx3-201ENSMUST00000029421 Camk2n1Q6QWF9 78 aa9.79□□□□□ -0.84
Ptx3-201ENSMUST00000029421 Lce1jD3YUU5 139 aa9.7□□□□□ -0.86
Ptx3-201ENSMUST00000029421 Krtap12-1Q9Z287 130 aa9.66□□□□□ -0.86
Ptx3-201ENSMUST00000029421 SspoQ8CG65 4998 aa9.61□□□□□ -0.87
Ptx3-201ENSMUST00000029421 Gm19668J3QMD1 248 aa9.57□□□□□ -0.88
Ptx3-201ENSMUST00000029421 Krtap19-9aF8WH65 55 aa9.55□□□□□ -0.88
Ptx3-201ENSMUST00000029421 Prm2P07978 107 aa9.43□□□□□ -0.9
Ptx3-201ENSMUST00000029421 Krtap17-1A2A5X6 109 aa9.4□□□□□ -0.91
Ptx3-201ENSMUST00000029421 Gm10061D3Z714 54 aa9.39□□□□□ -0.91
Ptx3-201ENSMUST00000029421 Tnp1P10856 55 aa9.37□□□□□ -0.91
Ptx3-201ENSMUST00000029421 Krtap19-2Q925I0 141 aa9.36□□□□□ -0.91
Ptx3-201ENSMUST00000029421 Krtap9-5A2A5X3 358 aa9.32□□□□□ -0.92
Ptx3-201ENSMUST00000029421 Gm9112A2AI92 75 aa9.15□□□□□ -0.95
Ptx3-201ENSMUST00000029421 Lce1iQ9D6P5 149 aa9.12□□□□□ -0.95
Ptx3-201ENSMUST00000029421 Lce1a2Q9D1K4 149 aa9.01□□□□□ -0.97
Ptx3-201ENSMUST00000029421 Muc5bE9Q5I3 4800 aa8.97□□□□□ -0.97
Ptx3-201ENSMUST00000029421 Krtap8-1O08633 61 aa8.97□□□□□ -0.97
Ptx3-201ENSMUST00000029421 Gm11569B1AQB1 180 aa8.9□□□□□ -0.98
Ptx3-201ENSMUST00000029421 2310046K23RikA0A0A6YVW6 87 aa8.89□□□□□ -0.99
Ptx3-201ENSMUST00000029421 Gm6358A0A087WPH4 74 aa8.84□□□□□ -0.99
Ptx3-201ENSMUST00000029421 Krtap19-9bQ99NG9 58 aa8.81□□□□□ -1
Ptx3-201ENSMUST00000029421 Mt2P02798 61 aa8.65□□□□□ -1.02
Ptx3-201ENSMUST00000029421 Krtap4-2B1AQ85 167 aa8.32□□□□□ -1.08
Ptx3-201ENSMUST00000029421 Gm11562A0PK51 136 aa8.28□□□□□ -1.08
Ptx3-201ENSMUST00000029421 Krtap9-3Q3V2C1 136 aa8.27□□□□□ -1.09
Ptx3-201ENSMUST00000029421 Lce1gQ9D195 139 aa8.27□□□□□ -1.09
Ptx3-201ENSMUST00000029421 Mdn1A2ANY6 5589 aaKnown RBP8.25□□□□□ -1.09
Ptx3-201ENSMUST00000029421 Lce1hQ9D6R3 140 aa8.19□□□□□ -1.1
Ptx3-201ENSMUST00000029421 Gm11555B1AQ89 175 aa8.17□□□□□ -1.1
Ptx3-201ENSMUST00000029421 Krtap22-2J3QNX6 67 aa8.17□□□□□ -1.1
Ptx3-201ENSMUST00000029421 Krtap4-6Q3V4B7 195 aa8.11□□□□□ -1.11
Ptx3-201ENSMUST00000029421 A0A1Y7VJH8 109 aa8.08□□□□□ -1.12
Ptx3-201ENSMUST00000029421 Gm11596B1AQB0 205 aa7.99□□□□□ -1.13
Ptx3-201ENSMUST00000029421 Syne2Q6ZWQ0 6874 aaKnown RBP7.98□□□□□ -1.13
Ptx3-201ENSMUST00000029421 Krtap4-1Q3UUY3 169 aa7.96□□□□□ -1.14
Ptx3-201ENSMUST00000029421 4933428G20RikQ9D3X4 101 aa7.94□□□□□ -1.14
Ptx3-201ENSMUST00000029421 Sprr2gO70558 76 aa7.89□□□□□ -1.15
Ptx3-201ENSMUST00000029421 Sprr2dO70555 85 aa7.75□□□□□ -1.17
Ptx3-201ENSMUST00000029421 Lce1dQ9D731 133 aa7.73□□□□□ -1.17
Ptx3-201ENSMUST00000029421 Gm11564A2A4L9 201 aa7.72□□□□□ -1.17
Ptx3-201ENSMUST00000029421 Gm11563B1AQ90 168 aa7.72□□□□□ -1.17
Ptx3-201ENSMUST00000029421 Gm11595B1AQA7 289 aa7.72□□□□□ -1.17
Ptx3-201ENSMUST00000029421 Krtap4-8B1AQA8 209 aa7.72□□□□□ -1.17
Ptx3-201ENSMUST00000029421 Krtap28-10A0A1Y7VP58 119 aa7.7□□□□□ -1.18
Ptx3-201ENSMUST00000029421 Gm11938Q9D3H4 131 aa7.63□□□□□ -1.19
Ptx3-201ENSMUST00000029421 Gm10272F7CZ33 110 aa7.6□□□□□ -1.19
Ptx3-201ENSMUST00000029421 Mt4P47945 62 aa7.53□□□□□ -1.2
Ptx3-201ENSMUST00000029421 Krtap4-9B1AQA9 244 aa7.52□□□□□ -1.21
Ptx3-201ENSMUST00000029421 Lce1eQ9D139 143 aa7.49□□□□□ -1.21
Ptx3-201ENSMUST00000029421 Lce1bQ9D149 137 aa7.47□□□□□ -1.21
Ptx3-201ENSMUST00000029421 A0A1Y7VLE6 161 aa7.39□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms