RNA–Protein interactions for RNA: ENSMUST00000028580.11

Ccdc34-201, Transcript of Coiled-coil domain-containing protein 34, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc34, Length 2,070 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc34-201ENSMUST00000028580 Birc6O88738 4882 aa9.9□□□□□ -0.83
Ccdc34-201ENSMUST00000028580 Herc2Q4U2R1 4836 aa9.87□□□□□ -0.83
Ccdc34-201ENSMUST00000028580 Kiaa1109A2AAE1 5005 aa9.84□□□□□ -0.83
Ccdc34-201ENSMUST00000028580 Gm12216A0A1W2P827 62 aa9.79□□□□□ -0.84
Ccdc34-201ENSMUST00000028580 Romo1P60603 79 aa9.75□□□□□ -0.85
Ccdc34-201ENSMUST00000028580 HydinQ80W93 5154 aa9.59□□□□□ -0.87
Ccdc34-201ENSMUST00000028580 CriptO70333 101 aa9.59□□□□□ -0.87
Ccdc34-201ENSMUST00000028580 Krtap13-1Q8K198 168 aa9.58□□□□□ -0.88
Ccdc34-201ENSMUST00000028580 BC029722A0A0N4SW31 51 aa9.54□□□□□ -0.88
Ccdc34-201ENSMUST00000028580 B930094E09RikQ8C4T2 136 aa9.51□□□□□ -0.89
Ccdc34-201ENSMUST00000028580 Lrp2A2ARV4 4660 aa9.48□□□□□ -0.89
Ccdc34-201ENSMUST00000028580 Sec61bQ9CQS8 96 aaKnown RBP9.46□□□□□ -0.9
Ccdc34-201ENSMUST00000028580 Gm19426M0QWC7 77 aa9.44□□□□□ -0.9
Ccdc34-201ENSMUST00000028580 Krtap1-5A2A590 122 aa9.43□□□□□ -0.9
Ccdc34-201ENSMUST00000028580 2310057N15RikQ9D6T8 200 aa9.43□□□□□ -0.9
Ccdc34-201ENSMUST00000028580 Gm17402F6Z0L5 76 aa9.41□□□□□ -0.9
Ccdc34-201ENSMUST00000028580 Gm21887J3QQ04 176 aa9.4□□□□□ -0.91
Ccdc34-201ENSMUST00000028580 PcloQ9QYX7 5068 aa9.27□□□□□ -0.93
Ccdc34-201ENSMUST00000028580 Lce1mQ9CR91 182 aa9.22□□□□□ -0.93
Ccdc34-201ENSMUST00000028580 Mp68P56379 58 aa9.17□□□□□ -0.94
Ccdc34-201ENSMUST00000028580 Krtap16-3Q8C1I6 86 aa9.15□□□□□ -0.94
Ccdc34-201ENSMUST00000028580 Fam229aB2KGE5 128 aa9.14□□□□□ -0.95
Ccdc34-201ENSMUST00000028580 Gm20538F6Z9R1 75 aa9.13□□□□□ -0.95
Ccdc34-201ENSMUST00000028580 Sprr2a3Q4KL71 83 aa9.11□□□□□ -0.95
Ccdc34-201ENSMUST00000028580 Sprr2a1Q9CQK8 83 aa9.11□□□□□ -0.95
Ccdc34-201ENSMUST00000028580 Gm19402J3QJV4 266 aa9.1□□□□□ -0.95
Ccdc34-201ENSMUST00000028580 Krtap19-1Q925H2 87 aa9.04□□□□□ -0.96
Ccdc34-201ENSMUST00000028580 Krtap7-1Q9D3I6 87 aa9.02□□□□□ -0.97
Ccdc34-201ENSMUST00000028580 Herc1E9PZP8 4859 aa8.98□□□□□ -0.97
Ccdc34-201ENSMUST00000028580 Krtap19-3Q925H6 87 aa8.95□□□□□ -0.98
Ccdc34-201ENSMUST00000028580 Spink7Q6IE32 76 aa8.94□□□□□ -0.98
Ccdc34-201ENSMUST00000028580 Crct1Q6PAI5 102 aa8.92□□□□□ -0.98
Ccdc34-201ENSMUST00000028580 Gm40193A0A1B0GT39 78 aa8.9□□□□□ -0.98
Ccdc34-201ENSMUST00000028580 Gm10318A0A1W2P728 225 aa8.89□□□□□ -0.99
Ccdc34-201ENSMUST00000028580 Krtap1-4Q3V2D6 188 aa8.8□□□□□ -1
Ccdc34-201ENSMUST00000028580 Gm18596A0A1W2P860 280 aa8.75□□□□□ -1.01
Ccdc34-201ENSMUST00000028580 Gm9789Q8BIG3 52 aa8.72□□□□□ -1.01
Ccdc34-201ENSMUST00000028580 Ush2AQ2QI47 5193 aa8.72□□□□□ -1.01
Ccdc34-201ENSMUST00000028580 Krtap1-3A2A588 173 aa8.69□□□□□ -1.02
Ccdc34-201ENSMUST00000028580 Prm1P02319 51 aa8.67□□□□□ -1.02
Ccdc34-201ENSMUST00000028580 Hmcn2A2AJ76 5100 aa8.66□□□□□ -1.02
Ccdc34-201ENSMUST00000028580 Camk2n1Q6QWF9 78 aa8.6□□□□□ -1.03
Ccdc34-201ENSMUST00000028580 Gm7735D3YX18 52 aa8.58□□□□□ -1.04
Ccdc34-201ENSMUST00000028580 A0A1Y7VJH8 109 aa8.57□□□□□ -1.04
Ccdc34-201ENSMUST00000028580 Ndufaf8A2AMZ4 74 aa8.53□□□□□ -1.04
Ccdc34-201ENSMUST00000028580 ZanO88799 5376 aa8.52□□□□□ -1.05
Ccdc34-201ENSMUST00000028580 Gm19668J3QMD1 248 aa8.51□□□□□ -1.05
Ccdc34-201ENSMUST00000028580 4932415D10RikA0A1W2P6U8 4986 aa8.48□□□□□ -1.05
Ccdc34-201ENSMUST00000028580 Ubr4A2AN08 5180 aa8.45□□□□□ -1.06
Ccdc34-201ENSMUST00000028580 LorP18165 486 aa8.44□□□□□ -1.06
Ccdc34-201ENSMUST00000028580 Lce1jD3YUU5 139 aa8.41□□□□□ -1.06
Ccdc34-201ENSMUST00000028580 Krtap12-1Q9Z287 130 aa8.38□□□□□ -1.07
Ccdc34-201ENSMUST00000028580 Krtap19-9aF8WH65 55 aa8.36□□□□□ -1.07
Ccdc34-201ENSMUST00000028580 Rnf213E9Q555 5152 aaKnown RBP8.29□□□□□ -1.08
Ccdc34-201ENSMUST00000028580 Fat4Q2PZL6 4981 aa8.25□□□□□ -1.09
Ccdc34-201ENSMUST00000028580 Krtap28-10A0A1Y7VP58 119 aa8.22□□□□□ -1.09
Ccdc34-201ENSMUST00000028580 Tnp1P10856 55 aa8.12□□□□□ -1.11
Ccdc34-201ENSMUST00000028580 Krtap4-1Q3UUY3 169 aa8.11□□□□□ -1.11
Ccdc34-201ENSMUST00000028580 Prm2P07978 107 aa8.09□□□□□ -1.11
Ccdc34-201ENSMUST00000028580 A0A1Y7VLE6 161 aa8.04□□□□□ -1.12
Ccdc34-201ENSMUST00000028580 Krtap8-1O08633 61 aa8.04□□□□□ -1.12
Ccdc34-201ENSMUST00000028580 SspoQ8CG65 4998 aa7.99□□□□□ -1.13
Ccdc34-201ENSMUST00000028580 Krtap28-13A0A087WQP5 138 aa7.93□□□□□ -1.14
Ccdc34-201ENSMUST00000028580 Krtap17-1A2A5X6 109 aa7.93□□□□□ -1.14
Ccdc34-201ENSMUST00000028580 Krtap19-2Q925I0 141 aa7.91□□□□□ -1.14
Ccdc34-201ENSMUST00000028580 Lce1iQ9D6P5 149 aa7.91□□□□□ -1.14
Ccdc34-201ENSMUST00000028580 Krtap19-9bQ99NG9 58 aa7.88□□□□□ -1.15
Ccdc34-201ENSMUST00000028580 Lce1a2Q9D1K4 149 aa7.85□□□□□ -1.15
Ccdc34-201ENSMUST00000028580 Krtap9-5A2A5X3 358 aa7.83□□□□□ -1.16
Ccdc34-201ENSMUST00000028580 2310046K23RikA0A0A6YVW6 87 aa7.8□□□□□ -1.16
Ccdc34-201ENSMUST00000028580 Gm10061D3Z714 54 aa7.8□□□□□ -1.16
Ccdc34-201ENSMUST00000028580 Gm11555B1AQ89 175 aa7.73□□□□□ -1.17
Ccdc34-201ENSMUST00000028580 A030005K14RikA0A1Y7VNY1 122 aa7.69□□□□□ -1.18
Ccdc34-201ENSMUST00000028580 Gm9112A2AI92 75 aa7.64□□□□□ -1.19
Ccdc34-201ENSMUST00000028580 A030005L19RikA0A1Y7VIU2 113 aa7.56□□□□□ -1.2
Ccdc34-201ENSMUST00000028580 Krtap9-3Q3V2C1 136 aa7.54□□□□□ -1.2
Ccdc34-201ENSMUST00000028580 Gm11563B1AQ90 168 aa7.5□□□□□ -1.21
Ccdc34-201ENSMUST00000028580 Krtap4-7Q9D732 168 aa7.5□□□□□ -1.21
Ccdc34-201ENSMUST00000028580 Lce1hQ9D6R3 140 aa7.48□□□□□ -1.21
Ccdc34-201ENSMUST00000028580 Muc5bE9Q5I3 4800 aa7.47□□□□□ -1.21
Ccdc34-201ENSMUST00000028580 Gm6358A0A087WPH4 74 aa7.43□□□□□ -1.22
Ccdc34-201ENSMUST00000028580 Mt2P02798 61 aa7.38□□□□□ -1.23
Ccdc34-201ENSMUST00000028580 Gm11569B1AQB1 180 aa7.35□□□□□ -1.23
Ccdc34-201ENSMUST00000028580 Gm7544A0A1Y7VJ58 118 aa7.08□□□□□ -1.28
Ccdc34-201ENSMUST00000028580 Lce1dQ9D731 133 aa6.98□□□□□ -1.29
Ccdc34-201ENSMUST00000028580 A0A1Y7VJ07 166 aa6.96□□□□□ -1.29
Ccdc34-201ENSMUST00000028580 Sprr2gO70558 76 aa6.96□□□□□ -1.29
Ccdc34-201ENSMUST00000028580 Krtap22-2J3QNX6 67 aa6.95□□□□□ -1.3
Ccdc34-201ENSMUST00000028580 Sprr2dO70555 85 aa6.86□□□□□ -1.31
Ccdc34-201ENSMUST00000028580 4933428G20RikQ9D3X4 101 aa6.79□□□□□ -1.32
Ccdc34-201ENSMUST00000028580 Lce1eQ9D139 143 aa6.77□□□□□ -1.33
Ccdc34-201ENSMUST00000028580 Gm11938Q9D3H4 131 aa6.77□□□□□ -1.33
Ccdc34-201ENSMUST00000028580 Gm10272F7CZ33 110 aa6.77□□□□□ -1.33
Ccdc34-201ENSMUST00000028580 A030014E15RikA0A1Y7VJV2 120 aa6.73□□□□□ -1.33
Ccdc34-201ENSMUST00000028580 Mdn1A2ANY6 5589 aaKnown RBP6.72□□□□□ -1.33
Ccdc34-201ENSMUST00000028580 Gm11562A0PK51 136 aa6.67□□□□□ -1.34
Ccdc34-201ENSMUST00000028580 Krtap4-6Q3V4B7 195 aa6.67□□□□□ -1.34
Ccdc34-201ENSMUST00000028580 Lce1gQ9D195 139 aa6.65□□□□□ -1.34
Ccdc34-201ENSMUST00000028580 Krtap4-2B1AQ85 167 aa6.59□□□□□ -1.35
Ccdc34-201ENSMUST00000028580 Gm11596B1AQB0 205 aa6.48□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 112.5 ms