RNA–Protein interactions for RNA: ENSMUST00000027068.10

Tram1-201, Transcript of Translocating chain-associated membrane protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tram1, Length 2,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1-201ENSMUST00000027068 Krtap3-1A2A591 98 aa9.73□□□□□ -0.85
Tram1-201ENSMUST00000027068 Abca13Q5SSE9 5034 aa9.66□□□□□ -0.86
Tram1-201ENSMUST00000027068 Dnah8Q91XQ0 4731 aa9.56□□□□□ -0.88
Tram1-201ENSMUST00000027068 Gm17416Q30KP4 66 aa9.56□□□□□ -0.88
Tram1-201ENSMUST00000027068 Gm9112A2AI92 75 aa9.52□□□□□ -0.89
Tram1-201ENSMUST00000027068 Ryr2E9Q401 4966 aaKnown RBP9.5□□□□□ -0.89
Tram1-201ENSMUST00000027068 Gm19426M0QWC7 77 aa9.46□□□□□ -0.9
Tram1-201ENSMUST00000027068 2210017I01RikA0A0A6YVV1 95 aa9.45□□□□□ -0.9
Tram1-201ENSMUST00000027068 B930094E09RikQ8C4T2 136 aa9.41□□□□□ -0.9
Tram1-201ENSMUST00000027068 Gm19668J3QMD1 248 aa9.39□□□□□ -0.91
Tram1-201ENSMUST00000027068 2310057N15RikQ9D6T8 200 aa9.38□□□□□ -0.91
Tram1-201ENSMUST00000027068 Krtap7-1Q9D3I6 87 aa9.33□□□□□ -0.92
Tram1-201ENSMUST00000027068 BC029722A0A0N4SW31 51 aa9.28□□□□□ -0.92
Tram1-201ENSMUST00000027068 Krtap13-1Q8K198 168 aa9.28□□□□□ -0.92
Tram1-201ENSMUST00000027068 Ryr1E9PZQ0 5035 aa9.27□□□□□ -0.92
Tram1-201ENSMUST00000027068 Gm19402J3QJV4 266 aa9.18□□□□□ -0.94
Tram1-201ENSMUST00000027068 Kiaa1109A2AAE1 5005 aa9.13□□□□□ -0.95
Tram1-201ENSMUST00000027068 HydinQ80W93 5154 aa9.12□□□□□ -0.95
Tram1-201ENSMUST00000027068 Fam229aB2KGE5 128 aa9.1□□□□□ -0.95
Tram1-201ENSMUST00000027068 Lrp2A2ARV4 4660 aa9.06□□□□□ -0.96
Tram1-201ENSMUST00000027068 Gm10318A0A1W2P728 225 aa9.04□□□□□ -0.96
Tram1-201ENSMUST00000027068 Herc2Q4U2R1 4836 aa9□□□□□ -0.97
Tram1-201ENSMUST00000027068 Dnhd1D3Z2X2 4750 aa8.92□□□□□ -0.98
Tram1-201ENSMUST00000027068 Gm17402F6Z0L5 76 aa8.92□□□□□ -0.98
Tram1-201ENSMUST00000027068 Krtap1-5A2A590 122 aa8.91□□□□□ -0.98
Tram1-201ENSMUST00000027068 Spink7Q6IE32 76 aa8.91□□□□□ -0.98
Tram1-201ENSMUST00000027068 Crct1Q6PAI5 102 aa8.9□□□□□ -0.99
Tram1-201ENSMUST00000027068 Sec61bQ9CQS8 96 aaKnown RBP8.82□□□□□ -1
Tram1-201ENSMUST00000027068 Sprr2a3Q4KL71 83 aa8.8□□□□□ -1
Tram1-201ENSMUST00000027068 Sprr2a1Q9CQK8 83 aa8.8□□□□□ -1
Tram1-201ENSMUST00000027068 Gm40193A0A1B0GT39 78 aa8.79□□□□□ -1
Tram1-201ENSMUST00000027068 Birc6O88738 4882 aa8.71□□□□□ -1.01
Tram1-201ENSMUST00000027068 PcloQ9QYX7 5068 aa8.71□□□□□ -1.01
Tram1-201ENSMUST00000027068 Krtap16-3Q8C1I6 86 aa8.69□□□□□ -1.02
Tram1-201ENSMUST00000027068 Camk2n1Q6QWF9 78 aa8.56□□□□□ -1.04
Tram1-201ENSMUST00000027068 Krtap19-1Q925H2 87 aa8.51□□□□□ -1.05
Tram1-201ENSMUST00000027068 Krtap19-3Q925H6 87 aa8.46□□□□□ -1.06
Tram1-201ENSMUST00000027068 Krtap1-4Q3V2D6 188 aa8.38□□□□□ -1.07
Tram1-201ENSMUST00000027068 Ubr4A2AN08 5180 aa8.35□□□□□ -1.07
Tram1-201ENSMUST00000027068 ZanO88799 5376 aa8.28□□□□□ -1.08
Tram1-201ENSMUST00000027068 Herc1E9PZP8 4859 aa8.26□□□□□ -1.09
Tram1-201ENSMUST00000027068 Fat4Q2PZL6 4981 aa8.21□□□□□ -1.09
Tram1-201ENSMUST00000027068 4932415D10RikA0A1W2P6U8 4986 aa8.19□□□□□ -1.1
Tram1-201ENSMUST00000027068 Lce1jD3YUU5 139 aa8.18□□□□□ -1.1
Tram1-201ENSMUST00000027068 Lce1mQ9CR91 182 aa8.09□□□□□ -1.11
Tram1-201ENSMUST00000027068 Tnp1P10856 55 aa8.05□□□□□ -1.12
Tram1-201ENSMUST00000027068 Krtap12-1Q9Z287 130 aa7.96□□□□□ -1.13
Tram1-201ENSMUST00000027068 Krtap1-3A2A588 173 aa7.93□□□□□ -1.14
Tram1-201ENSMUST00000027068 Krtap19-9aF8WH65 55 aa7.92□□□□□ -1.14
Tram1-201ENSMUST00000027068 Ush2AQ2QI47 5193 aa7.92□□□□□ -1.14
Tram1-201ENSMUST00000027068 LorP18165 486 aa7.91□□□□□ -1.14
Tram1-201ENSMUST00000027068 Krtap17-1A2A5X6 109 aa7.9□□□□□ -1.14
Tram1-201ENSMUST00000027068 Hmcn2A2AJ76 5100 aa7.88□□□□□ -1.15
Tram1-201ENSMUST00000027068 Rnf213E9Q555 5152 aaKnown RBP7.8□□□□□ -1.16
Tram1-201ENSMUST00000027068 Gm18596A0A1W2P860 280 aa7.75□□□□□ -1.17
Tram1-201ENSMUST00000027068 Krtap8-1O08633 61 aa7.66□□□□□ -1.18
Tram1-201ENSMUST00000027068 Lce1iQ9D6P5 149 aa7.64□□□□□ -1.19
Tram1-201ENSMUST00000027068 Lce1a2Q9D1K4 149 aa7.61□□□□□ -1.19
Tram1-201ENSMUST00000027068 Krtap9-3Q3V2C1 136 aa7.59□□□□□ -1.19
Tram1-201ENSMUST00000027068 Gm9789Q8BIG3 52 aa7.58□□□□□ -1.2
Tram1-201ENSMUST00000027068 2310046K23RikA0A0A6YVW6 87 aa7.55□□□□□ -1.2
Tram1-201ENSMUST00000027068 Krtap19-9bQ99NG9 58 aa7.55□□□□□ -1.2
Tram1-201ENSMUST00000027068 Prm1P02319 51 aa7.5□□□□□ -1.21
Tram1-201ENSMUST00000027068 Gm7735D3YX18 52 aa7.48□□□□□ -1.21
Tram1-201ENSMUST00000027068 Krtap9-5A2A5X3 358 aa7.45□□□□□ -1.22
Tram1-201ENSMUST00000027068 Lce1hQ9D6R3 140 aa7.45□□□□□ -1.22
Tram1-201ENSMUST00000027068 Krtap19-2Q925I0 141 aa7.44□□□□□ -1.22
Tram1-201ENSMUST00000027068 SspoQ8CG65 4998 aa7.2□□□□□ -1.26
Tram1-201ENSMUST00000027068 Lce1dQ9D731 133 aa7.15□□□□□ -1.26
Tram1-201ENSMUST00000027068 Mt2P02798 61 aa7.04□□□□□ -1.28
Tram1-201ENSMUST00000027068 Gm6358A0A087WPH4 74 aa6.95□□□□□ -1.3
Tram1-201ENSMUST00000027068 Lce1eQ9D139 143 aa6.88□□□□□ -1.31
Tram1-201ENSMUST00000027068 Muc5bE9Q5I3 4800 aa6.83□□□□□ -1.32
Tram1-201ENSMUST00000027068 Gm10061D3Z714 54 aa6.8□□□□□ -1.32
Tram1-201ENSMUST00000027068 Sprr2gO70558 76 aa6.78□□□□□ -1.32
Tram1-201ENSMUST00000027068 Krtap31-1Q9D644 177 aa6.77□□□□□ -1.33
Tram1-201ENSMUST00000027068 Gm11938Q9D3H4 131 aa6.73□□□□□ -1.33
Tram1-201ENSMUST00000027068 Gm10272F7CZ33 110 aa6.72□□□□□ -1.33
Tram1-201ENSMUST00000027068 4933428G20RikQ9D3X4 101 aa6.7□□□□□ -1.34
Tram1-201ENSMUST00000027068 Sprr2dO70555 85 aa6.59□□□□□ -1.36
Tram1-201ENSMUST00000027068 Lce1cQ9D1C5 147 aa6.56□□□□□ -1.36
Tram1-201ENSMUST00000027068 Krtap22-2J3QNX6 67 aa6.54□□□□□ -1.36
Tram1-201ENSMUST00000027068 Mdn1A2ANY6 5589 aaKnown RBP6.51□□□□□ -1.37
Tram1-201ENSMUST00000027068 Gm11569B1AQB1 180 aa6.47□□□□□ -1.37
Tram1-201ENSMUST00000027068 Lce1fB9EJP6 147 aa6.32□□□□□ -1.4
Tram1-201ENSMUST00000027068 Lce1a1Q9CQH5 143 aa6.32□□□□□ -1.4
Tram1-201ENSMUST00000027068 Gm10100J3QK64 120 aa6.31□□□□□ -1.4
Tram1-201ENSMUST00000027068 Gm11562A0PK51 136 aa6.29□□□□□ -1.4
Tram1-201ENSMUST00000027068 Lce3bQ9CQM7 98 aa6.26□□□□□ -1.41
Tram1-201ENSMUST00000027068 Syne1Q6ZWR6 8799 aa6.18□□□□□ -1.42
Tram1-201ENSMUST00000027068 Gm10142J3KMP7 120 aa6.15□□□□□ -1.42
Tram1-201ENSMUST00000027068 Krtap19-4Q925H7 84 aa6.12□□□□□ -1.43
Tram1-201ENSMUST00000027068 Sprr2iO70560 76 aa6.09□□□□□ -1.43
Tram1-201ENSMUST00000027068 Krtap31-2Q8CAY5 177 aa6.02□□□□□ -1.45
Tram1-201ENSMUST00000027068 Lce3cQ91V05 98 aa6.02□□□□□ -1.45
Tram1-201ENSMUST00000027068 Lce3dE9Q8V1 98 aa5.97□□□□□ -1.45
Tram1-201ENSMUST00000027068 Krtap4-6Q3V4B7 195 aa5.92□□□□□ -1.46
Tram1-201ENSMUST00000027068 Lce1gQ9D195 139 aa5.9□□□□□ -1.47
Tram1-201ENSMUST00000027068 Krtap4-2B1AQ85 167 aa5.89□□□□□ -1.47
Tram1-201ENSMUST00000027068 Gm11555B1AQ89 175 aa5.89□□□□□ -1.47
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms