RNA–Protein interactions for RNA: ENSMUST00000025649.8

Ddb1-201, Transcript of DNA damage-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddb1, Length 4,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1-201ENSMUST00000025649 Hectd4E9Q2E4 4418 aa3.89□□□□□ -1.79
Ddb1-201ENSMUST00000025649 Lrp1Q91ZX7 4545 aaKnown RBP3.85□□□□□ -1.79
Ddb1-201ENSMUST00000025649 Birc6O88738 4882 aa3.85□□□□□ -1.79
Ddb1-201ENSMUST00000025649 Kmt2cQ8BRH4 4903 aa3.85□□□□□ -1.79
Ddb1-201ENSMUST00000025649 Fat3Q8BNA6 4555 aa3.85□□□□□ -1.79
Ddb1-201ENSMUST00000025649 Lce1mQ9CR91 182 aa3.84□□□□□ -1.79
Ddb1-201ENSMUST00000025649 B930094E09RikQ8C4T2 136 aa3.84□□□□□ -1.8
Ddb1-201ENSMUST00000025649 2210017I01RikA0A0A6YVV1 95 aa3.83□□□□□ -1.8
Ddb1-201ENSMUST00000025649 Gm20537G3UYK7 97 aa3.83□□□□□ -1.8
Ddb1-201ENSMUST00000025649 2310079G19RikQ9D6L6 185 aa3.82□□□□□ -1.8
Ddb1-201ENSMUST00000025649 Abca13Q5SSE9 5034 aa3.81□□□□□ -1.8
Ddb1-201ENSMUST00000025649 Mycbp2Q7TPH6 4711 aa3.8□□□□□ -1.8
Ddb1-201ENSMUST00000025649 Fat2Q5F226 4351 aa3.8□□□□□ -1.8
Ddb1-201ENSMUST00000025649 Gm18596A0A1W2P860 280 aa3.79□□□□□ -1.8
Ddb1-201ENSMUST00000025649 Ndufaf8A2AMZ4 74 aa3.79□□□□□ -1.8
Ddb1-201ENSMUST00000025649 Vps13bQ80TY5 3993 aa3.78□□□□□ -1.8
Ddb1-201ENSMUST00000025649 Dnhd1D3Z2X2 4750 aa3.77□□□□□ -1.81
Ddb1-201ENSMUST00000025649 Pkhd1l1Q80ZA4 4249 aa3.76□□□□□ -1.81
Ddb1-201ENSMUST00000025649 HydinQ80W93 5154 aa3.75□□□□□ -1.81
Ddb1-201ENSMUST00000025649 Gm17402F6Z0L5 76 aa3.74□□□□□ -1.81
Ddb1-201ENSMUST00000025649 Prm2P07978 107 aa3.74□□□□□ -1.81
Ddb1-201ENSMUST00000025649 Gm11939A2A592 99 aa3.73□□□□□ -1.81
Ddb1-201ENSMUST00000025649 Lrp2A2ARV4 4660 aa3.72□□□□□ -1.81
Ddb1-201ENSMUST00000025649 PcloQ9QYX7 5068 aa3.68□□□□□ -1.82
Ddb1-201ENSMUST00000025649 Gm9112A2AI92 75 aa3.66□□□□□ -1.82
Ddb1-201ENSMUST00000025649 Herc1E9PZP8 4859 aa3.63□□□□□ -1.83
Ddb1-201ENSMUST00000025649 Krtap13-1Q8K198 168 aa3.6□□□□□ -1.83
Ddb1-201ENSMUST00000025649 Gm19668J3QMD1 248 aa3.57□□□□□ -1.84
Ddb1-201ENSMUST00000025649 Prm1P02319 51 aa3.57□□□□□ -1.84
Ddb1-201ENSMUST00000025649 Crct1Q6PAI5 102 aa3.57□□□□□ -1.84
Ddb1-201ENSMUST00000025649 Gm10318A0A1W2P728 225 aa3.55□□□□□ -1.84
Ddb1-201ENSMUST00000025649 Krtap3-2Q9D638 99 aa3.55□□□□□ -1.84
Ddb1-201ENSMUST00000025649 Krtap3-3Q9D7P0 99 aa3.55□□□□□ -1.84
Ddb1-201ENSMUST00000025649 Gm7735D3YX18 52 aa3.54□□□□□ -1.84
Ddb1-201ENSMUST00000025649 Gm9789Q8BIG3 52 aa3.51□□□□□ -1.85
Ddb1-201ENSMUST00000025649 Krtap3-1A2A591 98 aa3.48□□□□□ -1.85
Ddb1-201ENSMUST00000025649 Ush2AQ2QI47 5193 aa3.47□□□□□ -1.85
Ddb1-201ENSMUST00000025649 4933428G20RikQ9D3X4 101 aa3.45□□□□□ -1.86
Ddb1-201ENSMUST00000025649 4932415D10RikA0A1W2P6U8 4986 aa3.43□□□□□ -1.86
Ddb1-201ENSMUST00000025649 LorP18165 486 aa3.42□□□□□ -1.86
Ddb1-201ENSMUST00000025649 Ubr4A2AN08 5180 aa3.4□□□□□ -1.87
Ddb1-201ENSMUST00000025649 Krtap1-3A2A588 173 aa3.39□□□□□ -1.87
Ddb1-201ENSMUST00000025649 Hmcn2A2AJ76 5100 aa3.37□□□□□ -1.87
Ddb1-201ENSMUST00000025649 Krtap16-3Q8C1I6 86 aa3.37□□□□□ -1.87
Ddb1-201ENSMUST00000025649 Krtap19-3Q925H6 87 aa3.35□□□□□ -1.87
Ddb1-201ENSMUST00000025649 Krtap19-1Q925H2 87 aa3.34□□□□□ -1.87
Ddb1-201ENSMUST00000025649 Gm19402J3QJV4 266 aa3.33□□□□□ -1.88
Ddb1-201ENSMUST00000025649 Krtap1-5A2A590 122 aa3.3□□□□□ -1.88
Ddb1-201ENSMUST00000025649 ZanO88799 5376 aa3.29□□□□□ -1.88
Ddb1-201ENSMUST00000025649 Krtap19-9aF8WH65 55 aa3.26□□□□□ -1.89
Ddb1-201ENSMUST00000025649 Fat4Q2PZL6 4981 aa3.26□□□□□ -1.89
Ddb1-201ENSMUST00000025649 Krtap8-1O08633 61 aa3.25□□□□□ -1.89
Ddb1-201ENSMUST00000025649 Sprr2a3Q4KL71 83 aa3.24□□□□□ -1.89
Ddb1-201ENSMUST00000025649 Sprr2a1Q9CQK8 83 aa3.24□□□□□ -1.89
Ddb1-201ENSMUST00000025649 Gm6358A0A087WPH4 74 aa3.24□□□□□ -1.89
Ddb1-201ENSMUST00000025649 Krtap1-4Q3V2D6 188 aa3.22□□□□□ -1.89
Ddb1-201ENSMUST00000025649 Sprr2kO70562 68 aa3.19□□□□□ -1.9
Ddb1-201ENSMUST00000025649 Gm10061D3Z714 54 aa3.17□□□□□ -1.9
Ddb1-201ENSMUST00000025649 Krtap7-1Q9D3I6 87 aa3.16□□□□□ -1.9
Ddb1-201ENSMUST00000025649 Krtap19-9bQ99NG9 58 aa3.15□□□□□ -1.9
Ddb1-201ENSMUST00000025649 Krtap12-1Q9Z287 130 aa3.15□□□□□ -1.91
Ddb1-201ENSMUST00000025649 Rnf213E9Q555 5152 aaKnown RBP3.13□□□□□ -1.91
Ddb1-201ENSMUST00000025649 Gm11569B1AQB1 180 aa3.09□□□□□ -1.92
Ddb1-201ENSMUST00000025649 Krtap9-5A2A5X3 358 aa3.06□□□□□ -1.92
Ddb1-201ENSMUST00000025649 Lce1jD3YUU5 139 aa3.03□□□□□ -1.92
Ddb1-201ENSMUST00000025649 Sprr2gO70558 76 aa3.03□□□□□ -1.92
Ddb1-201ENSMUST00000025649 Krtap19-2Q925I0 141 aa3.02□□□□□ -1.93
Ddb1-201ENSMUST00000025649 SspoQ8CG65 4998 aa3□□□□□ -1.93
Ddb1-201ENSMUST00000025649 Krtap4-2B1AQ85 167 aa2.97□□□□□ -1.93
Ddb1-201ENSMUST00000025649 Krtap17-1A2A5X6 109 aa2.94□□□□□ -1.94
Ddb1-201ENSMUST00000025649 Lce1gQ9D195 139 aa2.93□□□□□ -1.94
Ddb1-201ENSMUST00000025649 Mdn1A2ANY6 5589 aaKnown RBP2.92□□□□□ -1.94
Ddb1-201ENSMUST00000025649 Muc5bE9Q5I3 4800 aa2.86□□□□□ -1.95
Ddb1-201ENSMUST00000025649 Gm11562A0PK51 136 aa2.86□□□□□ -1.95
Ddb1-201ENSMUST00000025649 Krtap4-6Q3V4B7 195 aa2.86□□□□□ -1.95
Ddb1-201ENSMUST00000025649 Lce3bQ9CQM7 98 aa2.85□□□□□ -1.95
Ddb1-201ENSMUST00000025649 Lce1iQ9D6P5 149 aa2.83□□□□□ -1.96
Ddb1-201ENSMUST00000025649 Krtap22-2J3QNX6 67 aa2.82□□□□□ -1.96
Ddb1-201ENSMUST00000025649 Gm11596B1AQB0 205 aa2.82□□□□□ -1.96
Ddb1-201ENSMUST00000025649 Mt2P02798 61 aa2.82□□□□□ -1.96
Ddb1-201ENSMUST00000025649 Lce3cQ91V05 98 aa2.81□□□□□ -1.96
Ddb1-201ENSMUST00000025649 Syne2Q6ZWQ0 6874 aaKnown RBP2.81□□□□□ -1.96
Ddb1-201ENSMUST00000025649 Krtap4-1Q3UUY3 169 aa2.79□□□□□ -1.96
Ddb1-201ENSMUST00000025649 Lce1a2Q9D1K4 149 aa2.78□□□□□ -1.96
Ddb1-201ENSMUST00000025649 Gm10100J3QK64 120 aa2.75□□□□□ -1.97
Ddb1-201ENSMUST00000025649 2310046K23RikA0A0A6YVW6 87 aa2.75□□□□□ -1.97
Ddb1-201ENSMUST00000025649 Gm11555B1AQ89 175 aa2.75□□□□□ -1.97
Ddb1-201ENSMUST00000025649 Gm10272F7CZ33 110 aa2.75□□□□□ -1.97
Ddb1-201ENSMUST00000025649 Gm11564A2A4L9 201 aa2.72□□□□□ -1.97
Ddb1-201ENSMUST00000025649 Gm11563B1AQ90 168 aa2.72□□□□□ -1.97
Ddb1-201ENSMUST00000025649 Gm11595B1AQA7 289 aa2.72□□□□□ -1.97
Ddb1-201ENSMUST00000025649 Krtap4-8B1AQA8 209 aa2.72□□□□□ -1.97
Ddb1-201ENSMUST00000025649 Gm38119A0A0A6YX29 146 aa2.7□□□□□ -1.98
Ddb1-201ENSMUST00000025649 Lce3eF8VQJ0 98 aa2.7□□□□□ -1.98
Ddb1-201ENSMUST00000025649 Lce3fQ6PAI4 98 aa2.7□□□□□ -1.98
Ddb1-201ENSMUST00000025649 Lce3dE9Q8V1 98 aa2.68□□□□□ -1.98
Ddb1-201ENSMUST00000025649 Mt4P47945 62 aa2.67□□□□□ -1.98
Ddb1-201ENSMUST00000025649 Sprr2iO70560 76 aa2.67□□□□□ -1.98
Ddb1-201ENSMUST00000025649 Krtap4-9B1AQA9 244 aa2.66□□□□□ -1.98
Ddb1-201ENSMUST00000025649 Gm10142J3KMP7 120 aa2.66□□□□□ -1.98
Retrieved 100 of 22,080 RNA–protein pairs in 132.8 ms