RNA–Protein interactions for RNA: ENSMUST00000017153.3

Sdc4-201, Transcript of Syndecan-4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc4, Length 2,458 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4-201ENSMUST00000017153 Fam229aB2KGE5 128 aa6.38□□□□□ -1.39
Sdc4-201ENSMUST00000017153 Gm9955Q8CEJ8 102 aa6.38□□□□□ -1.39
Sdc4-201ENSMUST00000017153 Krtap7-1Q9D3I6 87 aa6.37□□□□□ -1.39
Sdc4-201ENSMUST00000017153 Vps13bQ80TY5 3993 aa6.36□□□□□ -1.39
Sdc4-201ENSMUST00000017153 Lrp1Q91ZX7 4545 aaKnown RBP6.32□□□□□ -1.4
Sdc4-201ENSMUST00000017153 2210017I01RikA0A0A6YVV1 95 aa6.31□□□□□ -1.4
Sdc4-201ENSMUST00000017153 Gm9736A0A1W2P7N1 277 aa6.3□□□□□ -1.4
Sdc4-201ENSMUST00000017153 Kmt2cQ8BRH4 4903 aa6.29□□□□□ -1.4
Sdc4-201ENSMUST00000017153 Rpl37Q9D823 97 aa6.29□□□□□ -1.4
Sdc4-201ENSMUST00000017153 Gm19668J3QMD1 248 aa6.28□□□□□ -1.4
Sdc4-201ENSMUST00000017153 A0A1Y7VLE6 161 aa6.26□□□□□ -1.41
Sdc4-201ENSMUST00000017153 Dnah8Q91XQ0 4731 aa6.25□□□□□ -1.41
Sdc4-201ENSMUST00000017153 Gm17606F6ZL36 78 aa6.22□□□□□ -1.41
Sdc4-201ENSMUST00000017153 Lce1mQ9CR91 182 aa6.22□□□□□ -1.41
Sdc4-201ENSMUST00000017153 Krtap31-1Q9D644 177 aa6.21□□□□□ -1.41
Sdc4-201ENSMUST00000017153 Birc6O88738 4882 aa6.19□□□□□ -1.42
Sdc4-201ENSMUST00000017153 Gm40193A0A1B0GT39 78 aa6.19□□□□□ -1.42
Sdc4-201ENSMUST00000017153 Abca13Q5SSE9 5034 aa6.17□□□□□ -1.42
Sdc4-201ENSMUST00000017153 Fat3Q8BNA6 4555 aa6.16□□□□□ -1.42
Sdc4-201ENSMUST00000017153 Krtap28-13A0A087WQP5 138 aa6.16□□□□□ -1.42
Sdc4-201ENSMUST00000017153 Herc2Q4U2R1 4836 aa6.15□□□□□ -1.42
Sdc4-201ENSMUST00000017153 Gm18596A0A1W2P860 280 aa6.15□□□□□ -1.43
Sdc4-201ENSMUST00000017153 Gm17416Q30KP4 66 aa6.13□□□□□ -1.43
Sdc4-201ENSMUST00000017153 Kiaa1109A2AAE1 5005 aa6.11□□□□□ -1.43
Sdc4-201ENSMUST00000017153 Krtap3-1A2A591 98 aa6.1□□□□□ -1.43
Sdc4-201ENSMUST00000017153 Mycbp2Q7TPH6 4711 aa6.1□□□□□ -1.43
Sdc4-201ENSMUST00000017153 Dnhd1D3Z2X2 4750 aa6.07□□□□□ -1.44
Sdc4-201ENSMUST00000017153 PcloQ9QYX7 5068 aa6.07□□□□□ -1.44
Sdc4-201ENSMUST00000017153 Krtap4-1Q3UUY3 169 aa6.07□□□□□ -1.44
Sdc4-201ENSMUST00000017153 HydinQ80W93 5154 aa6.04□□□□□ -1.44
Sdc4-201ENSMUST00000017153 A030005L19RikA0A1Y7VIU2 113 aa6.01□□□□□ -1.45
Sdc4-201ENSMUST00000017153 Krtap31-2Q8CAY5 177 aa5.97□□□□□ -1.45
Sdc4-201ENSMUST00000017153 Gm19426M0QWC7 77 aa5.93□□□□□ -1.46
Sdc4-201ENSMUST00000017153 Herc1E9PZP8 4859 aa5.91□□□□□ -1.46
Sdc4-201ENSMUST00000017153 Krtap17-1A2A5X6 109 aa5.9□□□□□ -1.46
Sdc4-201ENSMUST00000017153 A030005K14RikA0A1Y7VNY1 122 aa5.88□□□□□ -1.47
Sdc4-201ENSMUST00000017153 Krtap13-1Q8K198 168 aa5.85□□□□□ -1.47
Sdc4-201ENSMUST00000017153 Lrp2A2ARV4 4660 aa5.83□□□□□ -1.48
Sdc4-201ENSMUST00000017153 BC029722A0A0N4SW31 51 aa5.83□□□□□ -1.48
Sdc4-201ENSMUST00000017153 Gm11555B1AQ89 175 aa5.75□□□□□ -1.49
Sdc4-201ENSMUST00000017153 Krtap1-5A2A590 122 aa5.71□□□□□ -1.5
Sdc4-201ENSMUST00000017153 Gm17402F6Z0L5 76 aa5.69□□□□□ -1.5
Sdc4-201ENSMUST00000017153 Prm1P02319 51 aa5.69□□□□□ -1.5
Sdc4-201ENSMUST00000017153 Gm7735D3YX18 52 aa5.67□□□□□ -1.5
Sdc4-201ENSMUST00000017153 4932415D10RikA0A1W2P6U8 4986 aa5.65□□□□□ -1.5
Sdc4-201ENSMUST00000017153 Gm11563B1AQ90 168 aa5.64□□□□□ -1.51
Sdc4-201ENSMUST00000017153 Krtap4-7Q9D732 168 aa5.64□□□□□ -1.51
Sdc4-201ENSMUST00000017153 Gm7544A0A1Y7VJ58 118 aa5.63□□□□□ -1.51
Sdc4-201ENSMUST00000017153 Gm19402J3QJV4 266 aa5.62□□□□□ -1.51
Sdc4-201ENSMUST00000017153 Ubr4A2AN08 5180 aa5.58□□□□□ -1.52
Sdc4-201ENSMUST00000017153 Ush2AQ2QI47 5193 aa5.56□□□□□ -1.52
Sdc4-201ENSMUST00000017153 Krtap16-3Q8C1I6 86 aa5.55□□□□□ -1.52
Sdc4-201ENSMUST00000017153 Sprr2a3Q4KL71 83 aa5.54□□□□□ -1.52
Sdc4-201ENSMUST00000017153 Gm9789Q8BIG3 52 aa5.54□□□□□ -1.52
Sdc4-201ENSMUST00000017153 Sprr2a1Q9CQK8 83 aa5.54□□□□□ -1.52
Sdc4-201ENSMUST00000017153 Gm10318A0A1W2P728 225 aa5.54□□□□□ -1.52
Sdc4-201ENSMUST00000017153 Spink7Q6IE32 76 aa5.52□□□□□ -1.53
Sdc4-201ENSMUST00000017153 Crct1Q6PAI5 102 aa5.52□□□□□ -1.53
Sdc4-201ENSMUST00000017153 Krtap19-1Q925H2 87 aa5.47□□□□□ -1.53
Sdc4-201ENSMUST00000017153 Hmcn2A2AJ76 5100 aa5.44□□□□□ -1.54
Sdc4-201ENSMUST00000017153 Krtap19-3Q925H6 87 aa5.42□□□□□ -1.54
Sdc4-201ENSMUST00000017153 Gm11562A0PK51 136 aa5.39□□□□□ -1.55
Sdc4-201ENSMUST00000017153 Krtap1-4Q3V2D6 188 aa5.34□□□□□ -1.55
Sdc4-201ENSMUST00000017153 A0A1Y7VJ07 166 aa5.33□□□□□ -1.56
Sdc4-201ENSMUST00000017153 Krtap1-3A2A588 173 aa5.31□□□□□ -1.56
Sdc4-201ENSMUST00000017153 ZanO88799 5376 aa5.2□□□□□ -1.58
Sdc4-201ENSMUST00000017153 A030014E15RikA0A1Y7VJV2 120 aa5.17□□□□□ -1.58
Sdc4-201ENSMUST00000017153 Lce1jD3YUU5 139 aa5.14□□□□□ -1.59
Sdc4-201ENSMUST00000017153 Tnp1P10856 55 aa5.14□□□□□ -1.59
Sdc4-201ENSMUST00000017153 LorP18165 486 aa5.13□□□□□ -1.59
Sdc4-201ENSMUST00000017153 Krtap4-2B1AQ85 167 aa5.09□□□□□ -1.59
Sdc4-201ENSMUST00000017153 Krtap12-1Q9Z287 130 aa5.08□□□□□ -1.6
Sdc4-201ENSMUST00000017153 Krtap19-9aF8WH65 55 aa5.07□□□□□ -1.6
Sdc4-201ENSMUST00000017153 Rnf213E9Q555 5152 aaKnown RBP5.07□□□□□ -1.6
Sdc4-201ENSMUST00000017153 A0A286YCP9 139 aa5.07□□□□□ -1.6
Sdc4-201ENSMUST00000017153 Fat4Q2PZL6 4981 aa5.06□□□□□ -1.6
Sdc4-201ENSMUST00000017153 Lce1gQ9D195 139 aa4.94□□□□□ -1.62
Sdc4-201ENSMUST00000017153 A030003K21RikA0A1Y7VIM3 128 aa4.93□□□□□ -1.62
Sdc4-201ENSMUST00000017153 Gm6217A0A1Y7VJK9 128 aa4.93□□□□□ -1.62
Sdc4-201ENSMUST00000017153 2310046K23RikA0A0A6YVW6 87 aa4.91□□□□□ -1.62
Sdc4-201ENSMUST00000017153 Gm11569B1AQB1 180 aa4.9□□□□□ -1.62
Sdc4-201ENSMUST00000017153 Gm10061D3Z714 54 aa4.88□□□□□ -1.63
Sdc4-201ENSMUST00000017153 Syne2Q6ZWQ0 6874 aaKnown RBP4.87□□□□□ -1.63
Sdc4-201ENSMUST00000017153 SspoQ8CG65 4998 aa4.87□□□□□ -1.63
Sdc4-201ENSMUST00000017153 Krtap8-1O08633 61 aa4.87□□□□□ -1.63
Sdc4-201ENSMUST00000017153 Lce1iQ9D6P5 149 aa4.82□□□□□ -1.64
Sdc4-201ENSMUST00000017153 Krtap19-2Q925I0 141 aa4.82□□□□□ -1.64
Sdc4-201ENSMUST00000017153 Krtap19-9bQ99NG9 58 aa4.79□□□□□ -1.64
Sdc4-201ENSMUST00000017153 Lce1a2Q9D1K4 149 aa4.79□□□□□ -1.64
Sdc4-201ENSMUST00000017153 Krtap9-5A2A5X3 358 aa4.77□□□□□ -1.65
Sdc4-201ENSMUST00000017153 Lce1dQ9D731 133 aa4.72□□□□□ -1.65
Sdc4-201ENSMUST00000017153 Gm11596B1AQB0 205 aa4.72□□□□□ -1.65
Sdc4-201ENSMUST00000017153 Krtap9-3Q3V2C1 136 aa4.64□□□□□ -1.67
Sdc4-201ENSMUST00000017153 Lce1hQ9D6R3 140 aa4.6□□□□□ -1.67
Sdc4-201ENSMUST00000017153 4933428G20RikQ9D3X4 101 aa4.58□□□□□ -1.68
Sdc4-201ENSMUST00000017153 Krtap4-6Q3V4B7 195 aa4.56□□□□□ -1.68
Sdc4-201ENSMUST00000017153 Muc5bE9Q5I3 4800 aa4.55□□□□□ -1.68
Sdc4-201ENSMUST00000017153 Gm6358A0A087WPH4 74 aa4.54□□□□□ -1.68
Sdc4-201ENSMUST00000017153 Gm10272F7CZ33 110 aa4.5□□□□□ -1.69
Sdc4-201ENSMUST00000017153 Mt2P02798 61 aa4.49□□□□□ -1.69
Retrieved 100 of 22,080 RNA–protein pairs in 57.8 ms