RNA–Protein interactions for RNA: ENSMUST00000011877.12

Sptbn1-202, Transcript of Spectrin beta chain, non-erythrocytic 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sptbn1, Length 8,238 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1-202ENSMUST00000011877 BsnO88737 3942 aa3.69□□□□□ -1.82
Sptbn1-202ENSMUST00000011877 Gm10272F7CZ33 110 aa3.68□□□□□ -1.82
Sptbn1-202ENSMUST00000011877 Krtap9-5A2A5X3 358 aa3.67□□□□□ -1.82
Sptbn1-202ENSMUST00000011877 Gm10100J3QK64 120 aa3.67□□□□□ -1.82
Sptbn1-202ENSMUST00000011877 Csmd3Q80T79 3707 aa3.65□□□□□ -1.82
Sptbn1-202ENSMUST00000011877 LystP97412 3788 aa3.64□□□□□ -1.83
Sptbn1-202ENSMUST00000011877 Lce3aQ497I5 98 aa3.64□□□□□ -1.83
Sptbn1-202ENSMUST00000011877 Lce1jD3YUU5 139 aa3.61□□□□□ -1.83
Sptbn1-202ENSMUST00000011877 Lce1gQ9D195 139 aa3.61□□□□□ -1.83
Sptbn1-202ENSMUST00000011877 Lce1iQ9D6P5 149 aa3.61□□□□□ -1.83
Sptbn1-202ENSMUST00000011877 Lce1hQ9D6R3 140 aa3.61□□□□□ -1.83
Sptbn1-202ENSMUST00000011877 Krtap16-3Q8C1I6 86 aa3.6□□□□□ -1.83
Sptbn1-202ENSMUST00000011877 Sprr2eO70556 76 aa3.59□□□□□ -1.83
Sptbn1-202ENSMUST00000011877 Gm10142J3KMP7 120 aa3.59□□□□□ -1.83
Sptbn1-202ENSMUST00000011877 Prm1P02319 51 aa3.58□□□□□ -1.84
Sptbn1-202ENSMUST00000011877 Krtap22-2J3QNX6 67 aa3.55□□□□□ -1.84
Sptbn1-202ENSMUST00000011877 Muc4Q8JZM8 3443 aa3.55□□□□□ -1.84
Sptbn1-202ENSMUST00000011877 Hspg2Q05793 3707 aaKnown RBP3.55□□□□□ -1.84
Sptbn1-202ENSMUST00000011877 Gm10024A0A0A0MQA4 119 aa3.53□□□□□ -1.84
Sptbn1-202ENSMUST00000011877 Krtap19-3Q925H6 87 aa3.53□□□□□ -1.84
Sptbn1-202ENSMUST00000011877 Xirp2Q4U4S6 3784 aa3.53□□□□□ -1.84
Sptbn1-202ENSMUST00000011877 Lce1fB9EJP6 147 aa3.52□□□□□ -1.85
Sptbn1-202ENSMUST00000011877 Lce1cQ9D1C5 147 aa3.52□□□□□ -1.85
Sptbn1-202ENSMUST00000011877 Lce1lQ9D1G7 135 aa3.52□□□□□ -1.85
Sptbn1-202ENSMUST00000011877 Lce1dQ9D731 133 aa3.52□□□□□ -1.85
Sptbn1-202ENSMUST00000011877 CubnQ9JLB4 3623 aa3.51□□□□□ -1.85
Sptbn1-202ENSMUST00000011877 Lce1bQ9D149 137 aa3.5□□□□□ -1.85
Sptbn1-202ENSMUST00000011877 Krtap31-2Q8CAY5 177 aa3.49□□□□□ -1.85
Sptbn1-202ENSMUST00000011877 Svep1A2AVA0 3567 aa3.48□□□□□ -1.85
Sptbn1-202ENSMUST00000011877 Dnah10D3YYQ8 4591 aa3.48□□□□□ -1.85
Sptbn1-202ENSMUST00000011877 Dnah14A0A140LIJ4 4489 aa3.46□□□□□ -1.86
Sptbn1-202ENSMUST00000011877 Mt2P02798 61 aa3.45□□□□□ -1.86
Sptbn1-202ENSMUST00000011877 Dnah5Q8VHE6 4621 aa3.45□□□□□ -1.86
Sptbn1-202ENSMUST00000011877 Stard9Q80TF6 4561 aa3.45□□□□□ -1.86
Sptbn1-202ENSMUST00000011877 Vps13dB1ART2 4390 aa3.43□□□□□ -1.86
Sptbn1-202ENSMUST00000011877 Lce1eQ9D139 143 aa3.43□□□□□ -1.86
Sptbn1-202ENSMUST00000011877 PlecQ9QXS1 4691 aaKnown RBP3.4□□□□□ -1.86
Sptbn1-202ENSMUST00000011877 Dnah7bL7N1Y0 4068 aa3.39□□□□□ -1.87
Sptbn1-202ENSMUST00000011877 Dnah2P0C6F1 4456 aa3.37□□□□□ -1.87
Sptbn1-202ENSMUST00000011877 Fat1A0A1L1SQU7 4645 aa3.36□□□□□ -1.87
Sptbn1-202ENSMUST00000011877 Krtap19-4Q925H7 84 aa3.35□□□□□ -1.87
Sptbn1-202ENSMUST00000011877 Krtap19-2Q925I0 141 aa3.35□□□□□ -1.87
Sptbn1-202ENSMUST00000011877 Gm7735D3YX18 52 aa3.35□□□□□ -1.87
Sptbn1-202ENSMUST00000011877 Krtap31-1Q9D644 177 aa3.33□□□□□ -1.88
Sptbn1-202ENSMUST00000011877 Dnah7cA0A087WR13 4024 aa3.32□□□□□ -1.88
Sptbn1-202ENSMUST00000011877 Vps13bQ80TY5 3993 aa3.3□□□□□ -1.88
Sptbn1-202ENSMUST00000011877 TnxbO35452 4006 aa3.3□□□□□ -1.88
Sptbn1-202ENSMUST00000011877 Dnah7aE9Q0T8 4024 aa3.3□□□□□ -1.88
Sptbn1-202ENSMUST00000011877 Dnah3Q8BW94 4083 aa3.29□□□□□ -1.88
Sptbn1-202ENSMUST00000011877 Gm11569B1AQB1 180 aa3.27□□□□□ -1.89
Sptbn1-202ENSMUST00000011877 Krtap4-2B1AQ85 167 aa3.27□□□□□ -1.89
Sptbn1-202ENSMUST00000011877 Krtap19-1Q925H2 87 aa3.26□□□□□ -1.89
Sptbn1-202ENSMUST00000011877 Mt4P47945 62 aa3.25□□□□□ -1.89
Sptbn1-202ENSMUST00000011877 Dnah1E9Q8T7 4250 aa3.25□□□□□ -1.89
Sptbn1-202ENSMUST00000011877 Dnah6E9Q0B6 4144 aa3.24□□□□□ -1.89
Sptbn1-202ENSMUST00000011877 Dnhd1D3Z2X2 4750 aa3.24□□□□□ -1.89
Sptbn1-202ENSMUST00000011877 Krtap9-3Q3V2C1 136 aa3.22□□□□□ -1.89
Sptbn1-202ENSMUST00000011877 Dync2h1Q45VK7 4306 aa3.22□□□□□ -1.89
Sptbn1-202ENSMUST00000011877 Kmt2aP55200 3966 aa3.21□□□□□ -1.89
Sptbn1-202ENSMUST00000011877 Gm9789Q8BIG3 52 aa3.21□□□□□ -1.9
Sptbn1-202ENSMUST00000011877 Sprr2hO70559 108 aa3.21□□□□□ -1.9
Sptbn1-202ENSMUST00000011877 PrkdcP97313 4128 aa3.2□□□□□ -1.9
Sptbn1-202ENSMUST00000011877 Lrp1Q91ZX7 4545 aaKnown RBP3.2□□□□□ -1.9
Sptbn1-202ENSMUST00000011877 Gm10061D3Z714 54 aa3.19□□□□□ -1.9
Sptbn1-202ENSMUST00000011877 SacsQ9JLC8 4582 aa3.19□□□□□ -1.9
Sptbn1-202ENSMUST00000011877 Dnah17Q69Z23 4481 aa3.19□□□□□ -1.9
Sptbn1-202ENSMUST00000011877 ApobE9Q414 4505 aa3.18□□□□□ -1.9
Sptbn1-202ENSMUST00000011877 Pkd1O08852 4293 aa3.17□□□□□ -1.9
Sptbn1-202ENSMUST00000011877 Krtap1-3A2A588 173 aa3.17□□□□□ -1.9
Sptbn1-202ENSMUST00000011877 Fras1Q80T14 4010 aa3.15□□□□□ -1.91
Sptbn1-202ENSMUST00000011877 Dync1h1Q9JHU4 4644 aaKnown RBP3.13□□□□□ -1.91
Sptbn1-202ENSMUST00000011877 Dnah9B1AR51 4484 aa3.11□□□□□ -1.91
Sptbn1-202ENSMUST00000011877 Krtap4-6Q3V4B7 195 aa3.1□□□□□ -1.91
Sptbn1-202ENSMUST00000011877 Sprr2dO70555 85 aa3.1□□□□□ -1.91
Sptbn1-202ENSMUST00000011877 Dnah8Q91XQ0 4731 aa3.07□□□□□ -1.92
Sptbn1-202ENSMUST00000011877 Mt3P28184 68 aa3.07□□□□□ -1.92
Sptbn1-202ENSMUST00000011877 Mycbp2Q7TPH6 4711 aa3.05□□□□□ -1.92
Sptbn1-202ENSMUST00000011877 Herc1E9PZP8 4859 aa3.05□□□□□ -1.92
Sptbn1-202ENSMUST00000011877 Dnah11E9Q7N9 4488 aa3.03□□□□□ -1.92
Sptbn1-202ENSMUST00000011877 Lrp1bQ9JI18 4599 aa3□□□□□ -1.93
Sptbn1-202ENSMUST00000011877 Hectd4E9Q2E4 4418 aa2.98□□□□□ -1.93
Sptbn1-202ENSMUST00000011877 Gm11596B1AQB0 205 aa2.98□□□□□ -1.93
Sptbn1-202ENSMUST00000011877 Fat3Q8BNA6 4555 aa2.97□□□□□ -1.93
Sptbn1-202ENSMUST00000011877 2300003K06RikA2A4M0 262 aa2.97□□□□□ -1.93
Sptbn1-202ENSMUST00000011877 Krtap4-7Q9D732 168 aa2.96□□□□□ -1.93
Sptbn1-202ENSMUST00000011877 Krtap4-1Q3UUY3 169 aa2.96□□□□□ -1.94
Sptbn1-202ENSMUST00000011877 Ryr1E9PZQ0 5035 aa2.93□□□□□ -1.94
Sptbn1-202ENSMUST00000011877 Herc2Q4U2R1 4836 aa2.93□□□□□ -1.94
Sptbn1-202ENSMUST00000011877 Gm11564A2A4L9 201 aa2.93□□□□□ -1.94
Sptbn1-202ENSMUST00000011877 Gm11563B1AQ90 168 aa2.93□□□□□ -1.94
Sptbn1-202ENSMUST00000011877 Gm11595B1AQA7 289 aa2.93□□□□□ -1.94
Sptbn1-202ENSMUST00000011877 Krtap4-8B1AQA8 209 aa2.93□□□□□ -1.94
Sptbn1-202ENSMUST00000011877 Gm11562A0PK51 136 aa2.9□□□□□ -1.94
Sptbn1-202ENSMUST00000011877 Gm11938Q9D3H4 131 aa2.9□□□□□ -1.95
Sptbn1-202ENSMUST00000011877 Krtap4-9B1AQA9 244 aa2.89□□□□□ -1.95
Sptbn1-202ENSMUST00000011877 Sprr2bO70554 98 aa2.89□□□□□ -1.95
Sptbn1-202ENSMUST00000011877 Pkhd1E9PZ36 4059 aa2.88□□□□□ -1.95
Sptbn1-202ENSMUST00000011877 Lce1a1Q9CQH5 143 aa2.87□□□□□ -1.95
Sptbn1-202ENSMUST00000011877 Lce1a2Q9D1K4 149 aa2.87□□□□□ -1.95
Sptbn1-202ENSMUST00000011877 Krtap4-13Q9D7P3 165 aa2.82□□□□□ -1.96
Retrieved 100 of 22,080 RNA–protein pairs in 127.5 ms