RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 GGA2P38817 585 aaKnown RBP3.33□□□□□ -1.88
snR42snR42 UBP7P40453 1071 aa3.33□□□□□ -1.88
snR42snR42 SAP185P40856 1058 aa3.33□□□□□ -1.88
snR42snR42 UFE1P41834 346 aa3.33□□□□□ -1.88
snR42snR42 ZAP1P47043 880 aa3.33□□□□□ -1.88
snR42snR42 HOP2P53187 214 aa3.33□□□□□ -1.88
snR42snR42 COQ6P53318 479 aa3.33□□□□□ -1.88
snR42snR42 DOS2P54858 310 aa3.33□□□□□ -1.88
snR42snR42 ARO80Q04052 950 aa3.33□□□□□ -1.88
snR42snR42 PPM1Q04081 328 aa3.33□□□□□ -1.88
snR42snR42 SPG3Q04398 127 aaPredicted RBP3.33□□□□□ -1.88
snR42snR42 MFB1Q04922 465 aa3.33□□□□□ -1.88
snR42snR42 YML053CQ04978 212 aa3.33□□□□□ -1.88
snR42snR42 TAF9Q05027 157 aa3.33□□□□□ -1.88
snR42snR42 HRD3Q05787 833 aa3.33□□□□□ -1.88
snR42snR42 YLR287CQ05881 355 aa3.33□□□□□ -1.88
snR42snR42 ECM22Q05958 814 aaPredicted RBP3.33□□□□□ -1.88
snR42snR42 BSP1Q06604 576 aa3.33□□□□□ -1.88
snR42snR42 NOP12Q08208 459 aaKnown RBP3.33□□□□□ -1.88
snR42snR42 APC5Q08683 685 aa3.33□□□□□ -1.88
snR42snR42 TMA16Q08687 178 aa3.33□□□□□ -1.88
snR42snR42 VTS1Q08831 523 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
snR42snR42 HMI1Q12039 706 aa3.33□□□□□ -1.88
snR42snR42 RIB2Q12362 591 aaKnown RBP3.33□□□□□ -1.88
snR42snR42 EMP46Q12396 444 aa3.33□□□□□ -1.88
snR42snR42 ARP7Q12406 477 aa3.33□□□□□ -1.88
snR42snR42 MPD2Q99316 277 aa3.33□□□□□ -1.88
snR42snR42 KAR3P17119 729 aa3.32□□□□□ -1.88
snR42snR42 AEP2P22136 580 aa3.32□□□□□ -1.88
snR42snR42 GPI10P30777 616 aa3.32□□□□□ -1.88
snR42snR42 SGE1P33335 543 aa3.32□□□□□ -1.88
snR42snR42 YMC2P38087 329 aa3.32□□□□□ -1.88
snR42snR42 MOH1P38191 138 aa3.32□□□□□ -1.88
snR42snR42 PSY4P38193 441 aa3.32□□□□□ -1.88
snR42snR42 YBR053CP38235 358 aa3.32□□□□□ -1.88
snR42snR42 SMC2P38989 1170 aaKnown RBP3.32□□□□□ -1.88
snR42snR42 FHL1P39521 936 aa3.32□□□□□ -1.88
snR42snR42 YEL075CP39972 122 aa3.32□□□□□ -1.88
snR42snR42 SNM1P40993 198 aa3.32□□□□□ -1.88
snR42snR42 TFG2P41896 400 aaPredicted RBP3.32□□□□□ -1.88
snR42snR42 STU2P46675 888 aa3.32□□□□□ -1.88
snR42snR42 ASG7P46993 209 aa3.32□□□□□ -1.88
snR42snR42 YJR079WP47126 109 aa3.32□□□□□ -1.88
snR42snR42 YGL140CP53120 1219 aa3.32□□□□□ -1.88
snR42snR42 NMA2P53204 395 aa3.32□□□□□ -1.88
snR42snR42 SIZ1Q04195 904 aa3.32□□□□□ -1.88
snR42snR42 THI20Q08224 551 aa3.32□□□□□ -1.88
snR42snR42 VPS54Q12071 889 aa3.32□□□□□ -1.88
snR42snR42 SVS1Q12254 260 aa3.32□□□□□ -1.88
snR42snR42 YOL098CQ12496 1037 aa3.32□□□□□ -1.88
snR42snR42 FRT1Q99332 602 aa3.32□□□□□ -1.88
snR42snR42 PAB1P04147 577 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
snR42snR42 RAD3P06839 778 aa3.31□□□□□ -1.88
snR42snR42 ATE1P16639 503 aa3.31□□□□□ -1.88
snR42snR42 EMC1P25574 760 aa3.31□□□□□ -1.88
snR42snR42 CAP1P28495 268 aaKnown RBP3.31□□□□□ -1.88
snR42snR42 DSS4P32601 143 aa3.31□□□□□ -1.88
snR42snR42 SWE1P32944 819 aa3.31□□□□□ -1.88
snR42snR42 ALG3P38179 458 aa3.31□□□□□ -1.88
snR42snR42 HSL7P38274 827 aa3.31□□□□□ -1.88
snR42snR42 URA8P38627 578 aaPredicted RBP3.31□□□□□ -1.88
snR42snR42 GDH3P39708 457 aa3.31□□□□□ -1.88
snR42snR42 DOT6P40059 670 aaKnown RBP3.31□□□□□ -1.88
snR42snR42 SDS3P40505 327 aa3.31□□□□□ -1.88
snR42snR42 BST1P43571 1029 aa3.31□□□□□ -1.88
snR42snR42 CNN1P43618 361 aa3.31□□□□□ -1.88
snR42snR42 PRP24P49960 444 aaKnown RBP3.31□□□□□ -1.88
snR42snR42 GTF1P53260 183 aaPredicted RBP3.31□□□□□ -1.88
snR42snR42 ESBP6P53918 673 aa3.31□□□□□ -1.88
snR42snR42 SSL2Q00578 843 aa3.31□□□□□ -1.88
snR42snR42 INA17Q02888 182 aa3.31□□□□□ -1.88
snR42snR42 UME1Q03010 460 aa3.31□□□□□ -1.88
snR42snR42 NUT2Q06213 157 aa3.31□□□□□ -1.88
snR42snR42 SIL1Q08199 421 aa3.31□□□□□ -1.88
snR42snR42 YOR387CQ08910 206 aa3.31□□□□□ -1.88
snR42snR42 RRP6Q12149 733 aaKnown RBP3.31□□□□□ -1.88
snR42snR42 HEM13P11353 328 aaKnown RBP3.3□□□□□ -1.88
snR42snR42 SEC23P15303 768 aaKnown RBP3.3□□□□□ -1.88
snR42snR42 ARF2P19146 181 aaKnown RBP3.3□□□□□ -1.88
snR42snR42 KIN3P22209 435 aa3.3□□□□□ -1.88
snR42snR42 YIH1P25637 258 aa3.3□□□□□ -1.88
snR42snR42 SEC6P32844 805 aa3.3□□□□□ -1.88
snR42snR42 SRB2P34162 210 aa3.3□□□□□ -1.88
snR42snR42 YKL050CP35736 922 aa3.3□□□□□ -1.88
snR42snR42 TRZ1P36159 838 aaPredicted RBP3.3□□□□□ -1.88
snR42snR42 PXL1P36166 706 aa3.3□□□□□ -1.88
snR42snR42 TDA3P38758 523 aa3.3□□□□□ -1.88
snR42snR42 ERG10P41338 398 aaKnown RBP3.3□□□□□ -1.88
snR42snR42 MDJ2P42834 146 aa3.3□□□□□ -1.88
snR42snR42 PHO86P46956 311 aa3.3□□□□□ -1.88
snR42snR42 RSC1P53236 928 aa3.3□□□□□ -1.88
snR42snR42 CWC24P53769 259 aa3.3□□□□□ -1.88
snR42snR42 YNL144CP53907 740 aa3.3□□□□□ -1.88
snR42snR42 SMA1Q02651 245 aa3.3□□□□□ -1.88
snR42snR42 ELP3Q02908 557 aaKnown RBP3.3□□□□□ -1.88
snR42snR42 OPY2Q06810 360 aa3.3□□□□□ -1.88
snR42snR42 AAD4Q07747 329 aa3.3□□□□□ -1.88
snR42snR42 DIS3Q08162 1001 aaKnown RBP3.3□□□□□ -1.88
snR42snR42 AIM39Q08223 395 aa3.3□□□□□ -1.88
snR42snR42 FLC1Q08967 793 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 116.7 ms