RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W SMF1P38925 575 aa5.27□□□□□ -1.57
SSO1YPL232W CEM1P39525 442 aa5.27□□□□□ -1.57
SSO1YPL232W ROM1P53046 1155 aa5.27□□□□□ -1.57
SSO1YPL232W PCL10P53124 433 aa5.27□□□□□ -1.57
SSO1YPL232W RTS3P53289 263 aa5.27□□□□□ -1.57
SSO1YPL232W INA17Q02888 182 aa5.27□□□□□ -1.57
SSO1YPL232W ARG7Q04728 441 aa5.27□□□□□ -1.57
SSO1YPL232W DIC1Q06143 298 aa5.27□□□□□ -1.57
SSO1YPL232W AFT2Q08957 416 aa5.27□□□□□ -1.57
SSO1YPL232W AFI1Q99222 893 aa5.27□□□□□ -1.57
SSO1YPL232W SCH9P11792 824 aaKnown RBP5.26□□□□□ -1.57
SSO1YPL232W YPK1P12688 680 aaKnown RBP5.26□□□□□ -1.57
SSO1YPL232W PDC5P16467 563 aaKnown RBP5.26□□□□□ -1.57
SSO1YPL232W VMA4P22203 233 aaKnown RBP5.26□□□□□ -1.57
SSO1YPL232W SEF1P34228 1148 aa5.26□□□□□ -1.57
SSO1YPL232W RPC25P35718 212 aa5.26□□□□□ -1.57
SSO1YPL232W LRP1P38801 184 aaKnown RBP5.26□□□□□ -1.57
SSO1YPL232W RPL34BP40525 121 aaKnown RBP5.26□□□□□ -1.57
SSO1YPL232W ZIM17P42844 174 aa5.26□□□□□ -1.57
SSO1YPL232W BIR1P47134 954 aa5.26□□□□□ -1.57
SSO1YPL232W YPT11P48559 417 aa5.26□□□□□ -1.57
SSO1YPL232W YGL260WP53056 76 aa5.26□□□□□ -1.57
SSO1YPL232W SWC4P53201 476 aa5.26□□□□□ -1.57
SSO1YPL232W ELP3Q02908 557 aaKnown RBP5.26□□□□□ -1.57
SSO1YPL232W HRQ1Q05549 1077 aa5.26□□□□□ -1.57
SSO1YPL232W SPO75Q07798 868 aa5.26□□□□□ -1.57
SSO1YPL232W CMS1Q07897 291 aaKnown RBP5.26□□□□□ -1.57
SSO1YPL232W PLB3Q08108 686 aa5.26□□□□□ -1.57
SSO1YPL232W YOR059CQ08448 450 aaKnown RBP5.26□□□□□ -1.57
SSO1YPL232W TMS1Q12116 473 aa5.26□□□□□ -1.57
SSO1YPL232W YPR089WO13585 888 aa5.25□□□□□ -1.57
SSO1YPL232W KAR3P17119 729 aa5.25□□□□□ -1.57
SSO1YPL232W PRI2P20457 528 aa5.25□□□□□ -1.57
SSO1YPL232W YCR006CP25350 157 aa5.25□□□□□ -1.57
SSO1YPL232W ARA1P38115 344 aa5.25□□□□□ -1.57
SSO1YPL232W SRP72P38688 640 aaKnown RBP5.25□□□□□ -1.57
SSO1YPL232W RGA1P39083 1007 aa5.25□□□□□ -1.57
SSO1YPL232W TIM17P39515 158 aa5.25□□□□□ -1.57
SSO1YPL232W YEL028WP39989 153 aa5.25□□□□□ -1.57
SSO1YPL232W ALK1P43633 760 aaKnown RBP5.25□□□□□ -1.57
SSO1YPL232W YNL143CP53908 130 aa5.25□□□□□ -1.57
SSO1YPL232W TGL2P54857 326 aa5.25□□□□□ -1.57
SSO1YPL232W BET4Q00618 327 aa5.25□□□□□ -1.57
SSO1YPL232W EBS1Q03466 884 aaKnown RBP5.25□□□□□ -1.57
SSO1YPL232W YMR160WQ03823 816 aa5.25□□□□□ -1.57
SSO1YPL232W RKM2Q03942 479 aa5.25□□□□□ -1.57
SSO1YPL232W HBT1Q07653 1046 aaKnown RBP5.25□□□□□ -1.57
SSO1YPL232W THI21Q08975 551 aa5.25□□□□□ -1.57
SSO1YPL232W GPM3Q12326 303 aa5.25□□□□□ -1.57
SSO1YPL232W HSP42Q12329 375 aa5.25□□□□□ -1.57
SSO1YPL232W DBP2P24783 546 aaKnown RBP5.24□□□□□ -1.57
SSO1YPL232W MRC1P25588 1096 aa5.24□□□□□ -1.57
SSO1YPL232W SCD5P34758 872 aa5.24□□□□□ -1.57
SSO1YPL232W IML3P38265 245 aa5.24□□□□□ -1.57
SSO1YPL232W MSR1P38714 643 aa5.24□□□□□ -1.57
SSO1YPL232W YHL041WP38730 149 aa5.24□□□□□ -1.57
SSO1YPL232W TDA3P38758 523 aa5.24□□□□□ -1.57
SSO1YPL232W YER130CP39959 443 aa5.24□□□□□ -1.57
SSO1YPL232W YIL054WP40524 105 aa5.24□□□□□ -1.57
SSO1YPL232W MKT1P40850 830 aaKnown RBP5.24□□□□□ -1.57
SSO1YPL232W SIP4P46954 829 aa5.24□□□□□ -1.57
SSO1YPL232W YJL132WP47014 750 aa5.24□□□□□ -1.57
SSO1YPL232W YGL108CP53139 140 aa5.24□□□□□ -1.57
SSO1YPL232W SXM1Q04175 944 aaKnown RBP5.24□□□□□ -1.57
SSO1YPL232W UFO1Q04511 668 aa5.24□□□□□ -1.57
SSO1YPL232W TRM8Q12009 286 aa5.24□□□□□ -1.57
SSO1YPL232W YDR262WQ12331 272 aa5.24□□□□□ -1.57
SSO1YPL232W OCA6Q12454 224 aa5.24□□□□□ -1.57
SSO1YPL232W DDP1Q99321 188 aaKnown RBP5.24□□□□□ -1.57
SSO1YPL232W CYR1P08678 2026 aaKnown RBP5.24□□□□□ -1.57
SSO1YPL232W TUB3P09734 445 aaKnown RBP5.23□□□□□ -1.57
SSO1YPL232W UBA1P22515 1024 aaKnown RBP5.23□□□□□ -1.57
SSO1YPL232W RFA2P26754 273 aaKnown RBP5.23□□□□□ -1.57
SSO1YPL232W NTH1P32356 751 aa5.23□□□□□ -1.57
SSO1YPL232W MVD1P32377 396 aaKnown RBP5.23□□□□□ -1.57
SSO1YPL232W SPT16P32558 1035 aaKnown RBP5.23□□□□□ -1.57
SSO1YPL232W CDC13P32797 924 aaKnown RBP5.23□□□□□ -1.57
SSO1YPL232W SMC1P32908 1225 aa5.23□□□□□ -1.57
SSO1YPL232W MRPL37P36532 105 aa5.23□□□□□ -1.57
SSO1YPL232W EXO5P38289 585 aa5.23□□□□□ -1.57
SSO1YPL232W TCB2P48231 1178 aa5.23□□□□□ -1.57
SSO1YPL232W TRF5P48561 642 aaKnown RBP5.23□□□□□ -1.57
SSO1YPL232W NRD1P53617 575 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
SSO1YPL232W HST3P53687 447 aa5.23□□□□□ -1.57
SSO1YPL232W YNL108CP53929 270 aa5.23□□□□□ -1.57
SSO1YPL232W YPR148CQ06523 435 aa5.23□□□□□ -1.57
SSO1YPL232W SWC7Q06707 132 aa5.23□□□□□ -1.57
SSO1YPL232W RRP6Q12149 733 aaKnown RBP5.23□□□□□ -1.57
SSO1YPL232W PRT1P06103 763 aaKnown RBP5.22□□□□□ -1.57
SSO1YPL232W GPA1P08539 472 aa5.22□□□□□ -1.57
SSO1YPL232W MSB1P21339 1137 aaKnown RBP5.22□□□□□ -1.57
SSO1YPL232W SPC110P32380 944 aa5.22□□□□□ -1.57
SSO1YPL232W NRP1P32770 719 aaKnown RBP RIP-Chip data5.22□□□□□ -1.57not detected
SSO1YPL232W SWC5P38326 303 aa5.22□□□□□ -1.57
SSO1YPL232W RPH1P39956 796 aa5.22□□□□□ -1.57
SSO1YPL232W MGS1P40151 587 aa5.22□□□□□ -1.57
SSO1YPL232W IST3P40565 148 aaPredicted RBP5.22□□□□□ -1.57
SSO1YPL232W SSU1P41930 458 aa5.22□□□□□ -1.57
SSO1YPL232W YFR018CP43599 363 aa5.22□□□□□ -1.57
SSO1YPL232W IKS1P47042 667 aa5.22□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms