RNA–Protein interactions for RNA: YPL230W

USV1, Transcript of Putative transcription factor containing a C2H2 zinc finger, yeast

Gene USV1, Length 1,176 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
USV1	YPL230W	NUP1	P20676	1076 aa		4.25	□□□□□ -1.73
USV1	YPL230W	TY2A-C	P25383	438 aa		4.25	□□□□□ -1.73
USV1	YPL230W	GMH1	P36125	273 aa		4.25	□□□□□ -1.73
USV1	YPL230W	YGR151C	P53287	111 aa		4.25	□□□□□ -1.73
USV1	YPL230W	REG1	Q00816	1014 aa		4.25	□□□□□ -1.73
USV1	YPL230W	FMP30	Q02883	468 aa		4.25	□□□□□ -1.73
USV1	YPL230W	TY2A-DR2	Q03483	438 aa		4.25	□□□□□ -1.73
USV1	YPL230W	STP3	Q05937	343 aa		4.25	□□□□□ -1.73
USV1	YPL230W	VAM6	Q07468	1049 aa		4.25	□□□□□ -1.73
USV1	YPL230W	TY2A-B	Q12260	438 aa		4.25	□□□□□ -1.73
USV1	YPL230W	TY2A-OR2	Q12293	438 aa		4.25	□□□□□ -1.73
USV1	YPL230W	TY2A-DR1	Q12392	438 aa		4.25	□□□□□ -1.73
USV1	YPL230W	TY2A-OR1	Q12439	438 aa		4.25	□□□□□ -1.73
USV1	YPL230W	ERP4	Q12450	207 aa		4.25	□□□□□ -1.73
USV1	YPL230W	TY2A-DR3	Q99303	438 aa		4.25	□□□□□ -1.73
USV1	YPL230W	PGK1	P00560	416 aa	Known RBP	4.24	□□□□□ -1.73
USV1	YPL230W	YCR061W	P25639	631 aa		4.24	□□□□□ -1.73
USV1	YPL230W	CAP1	P28495	268 aa	Known RBP	4.24	□□□□□ -1.73
USV1	YPL230W	NFU1	P32860	256 aa		4.24	□□□□□ -1.73
USV1	YPL230W	PSD1	P39006	500 aa		4.24	□□□□□ -1.73
USV1	YPL230W	FMP10	P40098	244 aa		4.24	□□□□□ -1.73
USV1	YPL230W	NMA2	P53204	395 aa		4.24	□□□□□ -1.73
USV1	YPL230W	DIP5	P53388	608 aa		4.24	□□□□□ -1.73
USV1	YPL230W	CSL4	P53859	292 aa	Predicted RBP	4.24	□□□□□ -1.73
USV1	YPL230W	MFM1	Q02783	413 aa		4.24	□□□□□ -1.73
USV1	YPL230W	RKI1	Q12189	258 aa		4.24	□□□□□ -1.73
USV1	YPL230W	PNO1	Q99216	274 aa	Known RBP	4.24	□□□□□ -1.73
USV1	YPL230W	YLR302C	O13544	120 aa		4.23	□□□□□ -1.73
USV1	YPL230W	SEM1	O94742	89 aa		4.23	□□□□□ -1.73
USV1	YPL230W	ATP2	P00830	511 aa	Known RBP	4.23	□□□□□ -1.73
USV1	YPL230W	MET8	P15807	274 aa		4.23	□□□□□ -1.73
USV1	YPL230W	MRP20	P32387	263 aa		4.23	□□□□□ -1.73
USV1	YPL230W	GCD7	P32502	381 aa	Predicted RBP	4.23	□□□□□ -1.73
USV1	YPL230W	KSP1	P38691	1029 aa	Known RBP	4.23	□□□□□ -1.73
USV1	YPL230W	YJR061W	P40355	935 aa		4.23	□□□□□ -1.73
USV1	YPL230W	TIM10	P87108	93 aa		4.23	□□□□□ -1.73
USV1	YPL230W	YKU80	Q04437	629 aa		4.23	□□□□□ -1.73
USV1	YPL230W	FOB1	O13329	566 aa		4.22	□□□□□ -1.73
USV1	YPL230W	ABF1	P14164	731 aa		4.22	□□□□□ -1.73
USV1	YPL230W	SDH8	P38345	138 aa		4.22	□□□□□ -1.73
USV1	YPL230W	ARO9	P38840	513 aa	Predicted RBP	4.22	□□□□□ -1.73
USV1	YPL230W	IST3	P40565	148 aa	Predicted RBP	4.22	□□□□□ -1.73
USV1	YPL230W	STB2	P46679	850 aa		4.22	□□□□□ -1.73
USV1	YPL230W	YIP4	P53093	235 aa		4.22	□□□□□ -1.73
USV1	YPL230W	SPC98	P53540	846 aa		4.22	□□□□□ -1.73
USV1	YPL230W	BSC5	P53755	489 aa		4.22	□□□□□ -1.73
USV1	YPL230W	DAK1	P54838	584 aa	Known RBP	4.22	□□□□□ -1.73
USV1	YPL230W	RPS15	Q01855	142 aa	Known RBP	4.22	□□□□□ -1.73
USV1	YPL230W	UFO1	Q04511	668 aa		4.22	□□□□□ -1.73
USV1	YPL230W	LAM4	P38800	1345 aa		4.21	□□□□□ -1.73
USV1	YPL230W	RPB2	P08518	1224 aa	Known RBP	4.21	□□□□□ -1.74
USV1	YPL230W	STE12	P13574	688 aa		4.21	□□□□□ -1.74
USV1	YPL230W	URK1	P27515	501 aa		4.21	□□□□□ -1.74
USV1	YPL230W	SWC3	P31376	625 aa		4.21	□□□□□ -1.74
USV1	YPL230W	NUP120	P35729	1037 aa		4.21	□□□□□ -1.74
USV1	YPL230W	CCL1	P37366	393 aa		4.21	□□□□□ -1.74
USV1	YPL230W	APL3	P38065	1025 aa		4.21	□□□□□ -1.74
USV1	YPL230W	SKP2	P42843	763 aa		4.21	□□□□□ -1.74
USV1	YPL230W	SIP4	P46954	829 aa		4.21	□□□□□ -1.74
USV1	YPL230W	BUD17	P53727	317 aa		4.21	□□□□□ -1.74
USV1	YPL230W	MTG1	Q03151	367 aa	Predicted RBP	4.21	□□□□□ -1.74
USV1	YPL230W	USA1	Q03714	838 aa		4.21	□□□□□ -1.74
USV1	YPL230W	TRS23	Q03784	219 aa		4.21	□□□□□ -1.74
USV1	YPL230W	VIP1	Q06685	1146 aa	Known RBP	4.21	□□□□□ -1.74
USV1	YPL230W	TMA16	Q08687	178 aa		4.21	□□□□□ -1.74
USV1	YPL230W	RVB2	Q12464	471 aa	Known RBP	4.21	□□□□□ -1.74
USV1	YPL230W	SKM1	Q12469	655 aa		4.21	□□□□□ -1.74
USV1	YPL230W	MRP7	P12687	371 aa		4.2	□□□□□ -1.74
USV1	YPL230W	STE4	P18851	423 aa		4.2	□□□□□ -1.74
USV1	YPL230W	ERG8	P24521	451 aa		4.2	□□□□□ -1.74
USV1	YPL230W	CNE1	P27825	502 aa		4.2	□□□□□ -1.74
USV1	YPL230W	CDC5	P32562	705 aa		4.2	□□□□□ -1.74
USV1	YPL230W	ESL2	P36168	1195 aa		4.2	□□□□□ -1.74
USV1	YPL230W	BPL1	P48445	690 aa	Predicted RBP	4.2	□□□□□ -1.74
USV1	YPL230W	DUO1	P53168	247 aa	Known RBP	4.2	□□□□□ -1.74
USV1	YPL230W	RBG2	P53295	368 aa	Known RBP	4.2	□□□□□ -1.74
USV1	YPL230W	YSA1	Q01976	231 aa		4.2	□□□□□ -1.74
USV1	YPL230W	SPC19	Q03954	165 aa		4.2	□□□□□ -1.74
USV1	YPL230W	RCO1	Q04779	684 aa		4.2	□□□□□ -1.74
USV1	YPL230W	ENT4	Q07872	247 aa		4.2	□□□□□ -1.74
USV1	YPL230W	YPL216W	Q08964	1102 aa		4.2	□□□□□ -1.74
USV1	YPL230W	YER175W-A	Q8TGU4	54 aa		4.2	□□□□□ -1.74
USV1	YPL230W	VCX1	Q99385	411 aa		4.2	□□□□□ -1.74
USV1	YPL230W	ADE5,7	P07244	802 aa	Known RBP	4.19	□□□□□ -1.74
USV1	YPL230W	RPL19A	P0CX82	189 aa	Known RBP	4.19	□□□□□ -1.74
USV1	YPL230W	RPL19B	P0CX83	189 aa	Predicted RBP	4.19	□□□□□ -1.74
USV1	YPL230W	YPK1	P12688	680 aa	Known RBP	4.19	□□□□□ -1.74
USV1	YPL230W	CMK1	P27466	446 aa	Known RBP	4.19	□□□□□ -1.74
USV1	YPL230W	GEX2	P36173	615 aa		4.19	□□□□□ -1.74
USV1	YPL230W	BUD16	P39988	312 aa		4.19	□□□□□ -1.74
USV1	YPL230W	ASE1	P50275	885 aa		4.19	□□□□□ -1.74
USV1	YPL230W	TDA9	Q04545	1251 aa		4.19	□□□□□ -1.74
USV1	YPL230W	NBP2	Q12163	236 aa		4.19	□□□□□ -1.74
USV1	YPL230W	YOR111W	Q99210	232 aa		4.19	□□□□□ -1.74
USV1	YPL230W	CDC24	P11433	854 aa	Predicted RBP	4.18	□□□□□ -1.74
USV1	YPL230W	OLE1	P21147	510 aa	Known RBP	4.18	□□□□□ -1.74
USV1	YPL230W	PDE1	P22434	369 aa		4.18	□□□□□ -1.74
USV1	YPL230W	APN1	P22936	367 aa		4.18	□□□□□ -1.74
USV1	YPL230W	SAT4	P25333	603 aa	Known RBP	4.18	□□□□□ -1.74
USV1	YPL230W	SGF29	P25554	259 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 57 ms