RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W PAN2P53010 1115 aaPredicted RBP6.03□□□□□ -1.44
ATG4YNL223W TAF6P53040 516 aa6.03□□□□□ -1.44
ATG4YNL223W TAN1P53072 289 aaPredicted RBP6.03□□□□□ -1.44
ATG4YNL223W UTP8P53276 713 aaKnown RBP6.03□□□□□ -1.44
ATG4YNL223W TRM112P53738 135 aaPredicted RBP6.03□□□□□ -1.44
ATG4YNL223W SUB1P54000 292 aaKnown RBP6.03□□□□□ -1.44
ATG4YNL223W RLI1Q03195 608 aaKnown RBP6.03□□□□□ -1.44
ATG4YNL223W HEH2Q03281 663 aa6.03□□□□□ -1.44
ATG4YNL223W VPS16Q03308 798 aa6.03□□□□□ -1.44
ATG4YNL223W ECM38Q05902 660 aaPredicted RBP6.03□□□□□ -1.44
ATG4YNL223W BSP1Q06604 576 aa6.03□□□□□ -1.44
ATG4YNL223W CMS1Q07897 291 aaKnown RBP6.03□□□□□ -1.44
ATG4YNL223W YPQ1Q12010 308 aa6.03□□□□□ -1.44
ATG4YNL223W OCA6Q12454 224 aa6.03□□□□□ -1.44
ATG4YNL223W SPE1P08432 466 aa6.02□□□□□ -1.44
ATG4YNL223W BAS1P22035 811 aa6.02□□□□□ -1.44
ATG4YNL223W AAD3P25612 363 aa6.02□□□□□ -1.44
ATG4YNL223W MET22P32179 357 aa6.02□□□□□ -1.44
ATG4YNL223W NDI1P32340 513 aa6.02□□□□□ -1.44
ATG4YNL223W GDA1P32621 518 aa6.02□□□□□ -1.44
ATG4YNL223W BEM3P32873 1128 aa6.02□□□□□ -1.44
ATG4YNL223W CYM1P32898 989 aa6.02□□□□□ -1.44
ATG4YNL223W HEK2P38199 381 aaKnown RBP RIP-Chip data6.02□□□□□ -1.44not detected
ATG4YNL223W HSM3P38348 480 aa6.02□□□□□ -1.44
ATG4YNL223W MSC7P38694 644 aa6.02□□□□□ -1.44
ATG4YNL223W SFB3P38810 929 aa6.02□□□□□ -1.44
ATG4YNL223W PEP8P40335 379 aa6.02□□□□□ -1.44
ATG4YNL223W REF2P42073 533 aaPredicted RBP6.02□□□□□ -1.44
ATG4YNL223W ARH1P48360 493 aa6.02□□□□□ -1.44
ATG4YNL223W TRF5P48561 642 aaKnown RBP6.02□□□□□ -1.44
ATG4YNL223W SIW14P53965 281 aa6.02□□□□□ -1.44
ATG4YNL223W CDC123Q05791 360 aa6.02□□□□□ -1.44
ATG4YNL223W YOR387CQ08910 206 aa6.02□□□□□ -1.44
ATG4YNL223W RIB2Q12362 591 aaKnown RBP6.02□□□□□ -1.44
ATG4YNL223W SPE4Q12455 300 aa6.02□□□□□ -1.44
ATG4YNL223W KCS1Q12494 1050 aa6.02□□□□□ -1.44
ATG4YNL223W MTF1P14908 341 aaKnown RBP6.02□□□□□ -1.45
ATG4YNL223W HSP26P15992 214 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
ATG4YNL223W PEX1P24004 1043 aa6.02□□□□□ -1.45
ATG4YNL223W SEC14P24280 304 aaKnown RBP6.02□□□□□ -1.45
ATG4YNL223W URK1P27515 501 aa6.02□□□□□ -1.45
ATG4YNL223W HRR25P29295 494 aaKnown RBP6.02□□□□□ -1.45
ATG4YNL223W ISF1P32488 338 aa6.02□□□□□ -1.45
ATG4YNL223W COY1P34237 679 aa6.02□□□□□ -1.45
ATG4YNL223W RDH54P38086 958 aa6.02□□□□□ -1.45
ATG4YNL223W SRP68P38687 599 aaKnown RBP6.02□□□□□ -1.45
ATG4YNL223W YJL206CP39529 758 aa6.02□□□□□ -1.45
ATG4YNL223W VAC8P39968 578 aa6.02□□□□□ -1.45
ATG4YNL223W RRN7P40992 514 aa6.02□□□□□ -1.45
ATG4YNL223W UFE1P41834 346 aa6.02□□□□□ -1.45
ATG4YNL223W ASN2P49090 572 aaKnown RBP6.02□□□□□ -1.45
ATG4YNL223W PRP24P49960 444 aaKnown RBP6.02□□□□□ -1.45
ATG4YNL223W MCM6P53091 1017 aaKnown RBP6.02□□□□□ -1.45
ATG4YNL223W TIM13P53299 105 aa6.02□□□□□ -1.45
ATG4YNL223W COQ6P53318 479 aa6.02□□□□□ -1.45
ATG4YNL223W BUD32P53323 261 aa6.02□□□□□ -1.45
ATG4YNL223W RNY1Q02933 434 aaKnown RBP6.02□□□□□ -1.45
ATG4YNL223W RPN4Q03465 531 aa6.02□□□□□ -1.45
ATG4YNL223W YMR209CQ03648 457 aa6.02□□□□□ -1.45
ATG4YNL223W SPO71Q03868 1245 aa6.02□□□□□ -1.45
ATG4YNL223W NHX1Q04121 633 aa6.02□□□□□ -1.45
ATG4YNL223W YLR257WQ06146 321 aaKnown RBP6.02□□□□□ -1.45
ATG4YNL223W YSH1Q06224 779 aaPredicted RBP6.02□□□□□ -1.45
ATG4YNL223W RSC2Q06488 889 aa6.02□□□□□ -1.45
ATG4YNL223W YLR012CQ07927 99 aa6.02□□□□□ -1.45
ATG4YNL223W BUD20Q08004 166 aaPredicted RBP6.02□□□□□ -1.45
ATG4YNL223W PGC1Q08959 321 aa6.02□□□□□ -1.45
ATG4YNL223W YPL225WQ08971 146 aaKnown RBP6.02□□□□□ -1.45
ATG4YNL223W IDI1P15496 288 aa6.01□□□□□ -1.45
ATG4YNL223W ACO1P19414 778 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
ATG4YNL223W ATP12P22135 325 aa6.01□□□□□ -1.45
ATG4YNL223W ARG1P22768 420 aa6.01□□□□□ -1.45
ATG4YNL223W AAT2P23542 418 aaKnown RBP6.01□□□□□ -1.45
ATG4YNL223W RIM1P32445 135 aaKnown RBP6.01□□□□□ -1.45
ATG4YNL223W KAR9P32526 644 aa6.01□□□□□ -1.45
ATG4YNL223W YSC84P32793 468 aa6.01□□□□□ -1.45
ATG4YNL223W RRP14P36080 434 aaKnown RBP6.01□□□□□ -1.45
ATG4YNL223W YHI9P38765 294 aa6.01□□□□□ -1.45
ATG4YNL223W CRP1P38845 465 aaKnown RBP6.01□□□□□ -1.45
ATG4YNL223W SEO1P39709 593 aa6.01□□□□□ -1.45
ATG4YNL223W BST1P43571 1029 aa6.01□□□□□ -1.45
ATG4YNL223W PSP1P50896 841 aaKnown RBP6.01□□□□□ -1.45
ATG4YNL223W STR3P53101 465 aaKnown RBP6.01□□□□□ -1.45
ATG4YNL223W RCF2P53721 224 aa6.01□□□□□ -1.45
ATG4YNL223W ADE12P80210 433 aaKnown RBP6.01□□□□□ -1.45
ATG4YNL223W CDC14Q00684 551 aa6.01□□□□□ -1.45
ATG4YNL223W ELP4Q02884 456 aaKnown RBP6.01□□□□□ -1.45
ATG4YNL223W YDR338CQ05497 695 aa6.01□□□□□ -1.45
ATG4YNL223W RGS2Q99188 309 aa6.01□□□□□ -1.45
ATG4YNL223W YPT6Q99260 215 aa6.01□□□□□ -1.45
ATG4YNL223W ERG20P08524 352 aaKnown RBP6□□□□□ -1.45
ATG4YNL223W HSF1P10961 833 aa6□□□□□ -1.45
ATG4YNL223W PMR1P13586 950 aa6□□□□□ -1.45
ATG4YNL223W GCY1P14065 312 aaKnown RBP RIP-Chip data6□□□□□ -1.45not detected
ATG4YNL223W PRP4P20053 465 aaKnown RBP6□□□□□ -1.45
ATG4YNL223W AMD2P22580 549 aa6□□□□□ -1.45
ATG4YNL223W MSH2P25847 964 aa6□□□□□ -1.45
ATG4YNL223W MRE11P32829 692 aa6□□□□□ -1.45
ATG4YNL223W ADD66P36040 267 aa6□□□□□ -1.45
ATG4YNL223W RIM2P38127 377 aa6□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 51 ms