RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C IRC6P43615 237 aa2.49□□□□□ -2.01
UBP11YKR098C YRB30P53107 440 aaPredicted RBP2.49□□□□□ -2.01
UBP11YKR098C SPC98P53540 846 aa2.49□□□□□ -2.01
UBP11YKR098C YNR061CP53747 219 aa2.49□□□□□ -2.01
UBP11YKR098C YNL092WP53934 400 aa2.49□□□□□ -2.01
UBP11YKR098C TRS23Q03784 219 aa2.49□□□□□ -2.01
UBP11YKR098C GTB1Q04924 702 aa2.49□□□□□ -2.01
UBP11YKR098C ENT4Q07872 247 aa2.49□□□□□ -2.01
UBP11YKR098C PSK2Q08217 1101 aa2.49□□□□□ -2.01
UBP11YKR098C SWT1Q12104 458 aa2.49□□□□□ -2.01
UBP11YKR098C ERP4Q12450 207 aa2.49□□□□□ -2.01
UBP11YKR098C YER175W-AQ8TGU4 54 aa2.49□□□□□ -2.01
UBP11YKR098C AAC1P04710 309 aa2.49□□□□□ -2.01
UBP11YKR098C YML003WP0CF16 290 aa2.49□□□□□ -2.01
UBP11YKR098C YPK1P12688 680 aaKnown RBP2.49□□□□□ -2.01
UBP11YKR098C PDE1P22434 369 aa2.49□□□□□ -2.01
UBP11YKR098C AMD2P22580 549 aa2.49□□□□□ -2.01
UBP11YKR098C GMH1P36125 273 aa2.49□□□□□ -2.01
UBP11YKR098C CBR1P38626 284 aaKnown RBP2.49□□□□□ -2.01
UBP11YKR098C NPR2P39923 615 aa2.49□□□□□ -2.01
UBP11YKR098C UBP5P39944 805 aa2.49□□□□□ -2.01
UBP11YKR098C PFK26P40433 827 aaKnown RBP2.49□□□□□ -2.01
UBP11YKR098C YIL161WP40449 235 aaKnown RBP2.49□□□□□ -2.01
UBP11YKR098C SGM1P47166 707 aa2.49□□□□□ -2.01
UBP11YKR098C CTR1P49573 406 aa2.49□□□□□ -2.01
UBP11YKR098C DUO1P53168 247 aaKnown RBP2.49□□□□□ -2.01
UBP11YKR098C YMR206WQ03695 313 aa2.49□□□□□ -2.01
UBP11YKR098C YDR179W-AQ03983 463 aa2.49□□□□□ -2.01
UBP11YKR098C TAF11Q04226 346 aa2.49□□□□□ -2.01
UBP11YKR098C ATG23Q06671 453 aa2.49□□□□□ -2.01
UBP11YKR098C TGS1Q12052 315 aa2.49□□□□□ -2.01
UBP11YKR098C TAH18Q12181 623 aa2.49□□□□□ -2.01
UBP11YKR098C ERG27Q12452 347 aaKnown RBP2.49□□□□□ -2.01
UBP11YKR098C YOR111WQ99210 232 aa2.49□□□□□ -2.01
UBP11YKR098C TRM2P33753 639 aa2.48□□□□□ -2.01
UBP11YKR098C ALY1P36117 915 aa2.48□□□□□ -2.01
UBP11YKR098C GLG1P36143 616 aa2.48□□□□□ -2.01
UBP11YKR098C LNP1P38878 278 aa2.48□□□□□ -2.01
UBP11YKR098C UBP7P40453 1071 aa2.48□□□□□ -2.01
UBP11YKR098C RMD8P43620 662 aa2.48□□□□□ -2.01
UBP11YKR098C AAD10P47182 288 aa2.48□□□□□ -2.01
UBP11YKR098C YGR079WP53249 370 aa2.48□□□□□ -2.01
UBP11YKR098C PIL1P53252 339 aaKnown RBP2.48□□□□□ -2.01
UBP11YKR098C MRPL19P53875 158 aa2.48□□□□□ -2.01
UBP11YKR098C MUK1Q02866 612 aa2.48□□□□□ -2.01
UBP11YKR098C MUB1Q03162 620 aa2.48□□□□□ -2.01
UBP11YKR098C YML119WQ03208 357 aa2.48□□□□□ -2.01
UBP11YKR098C NGL2Q03264 515 aaKnown RBP2.48□□□□□ -2.01
UBP11YKR098C RAD30Q04049 632 aa2.48□□□□□ -2.01
UBP11YKR098C MRI1Q06489 411 aaKnown RBP2.48□□□□□ -2.01
UBP11YKR098C YDL242WQ07746 117 aa2.48□□□□□ -2.01
UBP11YKR098C YCK1P23291 538 aa2.47□□□□□ -2.01
UBP11YKR098C SLZ1P40167 298 aa2.47□□□□□ -2.01
UBP11YKR098C CCT7P42943 550 aaKnown RBP2.47□□□□□ -2.01
UBP11YKR098C VTC2P43585 828 aa2.47□□□□□ -2.01
UBP11YKR098C SUN4P53616 420 aa2.47□□□□□ -2.01
UBP11YKR098C INN1P53901 409 aa2.47□□□□□ -2.01
UBP11YKR098C UBP16Q02863 499 aa2.47□□□□□ -2.01
UBP11YKR098C MFB1Q04922 465 aa2.47□□□□□ -2.01
UBP11YKR098C YDL073WQ07454 984 aa2.47□□□□□ -2.01
UBP11YKR098C CIR2Q08822 631 aa2.47□□□□□ -2.01
UBP11YKR098C NUS1Q12063 375 aa2.47□□□□□ -2.01
UBP11YKR098C NMD4Q12129 218 aa2.47□□□□□ -2.01
UBP11YKR098C HUA2Q12134 243 aa2.47□□□□□ -2.01
UBP11YKR098C SCM3Q12334 223 aa2.47□□□□□ -2.01
UBP11YKR098C Q0010Q9ZZX9 128 aa2.47□□□□□ -2.01
UBP11YKR098C CET1O13297 549 aaPredicted RBP2.47□□□□□ -2.01
UBP11YKR098C CHO2P05374 869 aaKnown RBP2.47□□□□□ -2.01
UBP11YKR098C RFA2P26754 273 aaKnown RBP2.47□□□□□ -2.01
UBP11YKR098C RKM3P38222 552 aa2.47□□□□□ -2.01
UBP11YKR098C PIH1P38768 344 aa2.47□□□□□ -2.01
UBP11YKR098C BDH2P39713 417 aa2.47□□□□□ -2.01
UBP11YKR098C MIT1P40002 666 aa2.47□□□□□ -2.01
UBP11YKR098C TPA1P40032 644 aaKnown RBP2.47□□□□□ -2.01
UBP11YKR098C MAM1P40065 302 aa2.47□□□□□ -2.01
UBP11YKR098C SPC19Q03954 165 aa2.47□□□□□ -2.01
UBP11YKR098C URN1Q06525 465 aaKnown RBP2.47□□□□□ -2.01
UBP11YKR098C ESC8Q08119 714 aa2.47□□□□□ -2.01
UBP11YKR098C YBR126W-AQ8TGU7 68 aa2.47□□□□□ -2.01
UBP11YKR098C YOR019WQ99248 730 aa2.47□□□□□ -2.01
UBP11YKR098C SEC53P07283 254 aaKnown RBP2.46□□□□□ -2.02
UBP11YKR098C WHI2P12611 486 aa2.46□□□□□ -2.02
UBP11YKR098C KAR3P17119 729 aa2.46□□□□□ -2.02
UBP11YKR098C RNR3P21672 869 aaKnown RBP2.46□□□□□ -2.02
UBP11YKR098C YSP3P25036 478 aa2.46□□□□□ -2.02
UBP11YKR098C PGS1P25578 521 aa2.46□□□□□ -2.02
UBP11YKR098C SRB5P32585 307 aa2.46□□□□□ -2.02
UBP11YKR098C HES1P35843 434 aa2.46□□□□□ -2.02
UBP11YKR098C YMC2P38087 329 aa2.46□□□□□ -2.02
UBP11YKR098C YBL029WP38201 376 aa2.46□□□□□ -2.02
UBP11YKR098C ERC1P38767 581 aa2.46□□□□□ -2.02
UBP11YKR098C NPA3P47122 385 aa2.46□□□□□ -2.02
UBP11YKR098C MRX6P48564 524 aa2.46□□□□□ -2.02
UBP11YKR098C VPS75P53853 264 aa2.46□□□□□ -2.02
UBP11YKR098C NGL3Q03210 505 aa2.46□□□□□ -2.02
UBP11YKR098C YLR287CQ05881 355 aa2.46□□□□□ -2.02
UBP11YKR098C UTP21Q06078 939 aaPredicted RBP2.46□□□□□ -2.02
UBP11YKR098C RIX7Q07844 837 aaKnown RBP2.46□□□□□ -2.02
UBP11YKR098C CRT10Q08226 957 aa2.46□□□□□ -2.02
UBP11YKR098C CTI6Q08923 506 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 54.6 ms