RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD2YKL027W RPL34AP87262 121 aaPredicted RBP11.86□□□□□ -0.51
TCD2YKL027W RSC4Q02206 625 aa11.86□□□□□ -0.51
TCD2YKL027W CMS1Q07897 291 aaKnown RBP11.86□□□□□ -0.51
TCD2YKL027W CUE5Q08412 411 aaKnown RBP11.86□□□□□ -0.51
TCD2YKL027W HSP60P19882 572 aaKnown RBP11.85□□□□□ -0.51
TCD2YKL027W FPR1P20081 114 aaKnown RBP11.85□□□□□ -0.51
TCD2YKL027W MRPL25P23369 157 aa11.85□□□□□ -0.51
TCD2YKL027W MRM1P25270 412 aa11.85□□□□□ -0.51
TCD2YKL027W GID7P25569 745 aa11.85□□□□□ -0.51
TCD2YKL027W GEX1P25596 615 aa11.85□□□□□ -0.51
TCD2YKL027W CDC20P26309 610 aa11.85□□□□□ -0.51
TCD2YKL027W SRP101P32916 621 aa11.85□□□□□ -0.51
TCD2YKL027W GEX2P36173 615 aa11.85□□□□□ -0.51
TCD2YKL027W RMD8P43620 662 aa11.85□□□□□ -0.51
TCD2YKL027W TEP1P53916 434 aa11.85□□□□□ -0.51
TCD2YKL027W STE23Q06010 1027 aa11.85□□□□□ -0.51
TCD2YKL027W LDB17Q12342 491 aa11.85□□□□□ -0.51
TCD2YKL027W ILS1P09436 1072 aaKnown RBP11.84□□□□□ -0.51
TCD2YKL027W URA10P30402 227 aa11.84□□□□□ -0.51
TCD2YKL027W SMI1P32566 505 aa11.84□□□□□ -0.51
TCD2YKL027W LTV1P34078 463 aa11.84□□□□□ -0.51
TCD2YKL027W SMX2P40204 77 aaKnown RBP11.84□□□□□ -0.51
TCD2YKL027W OSW5P40219 148 aa11.84□□□□□ -0.51
TCD2YKL027W ALA1P40825 983 aaKnown RBP11.84□□□□□ -0.51
TCD2YKL027W BUD13P46947 266 aaPredicted RBP11.84□□□□□ -0.51
TCD2YKL027W VEL1P53058 206 aa11.84□□□□□ -0.51
TCD2YKL027W AIM14P53109 570 aa11.84□□□□□ -0.51
TCD2YKL027W TIM13P53299 105 aa11.84□□□□□ -0.51
TCD2YKL027W IPI3P53877 555 aa11.84□□□□□ -0.51
TCD2YKL027W ORC3P54790 616 aa11.84□□□□□ -0.51
TCD2YKL027W TRE2Q08693 809 aa11.84□□□□□ -0.51
TCD2YKL027W RAD1P06777 1100 aa11.83□□□□□ -0.52
TCD2YKL027W ACO1P19414 778 aaKnown RBP RIP-Chip data11.83□□□□□ -0.52not detected
TCD2YKL027W LIP5P32875 414 aa11.83□□□□□ -0.52
TCD2YKL027W STE5P32917 917 aa11.83□□□□□ -0.52
TCD2YKL027W PIR1Q03178 341 aa11.83□□□□□ -0.52
TCD2YKL027W ADE13Q05911 482 aaKnown RBP11.83□□□□□ -0.52
TCD2YKL027W LCB5Q06147 687 aaKnown RBP11.83□□□□□ -0.52
TCD2YKL027W CET1O13297 549 aaPredicted RBP11.82□□□□□ -0.52
TCD2YKL027W SCH9P11792 824 aaKnown RBP11.82□□□□□ -0.52
TCD2YKL027W YCL068CP25593 260 aa11.82□□□□□ -0.52
TCD2YKL027W STE13P33894 931 aa11.82□□□□□ -0.52
TCD2YKL027W CCT2P39076 527 aaKnown RBP11.82□□□□□ -0.52
TCD2YKL027W RAD26P40352 1085 aa11.82□□□□□ -0.52
TCD2YKL027W BIO5P53744 561 aaKnown RBP11.82□□□□□ -0.52
TCD2YKL027W PRM1P53835 661 aa11.82□□□□□ -0.52
TCD2YKL027W KTR5P53966 522 aaPredicted RBP11.82□□□□□ -0.52
TCD2YKL027W RPB2P08518 1224 aaKnown RBP11.81□□□□□ -0.52
TCD2YKL027W GPA2P10823 449 aa11.81□□□□□ -0.52
TCD2YKL027W ILV6P25605 309 aaKnown RBP11.81□□□□□ -0.52
TCD2YKL027W PXA2P34230 853 aa11.81□□□□□ -0.52
TCD2YKL027W SIP4P46954 829 aa11.81□□□□□ -0.52
TCD2YKL027W URB2P47108 1174 aa11.81□□□□□ -0.52
TCD2YKL027W ZIP2P53061 704 aa11.81□□□□□ -0.52
TCD2YKL027W RNT1Q02555 471 aa11.81□□□□□ -0.52
TCD2YKL027W YPR084WQ06821 456 aa11.81□□□□□ -0.52
TCD2YKL027W PER33Q12144 273 aa11.81□□□□□ -0.52
TCD2YKL027W FAB1P34756 2278 aa11.8□□□□□ -0.52
TCD2YKL027W TEF1P02994 458 aaKnown RBP11.8□□□□□ -0.52
TCD2YKL027W CLN1P20437 546 aa11.8□□□□□ -0.52
TCD2YKL027W TFA2P36145 328 aa11.8□□□□□ -0.52
TCD2YKL027W RSM7P47150 247 aa11.8□□□□□ -0.52
TCD2YKL027W YNR061CP53747 219 aa11.8□□□□□ -0.52
TCD2YKL027W NOP15P53927 220 aaPredicted RBP11.8□□□□□ -0.52
TCD2YKL027W EFM6P53970 246 aa11.8□□□□□ -0.52
TCD2YKL027W SLT2Q00772 484 aa11.8□□□□□ -0.52
TCD2YKL027W REG1Q00816 1014 aa11.8□□□□□ -0.52
TCD2YKL027W YPR114WQ06107 315 aa11.8□□□□□ -0.52
TCD2YKL027W RSB1Q08417 382 aa11.8□□□□□ -0.52
TCD2YKL027W YKL068W-AQ3E826 78 aa11.8□□□□□ -0.52
TCD2YKL027W ARG4P04076 463 aaPredicted RBP11.79□□□□□ -0.52
TCD2YKL027W MNE1P24720 663 aa11.79□□□□□ -0.52
TCD2YKL027W YSP3P25036 478 aa11.79□□□□□ -0.52
TCD2YKL027W YJU3P28321 313 aa11.79□□□□□ -0.52
TCD2YKL027W ECM32P32644 1121 aaKnown RBP11.79□□□□□ -0.52
TCD2YKL027W ARP1P38696 384 aa11.79□□□□□ -0.52
TCD2YKL027W YIR007WP40566 764 aa11.79□□□□□ -0.52
TCD2YKL027W LSB3P43603 459 aaKnown RBP11.79□□□□□ -0.52
TCD2YKL027W NUP100Q02629 959 aa11.79□□□□□ -0.52
TCD2YKL027W MSF1P08425 469 aa11.78□□□□□ -0.52
TCD2YKL027W INO1P11986 533 aa11.78□□□□□ -0.52
TCD2YKL027W DCC1P25559 380 aa11.78□□□□□ -0.52
TCD2YKL027W AEP1P32493 518 aa11.78□□□□□ -0.52
TCD2YKL027W PXA1P41909 870 aa11.78□□□□□ -0.52
TCD2YKL027W YFL012WP43580 148 aa11.78□□□□□ -0.52
TCD2YKL027W ART5P53244 586 aaKnown RBP11.78□□□□□ -0.52
TCD2YKL027W GSF2Q04697 403 aaKnown RBP11.78□□□□□ -0.52
TCD2YKL027W ADY3Q07732 790 aa11.78□□□□□ -0.52
TCD2YKL027W RUD3Q12234 484 aaKnown RBP11.78□□□□□ -0.52
TCD2YKL027W ILV2P07342 687 aaKnown RBP11.77□□□□□ -0.53
TCD2YKL027W PMA2P19657 947 aa11.77□□□□□ -0.53
TCD2YKL027W AMS1P22855 1083 aa11.77□□□□□ -0.53
TCD2YKL027W RBK1P25332 333 aa11.77□□□□□ -0.53
TCD2YKL027W EMC1P25574 760 aa11.77□□□□□ -0.53
TCD2YKL027W PYC2P32327 1180 aaKnown RBP11.77□□□□□ -0.53
TCD2YKL027W CSE1P33307 960 aa11.77□□□□□ -0.53
TCD2YKL027W CTF13P35203 478 aa11.77□□□□□ -0.53
TCD2YKL027W ALY1P36117 915 aa11.77□□□□□ -0.53
TCD2YKL027W REV7P38927 245 aa11.77□□□□□ -0.53
TCD2YKL027W RGI2P40188 164 aa11.77□□□□□ -0.53
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms