RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W EST1P17214 699 aaPredicted RBP2.2□□□□□ -2.06
RTT107YHR154W SRP101P32916 621 aa2.2□□□□□ -2.06
RTT107YHR154W ALG14P38242 237 aa2.2□□□□□ -2.06
RTT107YHR154W RTS1P38903 757 aa2.2□□□□□ -2.06
RTT107YHR154W SSY5P47002 699 aa2.2□□□□□ -2.06
RTT107YHR154W CTF18P49956 741 aa2.2□□□□□ -2.06
RTT107YHR154W MNT2P53059 558 aa2.2□□□□□ -2.06
RTT107YHR154W COG1P53079 417 aa2.2□□□□□ -2.06
RTT107YHR154W ACS1Q01574 713 aa2.2□□□□□ -2.06
RTT107YHR154W YKR011CQ02209 353 aa2.2□□□□□ -2.06
RTT107YHR154W OAZ1Q02803 292 aa2.2□□□□□ -2.06
RTT107YHR154W RAD30Q04049 632 aa2.2□□□□□ -2.06
RTT107YHR154W GAD1Q04792 585 aa2.2□□□□□ -2.06
RTT107YHR154W RIM20Q12033 661 aa2.2□□□□□ -2.06
RTT107YHR154W GET3Q12154 354 aaKnown RBP2.2□□□□□ -2.06
RTT107YHR154W STE12P13574 688 aa2.2□□□□□ -2.06
RTT107YHR154W THR1P17423 357 aaKnown RBP2.2□□□□□ -2.06
RTT107YHR154W APL1P27351 700 aa2.2□□□□□ -2.06
RTT107YHR154W LOT5P34234 306 aa2.2□□□□□ -2.06
RTT107YHR154W YKR018CP36114 725 aa2.2□□□□□ -2.06
RTT107YHR154W LAS1P36146 502 aaPredicted RBP2.2□□□□□ -2.06
RTT107YHR154W YKR078WP36158 585 aaKnown RBP2.2□□□□□ -2.06
RTT107YHR154W AKL1P38080 1108 aaKnown RBP2.2□□□□□ -2.06
RTT107YHR154W SRO77P38163 1010 aa2.2□□□□□ -2.06
RTT107YHR154W PCL7P40186 285 aa2.2□□□□□ -2.06
RTT107YHR154W LEM3P42838 414 aa2.2□□□□□ -2.06
RTT107YHR154W CIT3P43635 486 aa2.2□□□□□ -2.06
RTT107YHR154W MDE1P47095 244 aa2.2□□□□□ -2.06
RTT107YHR154W ENP2P48234 707 aaKnown RBP2.2□□□□□ -2.06
RTT107YHR154W LCL3P53153 274 aa2.2□□□□□ -2.06
RTT107YHR154W CUL3P53202 744 aa2.2□□□□□ -2.06
RTT107YHR154W HST1P53685 503 aa2.2□□□□□ -2.06
RTT107YHR154W SDH1Q00711 640 aa2.2□□□□□ -2.06
RTT107YHR154W REG1Q00816 1014 aa2.2□□□□□ -2.06
RTT107YHR154W SPH1Q06160 661 aa2.2□□□□□ -2.06
RTT107YHR154W RLP24Q07915 199 aaKnown RBP2.2□□□□□ -2.06
RTT107YHR154W RCN2Q12044 265 aa2.2□□□□□ -2.06
RTT107YHR154W SVS1Q12254 260 aa2.2□□□□□ -2.06
RTT107YHR154W PRP22P24384 1145 aaKnown RBP2.19□□□□□ -2.06
RTT107YHR154W POL4P25615 582 aa2.19□□□□□ -2.06
RTT107YHR154W RSC6P25632 483 aa2.19□□□□□ -2.06
RTT107YHR154W SWC3P31376 625 aa2.19□□□□□ -2.06
RTT107YHR154W ARP2P32381 391 aaKnown RBP2.19□□□□□ -2.06
RTT107YHR154W GCS1P35197 352 aa2.19□□□□□ -2.06
RTT107YHR154W RTT105P40063 208 aa2.19□□□□□ -2.06
RTT107YHR154W ATF1P40353 525 aa2.19□□□□□ -2.06
RTT107YHR154W BUD8P41698 603 aa2.19□□□□□ -2.06
RTT107YHR154W OYE3P41816 400 aaPredicted RBP2.19□□□□□ -2.06
RTT107YHR154W SKP2P42843 763 aa2.19□□□□□ -2.06
RTT107YHR154W RAI1P53063 387 aaKnown RBP2.19□□□□□ -2.06
RTT107YHR154W VID30P53076 958 aa2.19□□□□□ -2.06
RTT107YHR154W BUD9P53226 547 aa2.19□□□□□ -2.06
RTT107YHR154W ERB1Q04660 807 aaKnown RBP2.19□□□□□ -2.06
RTT107YHR154W SWA2Q06677 668 aa2.19□□□□□ -2.06
RTT107YHR154W MED7Q08278 222 aa2.19□□□□□ -2.06
RTT107YHR154W FAB1P34756 2278 aa2.19□□□□□ -2.06
RTT107YHR154W PET111P08468 800 aa2.19□□□□□ -2.06
RTT107YHR154W CBS1P14066 229 aa2.19□□□□□ -2.06
RTT107YHR154W TPM1P17536 199 aaKnown RBP2.19□□□□□ -2.06
RTT107YHR154W CLB3P24870 427 aa2.19□□□□□ -2.06
RTT107YHR154W STE50P25344 346 aa2.19□□□□□ -2.06
RTT107YHR154W MGM1P32266 881 aa2.19□□□□□ -2.06
RTT107YHR154W YSC84P32793 468 aa2.19□□□□□ -2.06
RTT107YHR154W NNK1P36003 928 aa2.19□□□□□ -2.06
RTT107YHR154W GPT2P36148 743 aa2.19□□□□□ -2.06
RTT107YHR154W KSP1P38691 1029 aaKnown RBP2.19□□□□□ -2.06
RTT107YHR154W SAK1P38990 1142 aa2.19□□□□□ -2.06
RTT107YHR154W PZF1P39933 429 aa2.19□□□□□ -2.06
RTT107YHR154W SPO22P40511 975 aa2.19□□□□□ -2.06
RTT107YHR154W MAF1P41910 395 aa2.19□□□□□ -2.06
RTT107YHR154W HDA1P53973 706 aa2.19□□□□□ -2.06
RTT107YHR154W APL4Q12028 832 aa2.19□□□□□ -2.06
RTT107YHR154W REX3Q12090 404 aa2.19□□□□□ -2.06
RTT107YHR154W RTK1Q12100 620 aaPredicted RBP2.19□□□□□ -2.06
RTT107YHR154W SAC3P46674 1301 aa2.19□□□□□ -2.06
RTT107YHR154W SRV2P17555 526 aaKnown RBP2.19□□□□□ -2.06
RTT107YHR154W PRE10P21242 288 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
RTT107YHR154W SIR1P21691 654 aa2.19□□□□□ -2.06
RTT107YHR154W PAP1P29468 568 aaKnown RBP2.19□□□□□ -2.06
RTT107YHR154W SEC21P32074 935 aaKnown RBP2.19□□□□□ -2.06
RTT107YHR154W EBP2P36049 427 aaKnown RBP2.19□□□□□ -2.06
RTT107YHR154W MAL33P38157 468 aa2.19□□□□□ -2.06
RTT107YHR154W RKM3P38222 552 aa2.19□□□□□ -2.06
RTT107YHR154W YLF2P38746 405 aa2.19□□□□□ -2.06
RTT107YHR154W ARB1P40024 610 aaKnown RBP2.19□□□□□ -2.06
RTT107YHR154W RTR1P40084 226 aaPredicted RBP2.19□□□□□ -2.06
RTT107YHR154W EFM4P40516 257 aa2.19□□□□□ -2.06
RTT107YHR154W IST3P40565 148 aaPredicted RBP2.19□□□□□ -2.06
RTT107YHR154W IRC5P43610 853 aa2.19□□□□□ -2.06
RTT107YHR154W OCA1P50946 238 aaPredicted RBP2.19□□□□□ -2.06
RTT107YHR154W RPT4P53549 437 aaKnown RBP2.19□□□□□ -2.06
RTT107YHR154W BRE5P53741 515 aaKnown RBP2.19□□□□□ -2.06
RTT107YHR154W EOS1P53938 366 aa2.19□□□□□ -2.06
RTT107YHR154W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
RTT107YHR154W YSA1Q01976 231 aa2.19□□□□□ -2.06
RTT107YHR154W SSL1Q04673 461 aaPredicted RBP2.19□□□□□ -2.06
RTT107YHR154W RSF1Q05043 376 aa2.19□□□□□ -2.06
RTT107YHR154W MDY2Q12285 212 aa2.19□□□□□ -2.06
RTT107YHR154W ERG27Q12452 347 aaKnown RBP2.19□□□□□ -2.06
RTT107YHR154W CEX1Q12453 761 aa2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 60.1 ms