RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C MET12P46151 657 aa3.36□□□□□ -1.87
XRN1YGL173C POL31P46957 487 aa3.36□□□□□ -1.87
XRN1YGL173C BIT61P47041 543 aa3.36□□□□□ -1.87
XRN1YGL173C HFM1P51979 1187 aa3.36□□□□□ -1.87
XRN1YGL173C DON1Q05610 365 aa3.36□□□□□ -1.87
XRN1YGL173C ADE13Q05911 482 aaKnown RBP3.36□□□□□ -1.87
XRN1YGL173C CLB3P24870 427 aa3.35□□□□□ -1.87
XRN1YGL173C SSE2P32590 693 aaKnown RBP3.35□□□□□ -1.87
XRN1YGL173C BYE1P36106 594 aa3.35□□□□□ -1.87
XRN1YGL173C AAP1P37898 856 aaKnown RBP3.35□□□□□ -1.87
XRN1YGL173C VID28P40547 921 aa3.35□□□□□ -1.87
XRN1YGL173C ERR3P42222 437 aa3.35□□□□□ -1.87
XRN1YGL173C ALY2P47029 1046 aa3.35□□□□□ -1.87
XRN1YGL173C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
XRN1YGL173C SRL4Q03085 281 aa3.35□□□□□ -1.87
XRN1YGL173C DPB4Q04603 196 aaKnown RBP3.35□□□□□ -1.87
XRN1YGL173C YLR455WQ06188 304 aa3.35□□□□□ -1.87
XRN1YGL173C ENB1Q08299 606 aa3.35□□□□□ -1.87
XRN1YGL173C LDB17Q12342 491 aa3.35□□□□□ -1.87
XRN1YGL173C PDH1Q12428 516 aaKnown RBP3.35□□□□□ -1.87
XRN1YGL173C ISN1Q99312 450 aa3.35□□□□□ -1.87
XRN1YGL173C YEL076C-AP0CX16 216 aa3.35□□□□□ -1.87
XRN1YGL173C YLR464WP0CX17 216 aa3.35□□□□□ -1.87
XRN1YGL173C KAR3P17119 729 aa3.35□□□□□ -1.87
XRN1YGL173C CAP1P28495 268 aaKnown RBP3.35□□□□□ -1.87
XRN1YGL173C SRB5P32585 307 aa3.35□□□□□ -1.87
XRN1YGL173C MUD2P36084 527 aaKnown RBP3.35□□□□□ -1.87
XRN1YGL173C YKR051WP36142 418 aa3.35□□□□□ -1.87
XRN1YGL173C YEL076CP39971 216 aa3.35□□□□□ -1.87
XRN1YGL173C PCL7P40186 285 aa3.35□□□□□ -1.87
XRN1YGL173C EXG2P52911 562 aa3.35□□□□□ -1.87
XRN1YGL173C RRT6P53117 311 aaPredicted RBP3.35□□□□□ -1.87
XRN1YGL173C TWF1P53250 332 aa3.35□□□□□ -1.87
XRN1YGL173C YGR130CP53278 816 aa3.35□□□□□ -1.87
XRN1YGL173C CBK1P53894 756 aa3.35□□□□□ -1.87
XRN1YGL173C EAR1Q03212 550 aa3.35□□□□□ -1.87
XRN1YGL173C TRS31Q03337 283 aa3.35□□□□□ -1.87
XRN1YGL173C HER1Q12276 1246 aa3.35□□□□□ -1.87
XRN1YGL173C OM45P16547 393 aa3.35□□□□□ -1.87
XRN1YGL173C DGR2P32330 852 aa3.35□□□□□ -1.87
XRN1YGL173C HXT4P32467 576 aa3.35□□□□□ -1.87
XRN1YGL173C TFB1P32776 642 aa3.35□□□□□ -1.87
XRN1YGL173C VPS41P38959 992 aa3.35□□□□□ -1.87
XRN1YGL173C NUP60P39705 539 aa3.35□□□□□ -1.87
XRN1YGL173C FMP10P40098 244 aa3.35□□□□□ -1.87
XRN1YGL173C DLD2P46681 530 aaKnown RBP3.35□□□□□ -1.87
XRN1YGL173C SMC3P47037 1230 aa3.35□□□□□ -1.87
XRN1YGL173C YDL183CP48569 320 aa3.35□□□□□ -1.87
XRN1YGL173C RPN9Q04062 393 aaKnown RBP3.35□□□□□ -1.87
XRN1YGL173C RAD33Q04231 177 aa3.35□□□□□ -1.87
XRN1YGL173C YLR407WQ06070 228 aa3.35□□□□□ -1.87
XRN1YGL173C YLR346CQ06139 101 aa3.35□□□□□ -1.87
XRN1YGL173C APC5Q08683 685 aa3.35□□□□□ -1.87
XRN1YGL173C RKM1Q08961 583 aaPredicted RBP3.35□□□□□ -1.87
XRN1YGL173C REX3Q12090 404 aa3.35□□□□□ -1.87
XRN1YGL173C BRR1Q99177 341 aaPredicted RBP3.35□□□□□ -1.87
XRN1YGL173C ADE6P38972 1358 aaKnown RBP3.35□□□□□ -1.87
XRN1YGL173C PCK1P10963 549 aa3.34□□□□□ -1.87
XRN1YGL173C VPS33P20795 691 aa3.34□□□□□ -1.87
XRN1YGL173C SED4P25365 1065 aa3.34□□□□□ -1.87
XRN1YGL173C PRE4P30657 266 aa3.34□□□□□ -1.87
XRN1YGL173C GIP2P40036 548 aa3.34□□□□□ -1.87
XRN1YGL173C FAR3P46671 204 aa3.34□□□□□ -1.87
XRN1YGL173C TAF4P50105 388 aa3.34□□□□□ -1.87
XRN1YGL173C VPS20Q04272 221 aa3.34□□□□□ -1.87
XRN1YGL173C ECM38Q05902 660 aaPredicted RBP3.34□□□□□ -1.87
XRN1YGL173C ARR3Q06598 404 aa3.34□□□□□ -1.87
XRN1YGL173C OMS1Q06668 471 aa3.34□□□□□ -1.87
XRN1YGL173C RSB1Q08417 382 aa3.34□□□□□ -1.87
XRN1YGL173C UAF30Q08747 228 aa3.34□□□□□ -1.87
XRN1YGL173C KIN82P25341 720 aa3.34□□□□□ -1.87
XRN1YGL173C ADP1P25371 1049 aa3.34□□□□□ -1.87
XRN1YGL173C RDS1P25611 832 aa3.34□□□□□ -1.87
XRN1YGL173C YCR051WP25631 222 aa3.34□□□□□ -1.87
XRN1YGL173C RSC6P25632 483 aa3.34□□□□□ -1.87
XRN1YGL173C YCR061WP25639 631 aa3.34□□□□□ -1.87
XRN1YGL173C IDH2P28241 369 aaKnown RBP3.34□□□□□ -1.87
XRN1YGL173C SWC3P31376 625 aa3.34□□□□□ -1.87
XRN1YGL173C UBP11P36026 717 aa3.34□□□□□ -1.87
XRN1YGL173C MRPL16P38064 232 aa3.34□□□□□ -1.87
XRN1YGL173C ERT1P38140 529 aa3.34□□□□□ -1.87
XRN1YGL173C ACO2P39533 789 aa3.34□□□□□ -1.87
XRN1YGL173C LRO1P40345 661 aa3.34□□□□□ -1.87
XRN1YGL173C SKP2P42843 763 aa3.34□□□□□ -1.87
XRN1YGL173C ATP22P50273 684 aaPredicted RBP3.34□□□□□ -1.87
XRN1YGL173C SHE4P51534 789 aa3.34□□□□□ -1.87
XRN1YGL173C FOL2P51601 243 aaKnown RBP3.34□□□□□ -1.87
XRN1YGL173C TOF1P53840 1238 aa3.34□□□□□ -1.87
XRN1YGL173C YHM2Q04013 314 aa3.34□□□□□ -1.87
XRN1YGL173C LRS4Q04087 347 aaKnown RBP3.34□□□□□ -1.87
XRN1YGL173C TY1A-MR1Q04215 440 aa3.34□□□□□ -1.87
XRN1YGL173C NBA1Q08229 501 aaKnown RBP3.34□□□□□ -1.87
XRN1YGL173C CWC2Q12046 339 aaPredicted RBP3.34□□□□□ -1.87
XRN1YGL173C SKM1Q12469 655 aa3.34□□□□□ -1.87
XRN1YGL173C RPL6BP05739 176 aaKnown RBP3.34□□□□□ -1.87
XRN1YGL173C RPS24AP0CX31 135 aaKnown RBP3.34□□□□□ -1.87
XRN1YGL173C RPS24BP0CX32 135 aaKnown RBP3.34□□□□□ -1.87
XRN1YGL173C PCH2P38126 564 aa3.34□□□□□ -1.87
XRN1YGL173C TAH11P47112 604 aa3.34□□□□□ -1.87
XRN1YGL173C DUO1P53168 247 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms