RNA–Protein interactions for RNA: YGL056C

SDS23, Transcript of Protein involved in cell separation during budding, yeast

Gene SDS23, Length 1,584 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDS23	YGL056C	CIR2	Q08822	631 aa		4.09	□□□□□ -1.75
SDS23	YGL056C	CHS5	Q12114	671 aa	Known RBP	4.09	□□□□□ -1.75
SDS23	YGL056C	PGA3	Q12746	312 aa	Known RBP	4.09	□□□□□ -1.75
SDS23	YGL056C	SUI3	P09064	285 aa	Known RBP	4.08	□□□□□ -1.76
SDS23	YGL056C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
SDS23	YGL056C	MVD1	P32377	396 aa	Known RBP	4.08	□□□□□ -1.76
SDS23	YGL056C	DSS4	P32601	143 aa		4.08	□□□□□ -1.76
SDS23	YGL056C	VMA8	P32610	256 aa	Known RBP	4.08	□□□□□ -1.76
SDS23	YGL056C	ARC1	P46672	376 aa	Known RBP	4.08	□□□□□ -1.76
SDS23	YGL056C	YPL108W	Q02872	168 aa	Predicted RBP	4.08	□□□□□ -1.76
SDS23	YGL056C	RCO1	Q04779	684 aa		4.08	□□□□□ -1.76
SDS23	YGL056C	STP3	Q05937	343 aa		4.08	□□□□□ -1.76
SDS23	YGL056C	ENT4	Q07872	247 aa		4.08	□□□□□ -1.76
SDS23	YGL056C	ATP2	P00830	511 aa	Known RBP	4.07	□□□□□ -1.76
SDS23	YGL056C	ARG3	P05150	338 aa		4.07	□□□□□ -1.76
SDS23	YGL056C	CDC24	P11433	854 aa	Predicted RBP	4.07	□□□□□ -1.76
SDS23	YGL056C	PRP28	P23394	588 aa		4.07	□□□□□ -1.76
SDS23	YGL056C	NPL6	P32832	435 aa		4.07	□□□□□ -1.76
SDS23	YGL056C	LST4	P34239	828 aa		4.07	□□□□□ -1.76
SDS23	YGL056C	NOP4	P37838	685 aa	Known RBP	4.07	□□□□□ -1.76
SDS23	YGL056C	YEL025C	P39991	1188 aa		4.07	□□□□□ -1.76
SDS23	YGL056C	GPD2	P41911	440 aa	Known RBP	4.07	□□□□□ -1.76
SDS23	YGL056C	IDS2	P46958	469 aa		4.07	□□□□□ -1.76
SDS23	YGL056C	MPS3	P47069	682 aa		4.07	□□□□□ -1.76
SDS23	YGL056C	AMA1	P50082	593 aa		4.07	□□□□□ -1.76
SDS23	YGL056C	YGR250C	P53316	781 aa	Known RBP	4.07	□□□□□ -1.76
SDS23	YGL056C	YPL071C	Q02864	156 aa		4.07	□□□□□ -1.76
SDS23	YGL056C	ENB1	Q08299	606 aa		4.07	□□□□□ -1.76
SDS23	YGL056C	NBP2	Q12163	236 aa		4.07	□□□□□ -1.76
SDS23	YGL056C	YOR111W	Q99210	232 aa		4.07	□□□□□ -1.76
SDS23	YGL056C	PNO1	Q99216	274 aa	Known RBP	4.07	□□□□□ -1.76
SDS23	YGL056C	GCN2	P15442	1659 aa		4.07	□□□□□ -1.76
SDS23	YGL056C	SOD2	P00447	233 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	RPS13	P05756	151 aa	Known RBP	4.06	□□□□□ -1.76
SDS23	YGL056C	MET17	P06106	444 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	RED1	P14291	827 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	CKA1	P15790	372 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	ERG8	P24521	451 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	YCR061W	P25639	631 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	YKL050C	P35736	922 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	GEX2	P36173	615 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	MRPL7	P36519	292 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	BUL1	P48524	976 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	MRX6	P48564	524 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	UBC11	P52492	156 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	VPS4	P52917	437 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	RIM8	P53179	542 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	VPS75	P53853	264 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	SSL2	Q00578	843 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	NGL3	Q03210	505 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	SXM1	Q04175	944 aa	Known RBP	4.06	□□□□□ -1.76
SDS23	YGL056C	IZH3	Q07959	543 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	TMA16	Q08687	178 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	TRM13	Q12383	476 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	YBR126W-A	Q8TGU7	68 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	VCX1	Q99385	411 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	DNF1	P32660	1571 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	TY3B-G	Q99315	1547 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	GCN4	P03069	281 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	TRP4	P07285	380 aa	Predicted RBP	4.06	□□□□□ -1.76
SDS23	YGL056C	OPI1	P21957	404 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	VPS34	P22543	875 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	RPC53	P25441	422 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	ERG3	P32353	365 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	SWI3	P32591	825 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	ELO3	P40319	345 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	PAN2	P53010	1115 aa	Predicted RBP	4.06	□□□□□ -1.76
SDS23	YGL056C	DSD1	P53095	428 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	YNR061C	P53747	219 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	CLU1	Q03690	1277 aa	Known RBP	4.06	□□□□□ -1.76
SDS23	YGL056C	RAD30	Q04049	632 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	DLT1	Q04216	342 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	TMA10	Q06177	86 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	PSK2	Q08217	1101 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	IRC13	Q08630	104 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	HUA2	Q12134	243 aa		4.06	□□□□□ -1.76
SDS23	YGL056C	PDR12	Q02785	1511 aa		4.05	□□□□□ -1.76
SDS23	YGL056C	MET3	P08536	511 aa		4.05	□□□□□ -1.76
SDS23	YGL056C	CAF20	P12962	161 aa	Known RBP	4.05	□□□□□ -1.76
SDS23	YGL056C	YCK1	P23291	538 aa		4.05	□□□□□ -1.76
SDS23	YGL056C	URK1	P27515	501 aa		4.05	□□□□□ -1.76
SDS23	YGL056C	GCD7	P32502	381 aa	Predicted RBP	4.05	□□□□□ -1.76
SDS23	YGL056C	MTH1	P35198	433 aa		4.05	□□□□□ -1.76
SDS23	YGL056C	ALY1	P36117	915 aa		4.05	□□□□□ -1.76
SDS23	YGL056C	BUD16	P39988	312 aa		4.05	□□□□□ -1.76
SDS23	YGL056C	LSM5	P40089	93 aa	Known RBP	4.05	□□□□□ -1.76
SDS23	YGL056C	CIR1	P42940	261 aa		4.05	□□□□□ -1.76
SDS23	YGL056C	FCP1	Q03254	732 aa		4.05	□□□□□ -1.76
SDS23	YGL056C	CRF1	Q04930	467 aa		4.05	□□□□□ -1.76
SDS23	YGL056C	YLR352W	Q06479	807 aa		4.05	□□□□□ -1.76
SDS23	YGL056C	MLH3	Q12083	715 aa		4.05	□□□□□ -1.76
SDS23	YGL056C	NUP159	P40477	1460 aa		4.04	□□□□□ -1.76
SDS23	YGL056C	BUD3	P25558	1636 aa		4.04	□□□□□ -1.76
SDS23	YGL056C	SIR3	P06701	978 aa		4.04	□□□□□ -1.76
SDS23	YGL056C	SEC53	P07283	254 aa	Known RBP	4.04	□□□□□ -1.76
SDS23	YGL056C	KAR3	P17119	729 aa		4.04	□□□□□ -1.76
SDS23	YGL056C	ROX1	P25042	368 aa		4.04	□□□□□ -1.76
SDS23	YGL056C	PHO11	P35842	467 aa		4.04	□□□□□ -1.76
SDS23	YGL056C	BYE1	P36106	594 aa		4.04	□□□□□ -1.76
SDS23	YGL056C	CTP1	P38152	299 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms