RNA–Protein interactions for RNA: YER011W

TIR1, Transcript of Cell wall mannoprotein, yeast

Gene TIR1, Length 765 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR1	YER011W	NDI1	P32340	513 aa		13.78	□□□□□ -0.2
TIR1	YER011W	AIM23	P47015	356 aa		13.78	□□□□□ -0.2
TIR1	YER011W	STR3	P53101	465 aa	Known RBP	13.78	□□□□□ -0.2
TIR1	YER011W	AIM14	P53109	570 aa		13.78	□□□□□ -0.2
TIR1	YER011W	PIR1	Q03178	341 aa		13.78	□□□□□ -0.2
TIR1	YER011W	CMS1	Q07897	291 aa	Known RBP	13.78	□□□□□ -0.2
TIR1	YER011W	LDB17	Q12342	491 aa		13.78	□□□□□ -0.2
TIR1	YER011W	YME1	P32795	747 aa		13.77	□□□□□ -0.21
TIR1	YER011W	PEX5	P35056	612 aa		13.77	□□□□□ -0.21
TIR1	YER011W	DPH1	P40487	425 aa	Known RBP	13.77	□□□□□ -0.21
TIR1	YER011W	BIO5	P53744	561 aa	Known RBP	13.77	□□□□□ -0.21
TIR1	YER011W	YNR061C	P53747	219 aa		13.77	□□□□□ -0.21
TIR1	YER011W	TEP1	P53916	434 aa		13.77	□□□□□ -0.21
TIR1	YER011W	RPL34A	P87262	121 aa	Predicted RBP	13.77	□□□□□ -0.21
TIR1	YER011W	RSB1	Q08417	382 aa		13.77	□□□□□ -0.21
TIR1	YER011W	NOP58	Q12499	511 aa	Known RBP	13.77	□□□□□ -0.21
TIR1	YER011W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	13.76	□□□□□ -0.21	not detected
TIR1	YER011W	SRP101	P32916	621 aa		13.76	□□□□□ -0.21
TIR1	YER011W	STE13	P33894	931 aa		13.76	□□□□□ -0.21
TIR1	YER011W	DSF2	P38213	736 aa		13.76	□□□□□ -0.21
TIR1	YER011W	ALA1	P40825	983 aa	Known RBP	13.76	□□□□□ -0.21
TIR1	YER011W	REG1	Q00816	1014 aa		13.76	□□□□□ -0.21
TIR1	YER011W	RSC4	Q02206	625 aa		13.76	□□□□□ -0.21
TIR1	YER011W	SHR3	Q02774	210 aa		13.76	□□□□□ -0.21
TIR1	YER011W	CET1	O13297	549 aa	Predicted RBP	13.75	□□□□□ -0.21
TIR1	YER011W	RPB2	P08518	1224 aa	Known RBP	13.75	□□□□□ -0.21
TIR1	YER011W	SCH9	P11792	824 aa	Known RBP	13.75	□□□□□ -0.21
TIR1	YER011W	KAR4	P25583	335 aa		13.75	□□□□□ -0.21
TIR1	YER011W	OSW5	P40219	148 aa		13.75	□□□□□ -0.21
TIR1	YER011W	BUD13	P46947	266 aa	Predicted RBP	13.75	□□□□□ -0.21
TIR1	YER011W	IPI3	P53877	555 aa		13.75	□□□□□ -0.21
TIR1	YER011W	FRA1	Q07825	749 aa		13.75	□□□□□ -0.21
TIR1	YER011W	CUE5	Q08412	411 aa	Known RBP	13.75	□□□□□ -0.21
TIR1	YER011W	TRE2	Q08693	809 aa		13.75	□□□□□ -0.21
TIR1	YER011W	PER33	Q12144	273 aa		13.75	□□□□□ -0.21
TIR1	YER011W	MSF1	P08425	469 aa		13.74	□□□□□ -0.21
TIR1	YER011W	YCL068C	P25593	260 aa		13.74	□□□□□ -0.21
TIR1	YER011W	URA10	P30402	227 aa		13.74	□□□□□ -0.21
TIR1	YER011W	LIP5	P32875	414 aa		13.74	□□□□□ -0.21
TIR1	YER011W	ARP1	P38696	384 aa		13.74	□□□□□ -0.21
TIR1	YER011W	SMX2	P40204	77 aa	Known RBP	13.74	□□□□□ -0.21
TIR1	YER011W	YIR007W	P40566	764 aa		13.74	□□□□□ -0.21
TIR1	YER011W	PRM1	P53835	661 aa		13.74	□□□□□ -0.21
TIR1	YER011W	ORC3	P54790	616 aa		13.74	□□□□□ -0.21
TIR1	YER011W	ADE13	Q05911	482 aa	Known RBP	13.74	□□□□□ -0.21
TIR1	YER011W	LCB5	Q06147	687 aa	Known RBP	13.74	□□□□□ -0.21
TIR1	YER011W	YPR084W	Q06821	456 aa		13.74	□□□□□ -0.21
TIR1	YER011W	TEF1	P02994	458 aa	Known RBP	13.73	□□□□□ -0.21
TIR1	YER011W	RAD1	P06777	1100 aa		13.73	□□□□□ -0.21
TIR1	YER011W	ILS1	P09436	1072 aa	Known RBP	13.73	□□□□□ -0.21
TIR1	YER011W	HSP60	P19882	572 aa	Known RBP	13.73	□□□□□ -0.21
TIR1	YER011W	CLN1	P20437	546 aa		13.73	□□□□□ -0.21
TIR1	YER011W	SMI1	P32566	505 aa		13.73	□□□□□ -0.21
TIR1	YER011W	MUD2	P36084	527 aa	Known RBP	13.73	□□□□□ -0.21
TIR1	YER011W	TFA2	P36145	328 aa		13.73	□□□□□ -0.21
TIR1	YER011W	CCT2	P39076	527 aa	Known RBP	13.73	□□□□□ -0.21
TIR1	YER011W	YFL012W	P43580	148 aa		13.73	□□□□□ -0.21
TIR1	YER011W	LSB3	P43603	459 aa	Known RBP	13.73	□□□□□ -0.21
TIR1	YER011W	NMA2	P53204	395 aa		13.73	□□□□□ -0.21
TIR1	YER011W	STE23	Q06010	1027 aa		13.73	□□□□□ -0.21
TIR1	YER011W	MRPL25	P23369	157 aa		13.72	□□□□□ -0.21
TIR1	YER011W	YJU3	P28321	313 aa		13.72	□□□□□ -0.21
TIR1	YER011W	PXA2	P34230	853 aa		13.72	□□□□□ -0.21
TIR1	YER011W	ALY1	P36117	915 aa		13.72	□□□□□ -0.21
TIR1	YER011W	PAN6	P40459	309 aa		13.72	□□□□□ -0.21
TIR1	YER011W	RSM7	P47150	247 aa		13.72	□□□□□ -0.21
TIR1	YER011W	ZIP2	P53061	704 aa		13.72	□□□□□ -0.21
TIR1	YER011W	ART5	P53244	586 aa	Known RBP	13.72	□□□□□ -0.21
TIR1	YER011W	RBK1	P25332	333 aa		13.71	□□□□□ -0.21
TIR1	YER011W	RAD26	P40352	1085 aa		13.71	□□□□□ -0.21
TIR1	YER011W	SIP4	P46954	829 aa		13.71	□□□□□ -0.21
TIR1	YER011W	URB2	P47108	1174 aa		13.71	□□□□□ -0.21
TIR1	YER011W	KTR5	P53966	522 aa	Predicted RBP	13.71	□□□□□ -0.21
TIR1	YER011W	NUP100	Q02629	959 aa		13.71	□□□□□ -0.21
TIR1	YER011W	YPR114W	Q06107	315 aa		13.71	□□□□□ -0.21
TIR1	YER011W	SLD7	Q08457	257 aa		13.71	□□□□□ -0.21
TIR1	YER011W	ARG4	P04076	463 aa	Predicted RBP	13.7	□□□□□ -0.22
TIR1	YER011W	MNE1	P24720	663 aa		13.7	□□□□□ -0.22
TIR1	YER011W	DCC1	P25559	380 aa		13.7	□□□□□ -0.22
TIR1	YER011W	ECM32	P32644	1121 aa	Known RBP	13.7	□□□□□ -0.22
TIR1	YER011W	LTV1	P34078	463 aa		13.7	□□□□□ -0.22
TIR1	YER011W	REF2	P42073	533 aa	Predicted RBP	13.7	□□□□□ -0.22
TIR1	YER011W	YKL068W-A	Q3E826	78 aa		13.7	□□□□□ -0.22
TIR1	YER011W	YSP3	P25036	478 aa		13.69	□□□□□ -0.22
TIR1	YER011W	AEP1	P32493	518 aa		13.69	□□□□□ -0.22
TIR1	YER011W	SAP1	P39955	897 aa	Known RBP	13.69	□□□□□ -0.22
TIR1	YER011W	SLX8	P40072	274 aa		13.69	□□□□□ -0.22
TIR1	YER011W	YJR124C	P47159	448 aa		13.69	□□□□□ -0.22
TIR1	YER011W	NOP15	P53927	220 aa	Predicted RBP	13.69	□□□□□ -0.22
TIR1	YER011W	EFM6	P53970	246 aa		13.69	□□□□□ -0.22
TIR1	YER011W	TRS31	Q03337	283 aa		13.69	□□□□□ -0.22
TIR1	YER011W	MEX67	Q99257	599 aa	Known RBP	13.69	□□□□□ -0.22
TIR1	YER011W	LEU1	P07264	779 aa	Known RBP	13.68	□□□□□ -0.22
TIR1	YER011W	GPA2	P10823	449 aa		13.68	□□□□□ -0.22
TIR1	YER011W	SEC63	P14906	663 aa		13.68	□□□□□ -0.22
TIR1	YER011W	PMA2	P19657	947 aa		13.68	□□□□□ -0.22
TIR1	YER011W	ILV6	P25605	309 aa	Known RBP	13.68	□□□□□ -0.22
TIR1	YER011W	PYC2	P32327	1180 aa	Known RBP	13.68	□□□□□ -0.22
TIR1	YER011W	SPT23	P35210	1082 aa		13.68	□□□□□ -0.22
TIR1	YER011W	RGI2	P40188	164 aa		13.68	□□□□□ -0.22

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms