RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDB1	YBR221C	MCH5	Q08777	521 aa		5.81	□□□□□ -1.48
PDB1	YBR221C	CWC2	Q12046	339 aa	Predicted RBP	5.81	□□□□□ -1.48
PDB1	YBR221C	GET3	Q12154	354 aa	Known RBP	5.81	□□□□□ -1.48
PDB1	YBR221C	TY3A-G	Q12173	290 aa		5.81	□□□□□ -1.48
PDB1	YBR221C	GPM3	Q12326	303 aa		5.81	□□□□□ -1.48
PDB1	YBR221C	AVL9	Q12500	764 aa		5.81	□□□□□ -1.48
PDB1	YBR221C	TY3A-I	Q99219	290 aa		5.81	□□□□□ -1.48
PDB1	YBR221C	CET1	O13297	549 aa	Predicted RBP	5.8	□□□□□ -1.48
PDB1	YBR221C	RPP2B	P02400	110 aa	Known RBP	5.8	□□□□□ -1.48
PDB1	YBR221C	ADE3	P07245	946 aa	Known RBP	5.8	□□□□□ -1.48
PDB1	YBR221C	FBP1	P09201	348 aa		5.8	□□□□□ -1.48
PDB1	YBR221C	RPL19A	P0CX82	189 aa	Known RBP	5.8	□□□□□ -1.48
PDB1	YBR221C	RPL19B	P0CX83	189 aa	Predicted RBP	5.8	□□□□□ -1.48
PDB1	YBR221C	BET2	P20133	325 aa		5.8	□□□□□ -1.48
PDB1	YBR221C	CAD1	P24813	409 aa	Known RBP	5.8	□□□□□ -1.48
PDB1	YBR221C	CLB3	P24870	427 aa		5.8	□□□□□ -1.48
PDB1	YBR221C	SEC65	P29478	273 aa		5.8	□□□□□ -1.48
PDB1	YBR221C	ITR1	P30605	584 aa		5.8	□□□□□ -1.48
PDB1	YBR221C	DEP1	P31385	405 aa		5.8	□□□□□ -1.48
PDB1	YBR221C	GCD11	P32481	527 aa	Known RBP	5.8	□□□□□ -1.48
PDB1	YBR221C	CUE2	P36075	443 aa	Known RBP	5.8	□□□□□ -1.48
PDB1	YBR221C	GPT2	P36148	743 aa		5.8	□□□□□ -1.48
PDB1	YBR221C	FAT1	P38225	669 aa		5.8	□□□□□ -1.48
PDB1	YBR221C	ICP55	P40051	511 aa		5.8	□□□□□ -1.48
PDB1	YBR221C	SCS2	P40075	244 aa	Known RBP	5.8	□□□□□ -1.48
PDB1	YBR221C	YJR061W	P40355	935 aa		5.8	□□□□□ -1.48
PDB1	YBR221C	ULI1	P43604	169 aa		5.8	□□□□□ -1.48
PDB1	YBR221C	MRX6	P48564	524 aa		5.8	□□□□□ -1.48
PDB1	YBR221C	EST2	Q06163	884 aa		5.8	□□□□□ -1.48
PDB1	YBR221C	RBD2	Q12270	262 aa		5.8	□□□□□ -1.48
PDB1	YBR221C	YOL159C-A	Q3E769	90 aa		5.8	□□□□□ -1.48
PDB1	YBR221C	YBR126W-A	Q8TGU7	68 aa		5.8	□□□□□ -1.48
PDB1	YBR221C	Q0182	Q9ZZW1	134 aa		5.8	□□□□□ -1.48
PDB1	YBR221C	PMD1	P32634	1753 aa		5.8	□□□□□ -1.48
PDB1	YBR221C	ADH4	P10127	382 aa		5.79	□□□□□ -1.48
PDB1	YBR221C	AMS1	P22855	1083 aa		5.79	□□□□□ -1.48
PDB1	YBR221C	PER1	P25625	357 aa		5.79	□□□□□ -1.48
PDB1	YBR221C	PEP3	P27801	918 aa		5.79	□□□□□ -1.48
PDB1	YBR221C	SRP101	P32916	621 aa		5.79	□□□□□ -1.48
PDB1	YBR221C	REC104	P33323	182 aa		5.79	□□□□□ -1.48
PDB1	YBR221C	ASH1	P34233	588 aa		5.79	□□□□□ -1.48
PDB1	YBR221C	BMH2	P34730	273 aa	Known RBP	5.79	□□□□□ -1.48
PDB1	YBR221C	YKL023W	P36103	277 aa	Known RBP	5.79	□□□□□ -1.48
PDB1	YBR221C	SET3	P36124	751 aa		5.79	□□□□□ -1.48
PDB1	YBR221C	ADH5	P38113	351 aa	Known RBP	5.79	□□□□□ -1.48
PDB1	YBR221C	MMS4	P38257	691 aa		5.79	□□□□□ -1.48
PDB1	YBR221C	EFM2	P38347	419 aa		5.79	□□□□□ -1.48
PDB1	YBR221C	MUP3	P38734	546 aa		5.79	□□□□□ -1.48
PDB1	YBR221C	TCD1	P38756	429 aa		5.79	□□□□□ -1.48
PDB1	YBR221C	KEL1	P38853	1164 aa	Known RBP	5.79	□□□□□ -1.48
PDB1	YBR221C	LYS9	P38999	446 aa		5.79	□□□□□ -1.48
PDB1	YBR221C	PAC1	P39946	494 aa	Known RBP	5.79	□□□□□ -1.48
PDB1	YBR221C	FTR1	P40088	404 aa		5.79	□□□□□ -1.48
PDB1	YBR221C	YIL077C	P40508	320 aa		5.79	□□□□□ -1.48
PDB1	YBR221C	LOC1	P43586	204 aa	Predicted RBP	5.79	□□□□□ -1.48
PDB1	YBR221C	ALK1	P43633	760 aa	Known RBP	5.79	□□□□□ -1.48
PDB1	YBR221C	CLA4	P48562	842 aa		5.79	□□□□□ -1.48
PDB1	YBR221C	ELP4	Q02884	456 aa	Known RBP	5.79	□□□□□ -1.48
PDB1	YBR221C	VPS64	Q03944	604 aa		5.79	□□□□□ -1.48
PDB1	YBR221C	RRN11	Q04712	507 aa		5.79	□□□□□ -1.48
PDB1	YBR221C	RCN2	Q12044	265 aa		5.79	□□□□□ -1.48
PDB1	YBR221C	NBP2	Q12163	236 aa		5.79	□□□□□ -1.48
PDB1	YBR221C	WTM2	Q12206	467 aa		5.79	□□□□□ -1.48
PDB1	YBR221C	LDB19	Q12502	818 aa		5.79	□□□□□ -1.48
PDB1	YBR221C	BRR1	Q99177	341 aa	Predicted RBP	5.79	□□□□□ -1.48
PDB1	YBR221C	ADE2	P21264	571 aa	Known RBP	5.78	□□□□□ -1.48
PDB1	YBR221C	CPR2	P23285	205 aa		5.78	□□□□□ -1.48
PDB1	YBR221C	MGM101	P32787	269 aa	Known RBP	5.78	□□□□□ -1.48
PDB1	YBR221C	BUD2	P33314	1104 aa		5.78	□□□□□ -1.48
PDB1	YBR221C	STE13	P33894	931 aa		5.78	□□□□□ -1.48
PDB1	YBR221C	CTF13	P35203	478 aa		5.78	□□□□□ -1.48
PDB1	YBR221C	PHO11	P35842	467 aa		5.78	□□□□□ -1.48
PDB1	YBR221C	PHO12	P38693	467 aa		5.78	□□□□□ -1.48
PDB1	YBR221C	YHR054C	P38780	354 aa		5.78	□□□□□ -1.48
PDB1	YBR221C	STT3	P39007	718 aa	Known RBP	5.78	□□□□□ -1.48
PDB1	YBR221C	EAF5	P39995	279 aa		5.78	□□□□□ -1.48
PDB1	YBR221C	UTP7	P40055	554 aa	Known RBP	5.78	□□□□□ -1.48
PDB1	YBR221C	MPH1	P40562	993 aa		5.78	□□□□□ -1.48
PDB1	YBR221C	ARC1	P46672	376 aa	Known RBP	5.78	□□□□□ -1.48
PDB1	YBR221C	NUP85	P46673	744 aa		5.78	□□□□□ -1.48
PDB1	YBR221C	SIP4	P46954	829 aa		5.78	□□□□□ -1.48
PDB1	YBR221C	ENP2	P48234	707 aa	Known RBP	5.78	□□□□□ -1.48
PDB1	YBR221C	ASE1	P50275	885 aa		5.78	□□□□□ -1.48
PDB1	YBR221C	JIP4	Q03361	876 aa		5.78	□□□□□ -1.48
PDB1	YBR221C	EFR3	Q03653	782 aa	Known RBP	5.78	□□□□□ -1.48
PDB1	YBR221C	UTP5	Q04177	643 aa	Known RBP	5.78	□□□□□ -1.48
PDB1	YBR221C	SSQ1	Q05931	657 aa	Predicted RBP	5.78	□□□□□ -1.48
PDB1	YBR221C	EMG1	Q06287	252 aa	Known RBP	5.78	□□□□□ -1.48
PDB1	YBR221C	MMR1	Q06324	491 aa		5.78	□□□□□ -1.48
PDB1	YBR221C	FMP45	Q07651	309 aa		5.78	□□□□□ -1.48
PDB1	YBR221C	SLK19	Q08581	821 aa	Known RBP	5.78	□□□□□ -1.48
PDB1	YBR221C	YOR296W	Q08748	1289 aa		5.78	□□□□□ -1.48
PDB1	YBR221C	RPN5	Q12250	445 aa	Known RBP	5.78	□□□□□ -1.48
PDB1	YBR221C	YOR111W	Q99210	232 aa		5.78	□□□□□ -1.48
PDB1	YBR221C	MLP1	Q02455	1875 aa	Known RBP	5.77	□□□□□ -1.49
PDB1	YBR221C	CAR2	P07991	424 aa	Known RBP	5.77	□□□□□ -1.49
PDB1	YBR221C	SUI3	P09064	285 aa	Known RBP	5.77	□□□□□ -1.49
PDB1	YBR221C	CDC24	P11433	854 aa	Predicted RBP	5.77	□□□□□ -1.49
PDB1	YBR221C	STE11	P23561	717 aa		5.77	□□□□□ -1.49
PDB1	YBR221C	YCR051W	P25631	222 aa		5.77	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms