RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

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Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 A330070K13RikQ8CA53 115 aa5.98□□□□□ -1.45
Sh3rf1-202ENSMUST00000209611 Gm28230A0A0A0MQ91 144 aa5.97□□□□□ -1.45
Sh3rf1-202ENSMUST00000209611 Gm44790A0A0N4SV91 103 aa5.97□□□□□ -1.45
Sh3rf1-202ENSMUST00000209611 C130032M10RikQ8C888 123 aa5.97□□□□□ -1.45
Sh3rf1-202ENSMUST00000209611 Defb13Q8R2I4 64 aa5.97□□□□□ -1.45
Sh3rf1-202ENSMUST00000209611 Huwe1Q7TMY8 4377 aaKnown RBP5.96□□□□□ -1.45
Sh3rf1-202ENSMUST00000209611 Limd2Q8BGB5 128 aa5.96□□□□□ -1.45
Sh3rf1-202ENSMUST00000209611 Q8BGJ3 129 aa5.96□□□□□ -1.45
Sh3rf1-202ENSMUST00000209611 Q8BT88 171 aa5.96□□□□□ -1.45
Sh3rf1-202ENSMUST00000209611 2310050C09RikG5E8Z3 280 aa5.96□□□□□ -1.46
Sh3rf1-202ENSMUST00000209611 Gm10139O88245 57 aa5.94□□□□□ -1.46
Sh3rf1-202ENSMUST00000209611 4933415A04RikQ9D443 101 aa5.94□□□□□ -1.46
Sh3rf1-202ENSMUST00000209611 Cypt15B1AXS0 87 aa5.93□□□□□ -1.46
Sh3rf1-202ENSMUST00000209611 6030445D17RikE9Q8F9 148 aa5.93□□□□□ -1.46
Sh3rf1-202ENSMUST00000209611 Gm21886J3QJU9 214 aa5.93□□□□□ -1.46
Sh3rf1-202ENSMUST00000209611 Krtap29-1A2A5X4 342 aa5.92□□□□□ -1.46
Sh3rf1-202ENSMUST00000209611 RetnlbQ99P86 105 aa5.92□□□□□ -1.46
Sh3rf1-202ENSMUST00000209611 HrnrQ8VHD8 2496 aa5.92□□□□□ -1.46
Sh3rf1-202ENSMUST00000209611 PrkdcP97313 4128 aa5.91□□□□□ -1.46
Sh3rf1-202ENSMUST00000209611 Cypt14J3QPF7 87 aa5.91□□□□□ -1.46
Sh3rf1-202ENSMUST00000209611 Dnah11E9Q7N9 4488 aa5.91□□□□□ -1.46
Sh3rf1-202ENSMUST00000209611 Dnah9B1AR51 4484 aa5.9□□□□□ -1.46
Sh3rf1-202ENSMUST00000209611 NbdyA0A0N4SUI7 68 aa5.9□□□□□ -1.46
Sh3rf1-202ENSMUST00000209611 Igkv8-19A0A0G2JFN8 121 aa5.89□□□□□ -1.47
Sh3rf1-202ENSMUST00000209611 Gpr15lA0A0B4J1N3 78 aa5.89□□□□□ -1.47
Sh3rf1-202ENSMUST00000209611 Megf8P60882 2789 aa5.87□□□□□ -1.47
Sh3rf1-202ENSMUST00000209611 Gm9918Q8BUR5 174 aa5.86□□□□□ -1.47
Sh3rf1-202ENSMUST00000209611 Muc6Q80T03 2850 aa5.85□□□□□ -1.47
Sh3rf1-202ENSMUST00000209611 Krtap10-4Q08EG8 221 aa5.85□□□□□ -1.47
Sh3rf1-202ENSMUST00000209611 Tenm2Q9WTS5 2764 aa5.85□□□□□ -1.47
Sh3rf1-202ENSMUST00000209611 PlecQ9QXS1 4691 aaKnown RBP5.85□□□□□ -1.47
Sh3rf1-202ENSMUST00000209611 Odf3bQ5M8M2 238 aa5.85□□□□□ -1.47
Sh3rf1-202ENSMUST00000209611 Chtf8P0CG14 533 aa5.83□□□□□ -1.48
Sh3rf1-202ENSMUST00000209611 Rpl37aP61514 92 aa5.83□□□□□ -1.48
Sh3rf1-202ENSMUST00000209611 Anapc11Q9CPX9 84 aa5.83□□□□□ -1.48
Sh3rf1-202ENSMUST00000209611 Dnah7aE9Q0T8 4024 aa5.82□□□□□ -1.48
Sh3rf1-202ENSMUST00000209611 Defb39Q70KL3 74 aa5.82□□□□□ -1.48
Sh3rf1-202ENSMUST00000209611 Gm37013Q8K491 104 aa5.82□□□□□ -1.48
Sh3rf1-202ENSMUST00000209611 Defb1P56386 69 aa5.81□□□□□ -1.48
Sh3rf1-202ENSMUST00000209611 Prm2P07978 107 aa5.81□□□□□ -1.48
Sh3rf1-202ENSMUST00000209611 Dnah7cA0A087WR13 4024 aa5.8□□□□□ -1.48
Sh3rf1-202ENSMUST00000209611 CriptO70333 101 aa5.8□□□□□ -1.48
Sh3rf1-202ENSMUST00000209611 Rnase13Q5GAM7 153 aa5.78□□□□□ -1.48
Sh3rf1-202ENSMUST00000209611 Gm21887J3QQ04 176 aa5.77□□□□□ -1.49
Sh3rf1-202ENSMUST00000209611 Krtap13O88375 197 aa5.77□□□□□ -1.49
Sh3rf1-202ENSMUST00000209611 Krtap14O08640 167 aa5.76□□□□□ -1.49
Sh3rf1-202ENSMUST00000209611 Uqcr11Q9CPX8 56 aa5.76□□□□□ -1.49
Sh3rf1-202ENSMUST00000209611 Tnp2P11378 117 aa5.76□□□□□ -1.49
Sh3rf1-202ENSMUST00000209611 Wfdc3Q14AE4 130 aa5.75□□□□□ -1.49
Sh3rf1-202ENSMUST00000209611 2310034C09RikQ9D746 214 aa5.74□□□□□ -1.49
Sh3rf1-202ENSMUST00000209611 Spaca4Q80ZQ0 127 aa5.72□□□□□ -1.49
Sh3rf1-202ENSMUST00000209611 Gm10999F6Q4M4 69 aa5.71□□□□□ -1.5
Sh3rf1-202ENSMUST00000209611 Krtap10-10A0A1W2P7T6 217 aa5.71□□□□□ -1.5
Sh3rf1-202ENSMUST00000209611 Gm3880A0A1B0GSB3 72 aa5.7□□□□□ -1.5
Sh3rf1-202ENSMUST00000209611 Gm16253D3Z167 63 aa5.69□□□□□ -1.5
Sh3rf1-202ENSMUST00000209611 Gm2696A0A1W2P709 240 aa5.68□□□□□ -1.5
Sh3rf1-202ENSMUST00000209611 Vps13dB1ART2 4390 aa5.67□□□□□ -1.5
Sh3rf1-202ENSMUST00000209611 Dnah5Q8VHE6 4621 aa5.67□□□□□ -1.5
Sh3rf1-202ENSMUST00000209611 Gm17606F6ZL36 78 aa5.65□□□□□ -1.51
Sh3rf1-202ENSMUST00000209611 Sec61bQ9CQS8 96 aaKnown RBP5.64□□□□□ -1.51
Sh3rf1-202ENSMUST00000209611 Pkd1O08852 4293 aa5.64□□□□□ -1.51
Sh3rf1-202ENSMUST00000209611 Ndufaf8A2AMZ4 74 aa5.64□□□□□ -1.51
Sh3rf1-202ENSMUST00000209611 Hectd4E9Q2E4 4418 aa5.63□□□□□ -1.51
Sh3rf1-202ENSMUST00000209611 Gm2310J3QNJ2 377 aa5.62□□□□□ -1.51
Sh3rf1-202ENSMUST00000209611 Dnah2P0C6F1 4456 aa5.61□□□□□ -1.51
Sh3rf1-202ENSMUST00000209611 Romo1P60603 79 aa5.6□□□□□ -1.51
Sh3rf1-202ENSMUST00000209611 ApobE9Q414 4505 aa5.59□□□□□ -1.51
Sh3rf1-202ENSMUST00000209611 Pkhd1E9PZ36 4059 aa5.57□□□□□ -1.52
Sh3rf1-202ENSMUST00000209611 Stard9Q80TF6 4561 aa5.53□□□□□ -1.52
Sh3rf1-202ENSMUST00000209611 Gm9112A2AI92 75 aa5.53□□□□□ -1.52
Sh3rf1-202ENSMUST00000209611 Gm21798J3QNU5 87 aa5.48□□□□□ -1.53
Sh3rf1-202ENSMUST00000209611 Lrp1bQ9JI18 4599 aa5.43□□□□□ -1.54
Sh3rf1-202ENSMUST00000209611 Gm4491E0CX42 125 aa5.43□□□□□ -1.54
Sh3rf1-202ENSMUST00000209611 4930507D05RikQ8C9C9 103 aa5.41□□□□□ -1.54
Sh3rf1-202ENSMUST00000209611 Fat1A0A1L1SQU7 4645 aa5.41□□□□□ -1.54
Sh3rf1-202ENSMUST00000209611 Rps29P62274 56 aa5.41□□□□□ -1.54
Sh3rf1-202ENSMUST00000209611 Fat2Q5F226 4351 aa5.4□□□□□ -1.55
Sh3rf1-202ENSMUST00000209611 Dync1h1Q9JHU4 4644 aaKnown RBP5.37□□□□□ -1.55
Sh3rf1-202ENSMUST00000209611 SacsQ9JLC8 4582 aa5.35□□□□□ -1.55
Sh3rf1-202ENSMUST00000209611 Pkhd1l1Q80ZA4 4249 aa5.33□□□□□ -1.56
Sh3rf1-202ENSMUST00000209611 Ryr3A2AGL3 4863 aa5.3□□□□□ -1.56
Sh3rf1-202ENSMUST00000209611 Vps13bQ80TY5 3993 aa5.29□□□□□ -1.56
Sh3rf1-202ENSMUST00000209611 Gm5767A0A0J9YTU8 78 aa5.27□□□□□ -1.57
Sh3rf1-202ENSMUST00000209611 Krtap19-5O08632 62 aa5.25□□□□□ -1.57
Sh3rf1-202ENSMUST00000209611 Gm10382Q3V0T5 144 aa5.25□□□□□ -1.57
Sh3rf1-202ENSMUST00000209611 Ryr2E9Q401 4966 aaKnown RBP5.24□□□□□ -1.57
Sh3rf1-202ENSMUST00000209611 Kmt2cQ8BRH4 4903 aa5.22□□□□□ -1.57
Sh3rf1-202ENSMUST00000209611 D6Ertd527eA0A0N4SWI3 464 aa5.21□□□□□ -1.58
Sh3rf1-202ENSMUST00000209611 Krtap15-1Q9QZU5 150 aa5.2□□□□□ -1.58
Sh3rf1-202ENSMUST00000209611 Gm11939A2A592 99 aa5.2□□□□□ -1.58
Sh3rf1-202ENSMUST00000209611 Gm9955Q8CEJ8 102 aa5.17□□□□□ -1.58
Sh3rf1-202ENSMUST00000209611 Gm9736A0A1W2P7N1 277 aa5.17□□□□□ -1.58
Sh3rf1-202ENSMUST00000209611 A930033H14RikG5E8X6 103 aa5.16□□□□□ -1.58
Sh3rf1-202ENSMUST00000209611 Krtap3-2Q9D638 99 aa5.16□□□□□ -1.58
Sh3rf1-202ENSMUST00000209611 Krtap3-3Q9D7P0 99 aa5.16□□□□□ -1.58
Sh3rf1-202ENSMUST00000209611 Gm5965D3Z724 196 aa5.15□□□□□ -1.58
Sh3rf1-202ENSMUST00000209611 2310079G19RikQ9D6L6 185 aa5.14□□□□□ -1.59
Sh3rf1-202ENSMUST00000209611 2310057N15RikQ9D6T8 200 aa5.14□□□□□ -1.59
Sh3rf1-202ENSMUST00000209611 Rpl37Q9D823 97 aa5.13□□□□□ -1.59
Sh3rf1-202ENSMUST00000209611 Lrp1Q91ZX7 4545 aaKnown RBP5.09□□□□□ -1.6
Retrieved 100 of 22,080 RNA–protein pairs in 248.4 ms