RNA–Protein interactions for RNA: ENSMUST00000192221.5

Pcdh9-202, Transcript of Protocadherin 9, mousemouse

TSL 1 (best) BASIC

Gene Pcdh9, Length 5,161 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-202ENSMUST00000192221 HrnrQ8VHD8 2496 aa3.54□□□□□ -1.84
Pcdh9-202ENSMUST00000192221 Fam168bQ80XQ8 194 aa3.54□□□□□ -1.84
Pcdh9-202ENSMUST00000192221 Prrc2cQ3TLH4 2846 aaKnown RBP3.53□□□□□ -1.84
Pcdh9-202ENSMUST00000192221 NbdyA0A0N4SUI7 68 aa3.53□□□□□ -1.84
Pcdh9-202ENSMUST00000192221 Akap13E9Q394 2776 aa3.53□□□□□ -1.84
Pcdh9-202ENSMUST00000192221 Dync2h1Q45VK7 4306 aa3.52□□□□□ -1.85
Pcdh9-202ENSMUST00000192221 Gm3233E9Q2H5 230 aa3.52□□□□□ -1.85
Pcdh9-202ENSMUST00000192221 Gm17349F7BGH6 99 aa3.52□□□□□ -1.85
Pcdh9-202ENSMUST00000192221 2310050C09RikG5E8Z3 280 aa3.51□□□□□ -1.85
Pcdh9-202ENSMUST00000192221 Huwe1Q7TMY8 4377 aaKnown RBP3.51□□□□□ -1.85
Pcdh9-202ENSMUST00000192221 Plac8Q9JI48 112 aa3.51□□□□□ -1.85
Pcdh9-202ENSMUST00000192221 Dnah6E9Q0B6 4144 aa3.5□□□□□ -1.85
Pcdh9-202ENSMUST00000192221 Abca12E9Q876 2595 aa3.5□□□□□ -1.85
Pcdh9-202ENSMUST00000192221 Krtap13O88375 197 aa3.5□□□□□ -1.85
Pcdh9-202ENSMUST00000192221 Unc79Q0KK59 2596 aa3.49□□□□□ -1.85
Pcdh9-202ENSMUST00000192221 TgO08710 2766 aa3.48□□□□□ -1.85
Pcdh9-202ENSMUST00000192221 Tnp1P10856 55 aa3.48□□□□□ -1.85
Pcdh9-202ENSMUST00000192221 Zfp292Q9Z2U2 2698 aa3.48□□□□□ -1.85
Pcdh9-202ENSMUST00000192221 Krtap4-2B1AQ85 167 aa3.48□□□□□ -1.85
Pcdh9-202ENSMUST00000192221 Hectd4E9Q2E4 4418 aa3.48□□□□□ -1.85
Pcdh9-202ENSMUST00000192221 Usp24B1AY13 2617 aaKnown RBP3.48□□□□□ -1.85
Pcdh9-202ENSMUST00000192221 Tenm2Q9WTS5 2764 aa3.48□□□□□ -1.85
Pcdh9-202ENSMUST00000192221 Ankrd11E9Q4F7 2643 aa3.47□□□□□ -1.85
Pcdh9-202ENSMUST00000192221 Cep192E9Q4Y4 2514 aaKnown RBP3.46□□□□□ -1.86
Pcdh9-202ENSMUST00000192221 Dmbt1Q60997 2085 aa3.46□□□□□ -1.86
Pcdh9-202ENSMUST00000192221 Hectd1Q69ZR2 2618 aaKnown RBP3.46□□□□□ -1.86
Pcdh9-202ENSMUST00000192221 Prm2P07978 107 aa3.45□□□□□ -1.86
Pcdh9-202ENSMUST00000192221 Setd2E9Q5F9 2537 aa3.45□□□□□ -1.86
Pcdh9-202ENSMUST00000192221 Sprr1aQ62266 144 aa3.45□□□□□ -1.86
Pcdh9-202ENSMUST00000192221 Fn1P11276 2477 aaKnown RBP3.44□□□□□ -1.86
Pcdh9-202ENSMUST00000192221 Gm7138L7N2C3 230 aa3.44□□□□□ -1.86
Pcdh9-202ENSMUST00000192221 Gm3238W4VSP7 230 aa3.44□□□□□ -1.86
Pcdh9-202ENSMUST00000192221 Dnah10D3YYQ8 4591 aa3.44□□□□□ -1.86
Pcdh9-202ENSMUST00000192221 Pkd1O08852 4293 aa3.44□□□□□ -1.86
Pcdh9-202ENSMUST00000192221 Myo18bE9PV66 2605 aa3.44□□□□□ -1.86
Pcdh9-202ENSMUST00000192221 FasnP19096 2504 aaKnown RBP3.43□□□□□ -1.86
Pcdh9-202ENSMUST00000192221 Bahcc1Q3UHR0 2643 aa3.43□□□□□ -1.86
Pcdh9-202ENSMUST00000192221 Anapc11Q9CPX9 84 aa3.42□□□□□ -1.86
Pcdh9-202ENSMUST00000192221 Krtap29-1A2A5X4 342 aa3.42□□□□□ -1.86
Pcdh9-202ENSMUST00000192221 Gm11939A2A592 99 aa3.41□□□□□ -1.86
Pcdh9-202ENSMUST00000192221 Gm36176A0A1W2P8D5 158 aa3.41□□□□□ -1.86
Pcdh9-202ENSMUST00000192221 Dnah14A0A140LIJ4 4489 aa3.41□□□□□ -1.86
Pcdh9-202ENSMUST00000192221 FlnaQ8BTM8 2647 aaKnown RBP3.4□□□□□ -1.87
Pcdh9-202ENSMUST00000192221 Gm10139O88245 57 aa3.38□□□□□ -1.87
Pcdh9-202ENSMUST00000192221 Gm16253D3Z167 63 aa3.38□□□□□ -1.87
Pcdh9-202ENSMUST00000192221 PrkdcP97313 4128 aa3.37□□□□□ -1.87
Pcdh9-202ENSMUST00000192221 Rps29P62274 56 aa3.37□□□□□ -1.87
Pcdh9-202ENSMUST00000192221 2310057N15RikQ9D6T8 200 aa3.37□□□□□ -1.87
Pcdh9-202ENSMUST00000192221 Nbeal1E9PYP2 2688 aa3.37□□□□□ -1.87
Pcdh9-202ENSMUST00000192221 CicQ924A2 2510 aa3.37□□□□□ -1.87
Pcdh9-202ENSMUST00000192221 Mast4Q811L6 2618 aa3.36□□□□□ -1.87
Pcdh9-202ENSMUST00000192221 Gm7137J3QMW1 236 aa3.36□□□□□ -1.87
Pcdh9-202ENSMUST00000192221 TnxbO35452 4006 aa3.35□□□□□ -1.87
Pcdh9-202ENSMUST00000192221 FlnbQ80X90 2602 aaKnown RBP3.34□□□□□ -1.87
Pcdh9-202ENSMUST00000192221 Gm5965D3Z724 196 aa3.34□□□□□ -1.87
Pcdh9-202ENSMUST00000192221 Krtap14O08640 167 aa3.34□□□□□ -1.88
Pcdh9-202ENSMUST00000192221 VwfQ8CIZ8 2813 aa3.33□□□□□ -1.88
Pcdh9-202ENSMUST00000192221 Cystm1Q8K353 104 aa3.33□□□□□ -1.88
Pcdh9-202ENSMUST00000192221 2310061N02RikQ9D6S9 174 aa3.33□□□□□ -1.88
Pcdh9-202ENSMUST00000192221 Gm5767A0A0J9YTU8 78 aa3.32□□□□□ -1.88
Pcdh9-202ENSMUST00000192221 Pdzd2E9Q1M1 2796 aa3.32□□□□□ -1.88
Pcdh9-202ENSMUST00000192221 Stard9Q80TF6 4561 aa3.31□□□□□ -1.88
Pcdh9-202ENSMUST00000192221 Itpr3P70227 2670 aa3.3□□□□□ -1.88
Pcdh9-202ENSMUST00000192221 Dnah2P0C6F1 4456 aa3.3□□□□□ -1.88
Pcdh9-202ENSMUST00000192221 NipblQ6KCD5 2798 aaKnown RBP3.3□□□□□ -1.88
Pcdh9-202ENSMUST00000192221 Notch1Q01705 2531 aa3.28□□□□□ -1.88
Pcdh9-202ENSMUST00000192221 Utp20Q5XG71 2788 aaKnown RBP3.28□□□□□ -1.88
Pcdh9-202ENSMUST00000192221 Itpr1P11881 2749 aa3.27□□□□□ -1.89
Pcdh9-202ENSMUST00000192221 AtrQ9JKK8 2635 aa3.27□□□□□ -1.89
Pcdh9-202ENSMUST00000192221 Dnah5Q8VHE6 4621 aa3.26□□□□□ -1.89
Pcdh9-202ENSMUST00000192221 Tnp2P11378 117 aa3.26□□□□□ -1.89
Pcdh9-202ENSMUST00000192221 Kmt2bO08550 2713 aa3.25□□□□□ -1.89
Pcdh9-202ENSMUST00000192221 A730071L15RikQ8C4X0 137 aa3.24□□□□□ -1.89
Pcdh9-202ENSMUST00000192221 Megf8P60882 2789 aa3.24□□□□□ -1.89
Pcdh9-202ENSMUST00000192221 Dnah17Q69Z23 4481 aa3.23□□□□□ -1.89
Pcdh9-202ENSMUST00000192221 4933428G20RikQ9D3X4 101 aa3.23□□□□□ -1.89
Pcdh9-202ENSMUST00000192221 FlncQ8VHX6 2726 aaKnown RBP3.22□□□□□ -1.89
Pcdh9-202ENSMUST00000192221 Nsd1O88491 2588 aaKnown RBP3.21□□□□□ -1.9
Pcdh9-202ENSMUST00000192221 Fat2Q5F226 4351 aa3.21□□□□□ -1.9
Pcdh9-202ENSMUST00000192221 D6Ertd527eA0A0N4SWI3 464 aa3.2□□□□□ -1.9
Pcdh9-202ENSMUST00000192221 Krtap3-2Q9D638 99 aa3.2□□□□□ -1.9
Pcdh9-202ENSMUST00000192221 Krtap3-3Q9D7P0 99 aa3.2□□□□□ -1.9
Pcdh9-202ENSMUST00000192221 Gcn1E9PVA8 2671 aaKnown RBP3.2□□□□□ -1.9
Pcdh9-202ENSMUST00000192221 Pkhd1l1Q80ZA4 4249 aa3.19□□□□□ -1.9
Pcdh9-202ENSMUST00000192221 Stab1Q8R4Y4 2571 aa3.19□□□□□ -1.9
Pcdh9-202ENSMUST00000192221 Igsf10Q3V1M1 2594 aa3.19□□□□□ -1.9
Pcdh9-202ENSMUST00000192221 Gm9507D3Z5T3 223 aa3.19□□□□□ -1.9
Pcdh9-202ENSMUST00000192221 Tep1P97499 2629 aa3.19□□□□□ -1.9
Pcdh9-202ENSMUST00000192221 ApobE9Q414 4505 aa3.18□□□□□ -1.9
Pcdh9-202ENSMUST00000192221 Gm2310J3QNJ2 377 aa3.18□□□□□ -1.9
Pcdh9-202ENSMUST00000192221 Tenm4Q3UHK6 2771 aa3.18□□□□□ -1.9
Pcdh9-202ENSMUST00000192221 Gm9508A0A1W2P7W0 230 aa3.17□□□□□ -1.9
Pcdh9-202ENSMUST00000192221 9530053A07RikE9PVG8 2581 aa3.16□□□□□ -1.9
Pcdh9-202ENSMUST00000192221 Tex15F8VPN2 2785 aa3.14□□□□□ -1.91
Pcdh9-202ENSMUST00000192221 Muc6Q80T03 2850 aa3.13□□□□□ -1.91
Pcdh9-202ENSMUST00000192221 FcgbpE9Q0B5 2583 aa3.12□□□□□ -1.91
Pcdh9-202ENSMUST00000192221 Itpr2Q9Z329 2701 aa3.12□□□□□ -1.91
Pcdh9-202ENSMUST00000192221 Muc2Q80Z19 2680 aa3.11□□□□□ -1.91
Pcdh9-202ENSMUST00000192221 A930033H14RikG5E8X6 103 aa3.11□□□□□ -1.91
Pcdh9-202ENSMUST00000192221 B930094E09RikQ8C4T2 136 aa3.1□□□□□ -1.91
Retrieved 100 of 22,080 RNA–protein pairs in 1405.5 ms