RNA–Protein interactions for RNA: ENSMUST00000176172.7

Cux1-206, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cux1, Length 4,882 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-206ENSMUST00000176172 SmcpP15265 143 aa9.57□□□□□ -0.88
Cux1-206ENSMUST00000176172 1700042G07RikB1AUF7 90 aa9.56□□□□□ -0.88
Cux1-206ENSMUST00000176172 Gm10382Q3V0T5 144 aa9.56□□□□□ -0.88
Cux1-206ENSMUST00000176172 Celsr3Q91ZI0 3301 aa9.55□□□□□ -0.88
Cux1-206ENSMUST00000176172 Lama1P19137 3084 aa9.53□□□□□ -0.88
Cux1-206ENSMUST00000176172 Chd9Q8BYH8 2885 aa9.5□□□□□ -0.89
Cux1-206ENSMUST00000176172 Cox6b2Q80ZN9 88 aa9.5□□□□□ -0.89
Cux1-206ENSMUST00000176172 Pdzd2E9Q1M1 2796 aa9.49□□□□□ -0.89
Cux1-206ENSMUST00000176172 Brca2P97929 3329 aa9.48□□□□□ -0.89
Cux1-206ENSMUST00000176172 Trank1Q8BV79 2999 aa9.45□□□□□ -0.9
Cux1-206ENSMUST00000176172 Krtap10-10A0A1W2P7T6 217 aa9.44□□□□□ -0.9
Cux1-206ENSMUST00000176172 Nf1Q04690 2841 aa9.39□□□□□ -0.91
Cux1-206ENSMUST00000176172 Col6a3E9PWQ3 3284 aa9.37□□□□□ -0.91
Cux1-206ENSMUST00000176172 D6Ertd527eA0A0N4SWI3 464 aa9.33□□□□□ -0.92
Cux1-206ENSMUST00000176172 Dchs2A0A0A6YW72 3346 aa9.32□□□□□ -0.92
Cux1-206ENSMUST00000176172 Tenm3Q9WTS6 2715 aa9.31□□□□□ -0.92
Cux1-206ENSMUST00000176172 VcanQ62059 3357 aa9.23□□□□□ -0.93
Cux1-206ENSMUST00000176172 Gm2696A0A1W2P709 240 aa9.22□□□□□ -0.93
Cux1-206ENSMUST00000176172 Wdfy3Q6VNB8 3508 aa9.2□□□□□ -0.94
Cux1-206ENSMUST00000176172 Tenm1Q9WTS4 2731 aa9.2□□□□□ -0.94
Cux1-206ENSMUST00000176172 Helz2E9QAM5 2947 aaKnown RBP9.11□□□□□ -0.95
Cux1-206ENSMUST00000176172 LrbaQ9ESE1 2856 aa9.1□□□□□ -0.95
Cux1-206ENSMUST00000176172 Gm5965D3Z724 196 aa9.06□□□□□ -0.96
Cux1-206ENSMUST00000176172 Myo15aQ9QZZ4 3511 aa9.04□□□□□ -0.96
Cux1-206ENSMUST00000176172 Dchs1E9PVD3 3291 aa9.04□□□□□ -0.96
Cux1-206ENSMUST00000176172 DmdP11531 3678 aa9□□□□□ -0.97
Cux1-206ENSMUST00000176172 Gm21887J3QQ04 176 aa8.99□□□□□ -0.97
Cux1-206ENSMUST00000176172 RelnQ60841 3461 aa8.97□□□□□ -0.97
Cux1-206ENSMUST00000176172 SpegQ62407 3262 aa8.89□□□□□ -0.99
Cux1-206ENSMUST00000176172 Tenm2Q9WTS5 2764 aa8.89□□□□□ -0.99
Cux1-206ENSMUST00000176172 2310057N15RikQ9D6T8 200 aa8.84□□□□□ -0.99
Cux1-206ENSMUST00000176172 Megf8P60882 2789 aa8.84□□□□□ -0.99
Cux1-206ENSMUST00000176172 Gm40193A0A1B0GT39 78 aa8.81□□□□□ -1
Cux1-206ENSMUST00000176172 Ndufaf8A2AMZ4 74 aa8.8□□□□□ -1
Cux1-206ENSMUST00000176172 A930033H14RikG5E8X6 103 aa8.8□□□□□ -1
Cux1-206ENSMUST00000176172 Tnp1P10856 55 aa8.78□□□□□ -1
Cux1-206ENSMUST00000176172 Gm20537G3UYK7 97 aa8.76□□□□□ -1.01
Cux1-206ENSMUST00000176172 Vps13cQ8BX70 3748 aa8.75□□□□□ -1.01
Cux1-206ENSMUST00000176172 Akap9Q70FJ1 3797 aa8.73□□□□□ -1.01
Cux1-206ENSMUST00000176172 2310079G19RikQ9D6L6 185 aa8.69□□□□□ -1.02
Cux1-206ENSMUST00000176172 Gm17416Q30KP4 66 aa8.66□□□□□ -1.02
Cux1-206ENSMUST00000176172 Zfhx3Q61329 3726 aa8.63□□□□□ -1.03
Cux1-206ENSMUST00000176172 B930094E09RikQ8C4T2 136 aa8.63□□□□□ -1.03
Cux1-206ENSMUST00000176172 OtogO55225 2910 aa8.61□□□□□ -1.03
Cux1-206ENSMUST00000176172 SpenQ62504 3644 aaKnown RBP8.6□□□□□ -1.03
Cux1-206ENSMUST00000176172 Csmd1Q923L3 3564 aa8.59□□□□□ -1.03
Cux1-206ENSMUST00000176172 Muc5acE9QAQ8 3455 aa8.56□□□□□ -1.04
Cux1-206ENSMUST00000176172 VwfQ8CIZ8 2813 aa8.53□□□□□ -1.04
Cux1-206ENSMUST00000176172 Gm9112A2AI92 75 aa8.49□□□□□ -1.05
Cux1-206ENSMUST00000176172 Smg1Q8BKX6 3658 aaKnown RBP8.49□□□□□ -1.05
Cux1-206ENSMUST00000176172 2210017I01RikA0A0A6YVV1 95 aa8.48□□□□□ -1.05
Cux1-206ENSMUST00000176172 Zfhx4Q9JJN2 3550 aa8.45□□□□□ -1.06
Cux1-206ENSMUST00000176172 Gm884A2A9H6 3643 aa8.38□□□□□ -1.07
Cux1-206ENSMUST00000176172 Gm9736A0A1W2P7N1 277 aa8.38□□□□□ -1.07
Cux1-206ENSMUST00000176172 Lama5Q61001 3718 aa8.36□□□□□ -1.07
Cux1-206ENSMUST00000176172 Gm17402F6Z0L5 76 aa8.35□□□□□ -1.07
Cux1-206ENSMUST00000176172 Col7a1Q63870 2944 aa8.25□□□□□ -1.09
Cux1-206ENSMUST00000176172 Gm11939A2A592 99 aa8.21□□□□□ -1.09
Cux1-206ENSMUST00000176172 Fbn1Q61554 2873 aaKnown RBP8.21□□□□□ -1.1
Cux1-206ENSMUST00000176172 Svep1A2AVA0 3567 aa8.1□□□□□ -1.11
Cux1-206ENSMUST00000176172 Krtap19-5O08632 62 aa8.07□□□□□ -1.12
Cux1-206ENSMUST00000176172 Prm2P07978 107 aa8.05□□□□□ -1.12
Cux1-206ENSMUST00000176172 Gm9918Q8BUR5 174 aa8.02□□□□□ -1.12
Cux1-206ENSMUST00000176172 Muc6Q80T03 2850 aa8.02□□□□□ -1.13
Cux1-206ENSMUST00000176172 Cmya5Q70KF4 3739 aa8□□□□□ -1.13
Cux1-206ENSMUST00000176172 Muc4Q8JZM8 3443 aa7.98□□□□□ -1.13
Cux1-206ENSMUST00000176172 Krtap13-1Q8K198 168 aa7.97□□□□□ -1.13
Cux1-206ENSMUST00000176172 Gm19668J3QMD1 248 aa7.94□□□□□ -1.14
Cux1-206ENSMUST00000176172 Krtap3-2Q9D638 99 aa7.94□□□□□ -1.14
Cux1-206ENSMUST00000176172 Krtap3-3Q9D7P0 99 aa7.94□□□□□ -1.14
Cux1-206ENSMUST00000176172 Gm10318A0A1W2P728 225 aa7.83□□□□□ -1.16
Cux1-206ENSMUST00000176172 Krtap3-1A2A591 98 aa7.81□□□□□ -1.16
Cux1-206ENSMUST00000176172 Crct1Q6PAI5 102 aa7.75□□□□□ -1.17
Cux1-206ENSMUST00000176172 Csmd2V9GX34 3611 aa7.73□□□□□ -1.17
Cux1-206ENSMUST00000176172 4933428G20RikQ9D3X4 101 aa7.71□□□□□ -1.18
Cux1-206ENSMUST00000176172 Ank2Q8C8R3 3898 aa7.49□□□□□ -1.21
Cux1-206ENSMUST00000176172 LystP97412 3788 aa7.39□□□□□ -1.23
Cux1-206ENSMUST00000176172 CubnQ9JLB4 3623 aa7.37□□□□□ -1.23
Cux1-206ENSMUST00000176172 Krtap1-5A2A590 122 aa7.33□□□□□ -1.24
Cux1-206ENSMUST00000176172 Sprr2a3Q4KL71 83 aa7.28□□□□□ -1.24
Cux1-206ENSMUST00000176172 Sprr2a1Q9CQK8 83 aa7.28□□□□□ -1.24
Cux1-206ENSMUST00000176172 Dnah14A0A140LIJ4 4489 aa7.21□□□□□ -1.26
Cux1-206ENSMUST00000176172 Krtap19-9aF8WH65 55 aa7.19□□□□□ -1.26
Cux1-206ENSMUST00000176172 Stard9Q80TF6 4561 aa7.16□□□□□ -1.26
Cux1-206ENSMUST00000176172 Dnah5Q8VHE6 4621 aa7.15□□□□□ -1.27
Cux1-206ENSMUST00000176172 Xirp2Q4U4S6 3784 aa7.13□□□□□ -1.27
Cux1-206ENSMUST00000176172 Krtap1-4Q3V2D6 188 aa7.12□□□□□ -1.27
Cux1-206ENSMUST00000176172 Gm6358A0A087WPH4 74 aa7.1□□□□□ -1.27
Cux1-206ENSMUST00000176172 Dnah10D3YYQ8 4591 aa7.09□□□□□ -1.27
Cux1-206ENSMUST00000176172 Krtap7-1Q9D3I6 87 aa7.04□□□□□ -1.28
Cux1-206ENSMUST00000176172 BsnO88737 3942 aa7.03□□□□□ -1.28
Cux1-206ENSMUST00000176172 Huwe1Q7TMY8 4377 aaKnown RBP7.03□□□□□ -1.28
Cux1-206ENSMUST00000176172 Krtap8-1O08633 61 aa7.02□□□□□ -1.28
Cux1-206ENSMUST00000176172 Vps13dB1ART2 4390 aa7.01□□□□□ -1.29
Cux1-206ENSMUST00000176172 LorP18165 486 aa7□□□□□ -1.29
Cux1-206ENSMUST00000176172 PlecQ9QXS1 4691 aaKnown RBP6.99□□□□□ -1.29
Cux1-206ENSMUST00000176172 Krtap19-9bQ99NG9 58 aa6.98□□□□□ -1.29
Cux1-206ENSMUST00000176172 Gm18596A0A1W2P860 280 aa6.96□□□□□ -1.3
Cux1-206ENSMUST00000176172 Hspg2Q05793 3707 aaKnown RBP6.92□□□□□ -1.3
Cux1-206ENSMUST00000176172 Krtap12-1Q9Z287 130 aa6.91□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms