RNA–Protein interactions for RNA: ENSMUST00000166236.8

Ccr9-203, Transcript of C-C chemokine receptor type 9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccr9, Length 5,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9-203ENSMUST00000166236 LrbaQ9ESE1 2856 aa3.67□□□□□ -1.82
Ccr9-203ENSMUST00000166236 Phxr4P15974 95 aa3.66□□□□□ -1.82
Ccr9-203ENSMUST00000166236 Nbeal2Q6ZQA0 2742 aa3.66□□□□□ -1.82
Ccr9-203ENSMUST00000166236 Pdzd2E9Q1M1 2796 aa3.66□□□□□ -1.82
Ccr9-203ENSMUST00000166236 Rnase13Q5GAM7 153 aa3.65□□□□□ -1.82
Ccr9-203ENSMUST00000166236 Gm9507D3Z5T3 223 aa3.65□□□□□ -1.82
Ccr9-203ENSMUST00000166236 Chtf8P0CG14 533 aa3.65□□□□□ -1.82
Ccr9-203ENSMUST00000166236 Uqcr11Q9CPX8 56 aa3.65□□□□□ -1.83
Ccr9-203ENSMUST00000166236 Rps29P62274 56 aa3.64□□□□□ -1.83
Ccr9-203ENSMUST00000166236 Tex15F8VPN2 2785 aa3.64□□□□□ -1.83
Ccr9-203ENSMUST00000166236 Lama5Q61001 3718 aa3.63□□□□□ -1.83
Ccr9-203ENSMUST00000166236 Krtap14O08640 167 aa3.63□□□□□ -1.83
Ccr9-203ENSMUST00000166236 Gm9821Q8K076 103 aa3.62□□□□□ -1.83
Ccr9-203ENSMUST00000166236 Srrm2Q8BTI8 2703 aaKnown RBP3.62□□□□□ -1.83
Ccr9-203ENSMUST00000166236 Chd9Q8BYH8 2885 aa3.62□□□□□ -1.83
Ccr9-203ENSMUST00000166236 Cystm1Q8K353 104 aa3.62□□□□□ -1.83
Ccr9-203ENSMUST00000166236 Gm21887J3QQ04 176 aa3.61□□□□□ -1.83
Ccr9-203ENSMUST00000166236 A0A286YCP9 139 aa3.61□□□□□ -1.83
Ccr9-203ENSMUST00000166236 Krtap13O88375 197 aa3.61□□□□□ -1.83
Ccr9-203ENSMUST00000166236 Pla2g10Q9QXX3 151 aa3.6□□□□□ -1.83
Ccr9-203ENSMUST00000166236 Pkd1l1Q8R526 2615 aa3.59□□□□□ -1.83
Ccr9-203ENSMUST00000166236 2310034C09RikQ9D746 214 aa3.59□□□□□ -1.83
Ccr9-203ENSMUST00000166236 Mp68P56379 58 aa3.59□□□□□ -1.84
Ccr9-203ENSMUST00000166236 Gm2310J3QNJ2 377 aa3.58□□□□□ -1.84
Ccr9-203ENSMUST00000166236 FcgbpE9Q0B5 2583 aa3.57□□□□□ -1.84
Ccr9-203ENSMUST00000166236 ApcQ61315 2845 aa3.56□□□□□ -1.84
Ccr9-203ENSMUST00000166236 SpenQ62504 3644 aaKnown RBP3.56□□□□□ -1.84
Ccr9-203ENSMUST00000166236 Gm4491E0CX42 125 aa3.56□□□□□ -1.84
Ccr9-203ENSMUST00000166236 HrnrQ8VHD8 2496 aa3.56□□□□□ -1.84
Ccr9-203ENSMUST00000166236 Spink7Q6IE32 76 aa3.55□□□□□ -1.84
Ccr9-203ENSMUST00000166236 Krtap15-1Q9QZU5 150 aa3.54□□□□□ -1.84
Ccr9-203ENSMUST00000166236 TgO08710 2766 aa3.54□□□□□ -1.84
Ccr9-203ENSMUST00000166236 Gm5767A0A0J9YTU8 78 aa3.54□□□□□ -1.84
Ccr9-203ENSMUST00000166236 Smg1Q8BKX6 3658 aaKnown RBP3.54□□□□□ -1.84
Ccr9-203ENSMUST00000166236 Muc5acE9QAQ8 3455 aa3.53□□□□□ -1.84
Ccr9-203ENSMUST00000166236 Gm21798J3QNU5 87 aa3.53□□□□□ -1.85
Ccr9-203ENSMUST00000166236 Krtap10-4Q08EG8 221 aa3.52□□□□□ -1.85
Ccr9-203ENSMUST00000166236 Sec61bQ9CQS8 96 aaKnown RBP3.52□□□□□ -1.85
Ccr9-203ENSMUST00000166236 Fbn1Q61554 2873 aaKnown RBP3.51□□□□□ -1.85
Ccr9-203ENSMUST00000166236 Csmd1Q923L3 3564 aa3.48□□□□□ -1.85
Ccr9-203ENSMUST00000166236 Fam229aB2KGE5 128 aa3.46□□□□□ -1.85
Ccr9-203ENSMUST00000166236 SmcpP15265 143 aa3.45□□□□□ -1.86
Ccr9-203ENSMUST00000166236 Gm9955Q8CEJ8 102 aa3.45□□□□□ -1.86
Ccr9-203ENSMUST00000166236 Svep1A2AVA0 3567 aa3.44□□□□□ -1.86
Ccr9-203ENSMUST00000166236 Tenm1Q9WTS4 2731 aa3.44□□□□□ -1.86
Ccr9-203ENSMUST00000166236 Gm2696A0A1W2P709 240 aa3.43□□□□□ -1.86
Ccr9-203ENSMUST00000166236 D6Ertd527eA0A0N4SWI3 464 aa3.43□□□□□ -1.86
Ccr9-203ENSMUST00000166236 CriptO70333 101 aa3.43□□□□□ -1.86
Ccr9-203ENSMUST00000166236 Gm3880A0A1B0GSB3 72 aa3.43□□□□□ -1.86
Ccr9-203ENSMUST00000166236 Helz2E9QAM5 2947 aaKnown RBP3.43□□□□□ -1.86
Ccr9-203ENSMUST00000166236 Col7a1Q63870 2944 aa3.42□□□□□ -1.86
Ccr9-203ENSMUST00000166236 Rpl37Q9D823 97 aa3.4□□□□□ -1.87
Ccr9-203ENSMUST00000166236 LystP97412 3788 aa3.39□□□□□ -1.87
Ccr9-203ENSMUST00000166236 Csmd2V9GX34 3611 aa3.38□□□□□ -1.87
Ccr9-203ENSMUST00000166236 Camk2n1Q6QWF9 78 aa3.38□□□□□ -1.87
Ccr9-203ENSMUST00000166236 Cmya5Q70KF4 3739 aa3.38□□□□□ -1.87
Ccr9-203ENSMUST00000166236 Gm9918Q8BUR5 174 aa3.38□□□□□ -1.87
Ccr9-203ENSMUST00000166236 Gm19426M0QWC7 77 aa3.34□□□□□ -1.88
Ccr9-203ENSMUST00000166236 Cox6b2Q80ZN9 88 aa3.33□□□□□ -1.88
Ccr9-203ENSMUST00000166236 Dnah14A0A140LIJ4 4489 aa3.32□□□□□ -1.88
Ccr9-203ENSMUST00000166236 4933415A04RikQ9D443 101 aa3.32□□□□□ -1.88
Ccr9-203ENSMUST00000166236 A930033H14RikG5E8X6 103 aa3.31□□□□□ -1.88
Ccr9-203ENSMUST00000166236 Dnah17Q69Z23 4481 aa3.3□□□□□ -1.88
Ccr9-203ENSMUST00000166236 BC029722A0A0N4SW31 51 aa3.3□□□□□ -1.88
Ccr9-203ENSMUST00000166236 Lce1mQ9CR91 182 aa3.3□□□□□ -1.88
Ccr9-203ENSMUST00000166236 Huwe1Q7TMY8 4377 aaKnown RBP3.29□□□□□ -1.88
Ccr9-203ENSMUST00000166236 Tenm2Q9WTS5 2764 aa3.29□□□□□ -1.88
Ccr9-203ENSMUST00000166236 Megf8P60882 2789 aa3.28□□□□□ -1.88
Ccr9-203ENSMUST00000166236 Gm3646F6S692 53 aa3.28□□□□□ -1.88
Ccr9-203ENSMUST00000166236 TnxbO35452 4006 aa3.28□□□□□ -1.88
Ccr9-203ENSMUST00000166236 Gm5965D3Z724 196 aa3.26□□□□□ -1.89
Ccr9-203ENSMUST00000166236 VwfQ8CIZ8 2813 aa3.26□□□□□ -1.89
Ccr9-203ENSMUST00000166236 Gm17416Q30KP4 66 aa3.24□□□□□ -1.89
Ccr9-203ENSMUST00000166236 2310079G19RikQ9D6L6 185 aa3.23□□□□□ -1.89
Ccr9-203ENSMUST00000166236 Dnah3Q8BW94 4083 aa3.21□□□□□ -1.9
Ccr9-203ENSMUST00000166236 Muc4Q8JZM8 3443 aa3.2□□□□□ -1.9
Ccr9-203ENSMUST00000166236 Krtap19-5O08632 62 aa3.2□□□□□ -1.9
Ccr9-203ENSMUST00000166236 Gm18596A0A1W2P860 280 aa3.19□□□□□ -1.9
Ccr9-203ENSMUST00000166236 Muc6Q80T03 2850 aa3.19□□□□□ -1.9
Ccr9-203ENSMUST00000166236 Xirp2Q4U4S6 3784 aa3.19□□□□□ -1.9
Ccr9-203ENSMUST00000166236 Gm11939A2A592 99 aa3.18□□□□□ -1.9
Ccr9-203ENSMUST00000166236 Romo1P60603 79 aa3.18□□□□□ -1.9
Ccr9-203ENSMUST00000166236 2310057N15RikQ9D6T8 200 aa3.18□□□□□ -1.9
Ccr9-203ENSMUST00000166236 Gm10382Q3V0T5 144 aa3.18□□□□□ -1.9
Ccr9-203ENSMUST00000166236 Vps13dB1ART2 4390 aa3.17□□□□□ -1.9
Ccr9-203ENSMUST00000166236 PlecQ9QXS1 4691 aaKnown RBP3.16□□□□□ -1.9
Ccr9-203ENSMUST00000166236 Dync2h1Q45VK7 4306 aa3.16□□□□□ -1.9
Ccr9-203ENSMUST00000166236 1700042G07RikB1AUF7 90 aa3.15□□□□□ -1.9
Ccr9-203ENSMUST00000166236 Kmt2aP55200 3966 aa3.15□□□□□ -1.91
Ccr9-203ENSMUST00000166236 2210017I01RikA0A0A6YVV1 95 aa3.13□□□□□ -1.91
Ccr9-203ENSMUST00000166236 Dnah6E9Q0B6 4144 aa3.12□□□□□ -1.91
Ccr9-203ENSMUST00000166236 Gm9736A0A1W2P7N1 277 aa3.12□□□□□ -1.91
Ccr9-203ENSMUST00000166236 CubnQ9JLB4 3623 aa3.11□□□□□ -1.91
Ccr9-203ENSMUST00000166236 Krtap3-2Q9D638 99 aa3.11□□□□□ -1.91
Ccr9-203ENSMUST00000166236 Krtap3-3Q9D7P0 99 aa3.11□□□□□ -1.91
Ccr9-203ENSMUST00000166236 Dnah5Q8VHE6 4621 aa3.09□□□□□ -1.91
Ccr9-203ENSMUST00000166236 Dnah1E9Q8T7 4250 aa3.09□□□□□ -1.91
Ccr9-203ENSMUST00000166236 PrkdcP97313 4128 aa3.08□□□□□ -1.92
Ccr9-203ENSMUST00000166236 Dnah10D3YYQ8 4591 aa3.08□□□□□ -1.92
Ccr9-203ENSMUST00000166236 Dnah11E9Q7N9 4488 aa3.07□□□□□ -1.92
Retrieved 100 of 22,080 RNA–protein pairs in 100 ms