RNA–Protein interactions for RNA: ENSMUST00000062606.7

Upk3b-201, Transcript of Uroplakin-3b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3b, Length 3,530 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3b-201ENSMUST00000062606 Cox6a2P43023 97 aa7.6□□□□□ -1.19
Upk3b-201ENSMUST00000062606 HrnrQ8VHD8 2496 aa7.59□□□□□ -1.19
Upk3b-201ENSMUST00000062606 Dnah2P0C6F1 4456 aa7.58□□□□□ -1.2
Upk3b-201ENSMUST00000062606 Nupr2Q497P3 102 aa7.56□□□□□ -1.2
Upk3b-201ENSMUST00000062606 Gm9508A0A1W2P7W0 230 aa7.56□□□□□ -1.2
Upk3b-201ENSMUST00000062606 2310050C09RikG5E8Z3 280 aa7.56□□□□□ -1.2
Upk3b-201ENSMUST00000062606 Wfdc3Q14AE4 130 aa7.56□□□□□ -1.2
Upk3b-201ENSMUST00000062606 Pla2g10Q9QXX3 151 aa7.55□□□□□ -1.2
Upk3b-201ENSMUST00000062606 Camk2n2Q78WH7 79 aa7.55□□□□□ -1.2
Upk3b-201ENSMUST00000062606 Defb38Q7TNV7 63 aa7.54□□□□□ -1.2
Upk3b-201ENSMUST00000062606 1700012A03RikQ9DAF1 130 aa7.53□□□□□ -1.2
Upk3b-201ENSMUST00000062606 A730009L09RikA0A1B0GS82 72 aa7.52□□□□□ -1.21
Upk3b-201ENSMUST00000062606 Dnah9B1AR51 4484 aa7.51□□□□□ -1.21
Upk3b-201ENSMUST00000062606 Gm9507D3Z5T3 223 aa7.49□□□□□ -1.21
Upk3b-201ENSMUST00000062606 Ly6g6cQ9Z1Q4 126 aa7.49□□□□□ -1.21
Upk3b-201ENSMUST00000062606 Gm10267M0QWD8 85 aa7.49□□□□□ -1.21
Upk3b-201ENSMUST00000062606 PscaP57096 123 aa7.46□□□□□ -1.22
Upk3b-201ENSMUST00000062606 Dnah11E9Q7N9 4488 aa7.46□□□□□ -1.22
Upk3b-201ENSMUST00000062606 Zcchc13Q9D548 170 aa7.44□□□□□ -1.22
Upk3b-201ENSMUST00000062606 Ryr2E9Q401 4966 aaKnown RBP7.42□□□□□ -1.22
Upk3b-201ENSMUST00000062606 Sprr4Q8CGN8 76 aa7.41□□□□□ -1.22
Upk3b-201ENSMUST00000062606 Uqcr11Q9CPX8 56 aa7.41□□□□□ -1.22
Upk3b-201ENSMUST00000062606 1700018G05RikA0A1B0GSI2 66 aa7.4□□□□□ -1.22
Upk3b-201ENSMUST00000062606 TgO08710 2766 aa7.4□□□□□ -1.23
Upk3b-201ENSMUST00000062606 Sprr1aQ62266 144 aa7.4□□□□□ -1.23
Upk3b-201ENSMUST00000062606 Defb9Q8R2I6 67 aa7.39□□□□□ -1.23
Upk3b-201ENSMUST00000062606 Dnah5Q8VHE6 4621 aa7.38□□□□□ -1.23
Upk3b-201ENSMUST00000062606 Rpl37aP61514 92 aa7.36□□□□□ -1.23
Upk3b-201ENSMUST00000062606 Fam168bQ80XQ8 194 aa7.36□□□□□ -1.23
Upk3b-201ENSMUST00000062606 Dmac1Q9CQ00 111 aa7.36□□□□□ -1.23
Upk3b-201ENSMUST00000062606 Odf3bQ5M8M2 238 aa7.36□□□□□ -1.23
Upk3b-201ENSMUST00000062606 Pkhd1l1Q80ZA4 4249 aa7.34□□□□□ -1.23
Upk3b-201ENSMUST00000062606 P84750 121 aa7.34□□□□□ -1.23
Upk3b-201ENSMUST00000062606 Pkhd1E9PZ36 4059 aa7.32□□□□□ -1.24
Upk3b-201ENSMUST00000062606 Gm10065F6TJM2 114 aa7.32□□□□□ -1.24
Upk3b-201ENSMUST00000062606 Dync1h1Q9JHU4 4644 aaKnown RBP7.32□□□□□ -1.24
Upk3b-201ENSMUST00000062606 Gm11627A6PWP4 55 aa7.3□□□□□ -1.24
Upk3b-201ENSMUST00000062606 Prol1E9PYQ4 312 aa7.27□□□□□ -1.25
Upk3b-201ENSMUST00000062606 Wfdc10Q3V2J9 124 aa7.27□□□□□ -1.25
Upk3b-201ENSMUST00000062606 Gm28230A0A0A0MQ91 144 aa7.27□□□□□ -1.25
Upk3b-201ENSMUST00000062606 Krtap29-1A2A5X4 342 aa7.27□□□□□ -1.25
Upk3b-201ENSMUST00000062606 SycnQ8VCK7 134 aa7.27□□□□□ -1.25
Upk3b-201ENSMUST00000062606 Ndufaf8A2AMZ4 74 aa7.27□□□□□ -1.25
Upk3b-201ENSMUST00000062606 ApobE9Q414 4505 aa7.25□□□□□ -1.25
Upk3b-201ENSMUST00000062606 Gm2310J3QNJ2 377 aa7.24□□□□□ -1.25
Upk3b-201ENSMUST00000062606 Gm27235Q3UW50 83 aa7.22□□□□□ -1.25
Upk3b-201ENSMUST00000062606 Ryr1E9PZQ0 5035 aa7.21□□□□□ -1.26
Upk3b-201ENSMUST00000062606 Fat1A0A1L1SQU7 4645 aa7.21□□□□□ -1.26
Upk3b-201ENSMUST00000062606 Ryr3A2AGL3 4863 aa7.2□□□□□ -1.26
Upk3b-201ENSMUST00000062606 Gpr15lA0A0B4J1N3 78 aa7.19□□□□□ -1.26
Upk3b-201ENSMUST00000062606 CriptO70333 101 aa7.19□□□□□ -1.26
Upk3b-201ENSMUST00000062606 SacsQ9JLC8 4582 aa7.18□□□□□ -1.26
Upk3b-201ENSMUST00000062606 1600014C23RikQ9DAX4 101 aa7.15□□□□□ -1.27
Upk3b-201ENSMUST00000062606 Vps13bQ80TY5 3993 aa7.14□□□□□ -1.27
Upk3b-201ENSMUST00000062606 Gm21798J3QNU5 87 aa7.14□□□□□ -1.27
Upk3b-201ENSMUST00000062606 Krtap10-4Q08EG8 221 aa7.13□□□□□ -1.27
Upk3b-201ENSMUST00000062606 Gm10139O88245 57 aa7.11□□□□□ -1.27
Upk3b-201ENSMUST00000062606 Tnp2P11378 117 aa7.08□□□□□ -1.28
Upk3b-201ENSMUST00000062606 Gm10642Q3TWM1 71 aa7.08□□□□□ -1.28
Upk3b-201ENSMUST00000062606 Dnah8Q91XQ0 4731 aa7.07□□□□□ -1.28
Upk3b-201ENSMUST00000062606 Krtap14O08640 167 aa7.07□□□□□ -1.28
Upk3b-201ENSMUST00000062606 Sec61bQ9CQS8 96 aaKnown RBP7.06□□□□□ -1.28
Upk3b-201ENSMUST00000062606 Adm2Q7TNK8 150 aa7.06□□□□□ -1.28
Upk3b-201ENSMUST00000062606 NbdyA0A0N4SUI7 68 aa7.06□□□□□ -1.28
Upk3b-201ENSMUST00000062606 Krtap3-2Q9D638 99 aa7.05□□□□□ -1.28
Upk3b-201ENSMUST00000062606 Krtap3-3Q9D7P0 99 aa7.05□□□□□ -1.28
Upk3b-201ENSMUST00000062606 Gm3880A0A1B0GSB3 72 aa7.04□□□□□ -1.28
Upk3b-201ENSMUST00000062606 Q8K1L6 76 aa7.04□□□□□ -1.28
Upk3b-201ENSMUST00000062606 Stard9Q80TF6 4561 aa7.02□□□□□ -1.29
Upk3b-201ENSMUST00000062606 Hectd4E9Q2E4 4418 aa7.02□□□□□ -1.29
Upk3b-201ENSMUST00000062606 Gm2696A0A1W2P709 240 aa7.01□□□□□ -1.29
Upk3b-201ENSMUST00000062606 Krtap13O88375 197 aa7.01□□□□□ -1.29
Upk3b-201ENSMUST00000062606 Anapc11Q9CPX9 84 aa7□□□□□ -1.29
Upk3b-201ENSMUST00000062606 Rnase13Q5GAM7 153 aa7□□□□□ -1.29
Upk3b-201ENSMUST00000062606 Fat2Q5F226 4351 aa6.99□□□□□ -1.29
Upk3b-201ENSMUST00000062606 Gm9112A2AI92 75 aa6.97□□□□□ -1.29
Upk3b-201ENSMUST00000062606 Dnhd1D3Z2X2 4750 aa6.96□□□□□ -1.3
Upk3b-201ENSMUST00000062606 Kmt2cQ8BRH4 4903 aa6.96□□□□□ -1.3
Upk3b-201ENSMUST00000062606 Defb1P56386 69 aa6.93□□□□□ -1.3
Upk3b-201ENSMUST00000062606 RetnlbQ99P86 105 aa6.9□□□□□ -1.31
Upk3b-201ENSMUST00000062606 Birc6O88738 4882 aa6.88□□□□□ -1.31
Upk3b-201ENSMUST00000062606 Defb39Q70KL3 74 aa6.87□□□□□ -1.31
Upk3b-201ENSMUST00000062606 Lrp1bQ9JI18 4599 aa6.86□□□□□ -1.31
Upk3b-201ENSMUST00000062606 2210017I01RikA0A0A6YVV1 95 aa6.83□□□□□ -1.32
Upk3b-201ENSMUST00000062606 Krtap19-5O08632 62 aa6.83□□□□□ -1.32
Upk3b-201ENSMUST00000062606 Defb13Q8R2I4 64 aa6.83□□□□□ -1.32
Upk3b-201ENSMUST00000062606 Gm20537G3UYK7 97 aa6.81□□□□□ -1.32
Upk3b-201ENSMUST00000062606 2310057N15RikQ9D6T8 200 aa6.8□□□□□ -1.32
Upk3b-201ENSMUST00000062606 Spaca4Q80ZQ0 127 aa6.79□□□□□ -1.32
Upk3b-201ENSMUST00000062606 Gm10999F6Q4M4 69 aa6.78□□□□□ -1.32
Upk3b-201ENSMUST00000062606 Fat3Q8BNA6 4555 aa6.78□□□□□ -1.32
Upk3b-201ENSMUST00000062606 Gm16253D3Z167 63 aa6.77□□□□□ -1.33
Upk3b-201ENSMUST00000062606 D6Ertd527eA0A0N4SWI3 464 aa6.75□□□□□ -1.33
Upk3b-201ENSMUST00000062606 Rps29P62274 56 aa6.7□□□□□ -1.34
Upk3b-201ENSMUST00000062606 Gm5965D3Z724 196 aa6.7□□□□□ -1.34
Upk3b-201ENSMUST00000062606 Gm4491E0CX42 125 aa6.7□□□□□ -1.34
Upk3b-201ENSMUST00000062606 Herc2Q4U2R1 4836 aa6.68□□□□□ -1.34
Upk3b-201ENSMUST00000062606 Krtap15-1Q9QZU5 150 aa6.66□□□□□ -1.34
Upk3b-201ENSMUST00000062606 2310079G19RikQ9D6L6 185 aa6.63□□□□□ -1.35
Upk3b-201ENSMUST00000062606 Lce1mQ9CR91 182 aa6.62□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 87.2 ms