RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 AW011738F6S7Q2 159 aa5.94□□□□□ -1.46
Pcdh1-201ENSMUST00000057185 Sec61gP60060 68 aa5.9□□□□□ -1.46
Pcdh1-201ENSMUST00000057185 Krtap10-4Q08EG8 221 aa5.89□□□□□ -1.47
Pcdh1-201ENSMUST00000057185 Cypt15B1AXS0 87 aa5.88□□□□□ -1.47
Pcdh1-201ENSMUST00000057185 Dnah10D3YYQ8 4591 aa5.88□□□□□ -1.47
Pcdh1-201ENSMUST00000057185 Q8BGJ3 129 aa5.88□□□□□ -1.47
Pcdh1-201ENSMUST00000057185 Gm10065F6TJM2 114 aa5.86□□□□□ -1.47
Pcdh1-201ENSMUST00000057185 Gm21798J3QNU5 87 aa5.86□□□□□ -1.47
Pcdh1-201ENSMUST00000057185 Dnah14A0A140LIJ4 4489 aa5.86□□□□□ -1.47
Pcdh1-201ENSMUST00000057185 Cypt14J3QPF7 87 aa5.85□□□□□ -1.47
Pcdh1-201ENSMUST00000057185 NbdyA0A0N4SUI7 68 aa5.84□□□□□ -1.47
Pcdh1-201ENSMUST00000057185 Gm2310J3QNJ2 377 aa5.83□□□□□ -1.48
Pcdh1-201ENSMUST00000057185 Krtap13O88375 197 aa5.83□□□□□ -1.48
Pcdh1-201ENSMUST00000057185 OxtP35454 125 aa5.81□□□□□ -1.48
Pcdh1-201ENSMUST00000057185 Limd2Q8BGB5 128 aa5.8□□□□□ -1.48
Pcdh1-201ENSMUST00000057185 4933415A04RikQ9D443 101 aa5.8□□□□□ -1.48
Pcdh1-201ENSMUST00000057185 RetnlbQ99P86 105 aa5.8□□□□□ -1.48
Pcdh1-201ENSMUST00000057185 2310050C09RikG5E8Z3 280 aa5.79□□□□□ -1.48
Pcdh1-201ENSMUST00000057185 Dnah7bL7N1Y0 4068 aa5.78□□□□□ -1.48
Pcdh1-201ENSMUST00000057185 Gm16253D3Z167 63 aa5.78□□□□□ -1.48
Pcdh1-201ENSMUST00000057185 2310034C09RikQ9D746 214 aa5.76□□□□□ -1.49
Pcdh1-201ENSMUST00000057185 Csmd3Q80T79 3707 aa5.76□□□□□ -1.49
Pcdh1-201ENSMUST00000057185 Krtap29-1A2A5X4 342 aa5.76□□□□□ -1.49
Pcdh1-201ENSMUST00000057185 Uqcr11Q9CPX8 56 aa5.75□□□□□ -1.49
Pcdh1-201ENSMUST00000057185 Krtap10-10A0A1W2P7T6 217 aa5.74□□□□□ -1.49
Pcdh1-201ENSMUST00000057185 Krtap14O08640 167 aa5.74□□□□□ -1.49
Pcdh1-201ENSMUST00000057185 Gm3646F6S692 53 aa5.73□□□□□ -1.49
Pcdh1-201ENSMUST00000057185 TnxbO35452 4006 aa5.69□□□□□ -1.5
Pcdh1-201ENSMUST00000057185 4930507D05RikQ8C9C9 103 aa5.68□□□□□ -1.5
Pcdh1-201ENSMUST00000057185 Gm10643Q3URG9 111 aa5.66□□□□□ -1.5
Pcdh1-201ENSMUST00000057185 Gm2696A0A1W2P709 240 aa5.65□□□□□ -1.5
Pcdh1-201ENSMUST00000057185 Gm26620Q9CY65 116 aa5.63□□□□□ -1.51
Pcdh1-201ENSMUST00000057185 Gm9918Q8BUR5 174 aa5.62□□□□□ -1.51
Pcdh1-201ENSMUST00000057185 Kmt2aP55200 3966 aa5.61□□□□□ -1.51
Pcdh1-201ENSMUST00000057185 Tnp2P11378 117 aa5.61□□□□□ -1.51
Pcdh1-201ENSMUST00000057185 1700042G07RikB1AUF7 90 aa5.6□□□□□ -1.51
Pcdh1-201ENSMUST00000057185 Huwe1Q7TMY8 4377 aaKnown RBP5.58□□□□□ -1.52
Pcdh1-201ENSMUST00000057185 Dnah17Q69Z23 4481 aa5.58□□□□□ -1.52
Pcdh1-201ENSMUST00000057185 Dnah3Q8BW94 4083 aa5.58□□□□□ -1.52
Pcdh1-201ENSMUST00000057185 Dnah6E9Q0B6 4144 aa5.57□□□□□ -1.52
Pcdh1-201ENSMUST00000057185 Gm4491E0CX42 125 aa5.56□□□□□ -1.52
Pcdh1-201ENSMUST00000057185 Dnah11E9Q7N9 4488 aa5.53□□□□□ -1.52
Pcdh1-201ENSMUST00000057185 Gm9821Q8K076 103 aa5.52□□□□□ -1.53
Pcdh1-201ENSMUST00000057185 Gm3880A0A1B0GSB3 72 aa5.52□□□□□ -1.53
Pcdh1-201ENSMUST00000057185 Gm17606F6ZL36 78 aa5.48□□□□□ -1.53
Pcdh1-201ENSMUST00000057185 Dnah9B1AR51 4484 aa5.46□□□□□ -1.54
Pcdh1-201ENSMUST00000057185 PlecQ9QXS1 4691 aaKnown RBP5.46□□□□□ -1.54
Pcdh1-201ENSMUST00000057185 PrkdcP97313 4128 aa5.45□□□□□ -1.54
Pcdh1-201ENSMUST00000057185 Dnah5Q8VHE6 4621 aa5.44□□□□□ -1.54
Pcdh1-201ENSMUST00000057185 CriptO70333 101 aa5.44□□□□□ -1.54
Pcdh1-201ENSMUST00000057185 Gm12216A0A1W2P827 62 aa5.4□□□□□ -1.55
Pcdh1-201ENSMUST00000057185 Rnase13Q5GAM7 153 aa5.39□□□□□ -1.55
Pcdh1-201ENSMUST00000057185 D6Ertd527eA0A0N4SWI3 464 aa5.39□□□□□ -1.55
Pcdh1-201ENSMUST00000057185 Dnah1E9Q8T7 4250 aa5.38□□□□□ -1.55
Pcdh1-201ENSMUST00000057185 Fras1Q80T14 4010 aa5.37□□□□□ -1.55
Pcdh1-201ENSMUST00000057185 Krtap15-1Q9QZU5 150 aa5.36□□□□□ -1.55
Pcdh1-201ENSMUST00000057185 2310079G19RikQ9D6L6 185 aa5.34□□□□□ -1.55
Pcdh1-201ENSMUST00000057185 Ryr3A2AGL3 4863 aa5.3□□□□□ -1.56
Pcdh1-201ENSMUST00000057185 Dnah7cA0A087WR13 4024 aa5.29□□□□□ -1.56
Pcdh1-201ENSMUST00000057185 Ryr1E9PZQ0 5035 aa5.28□□□□□ -1.56
Pcdh1-201ENSMUST00000057185 Cox6b2Q80ZN9 88 aa5.28□□□□□ -1.56
Pcdh1-201ENSMUST00000057185 Gm5767A0A0J9YTU8 78 aa5.27□□□□□ -1.57
Pcdh1-201ENSMUST00000057185 Gm9955Q8CEJ8 102 aa5.27□□□□□ -1.57
Pcdh1-201ENSMUST00000057185 Gm10382Q3V0T5 144 aa5.24□□□□□ -1.57
Pcdh1-201ENSMUST00000057185 Lrp1bQ9JI18 4599 aa5.23□□□□□ -1.57
Pcdh1-201ENSMUST00000057185 Dync2h1Q45VK7 4306 aa5.22□□□□□ -1.57
Pcdh1-201ENSMUST00000057185 Vps13dB1ART2 4390 aa5.22□□□□□ -1.57
Pcdh1-201ENSMUST00000057185 Gm20537G3UYK7 97 aa5.22□□□□□ -1.57
Pcdh1-201ENSMUST00000057185 A930033H14RikG5E8X6 103 aa5.22□□□□□ -1.57
Pcdh1-201ENSMUST00000057185 Stard9Q80TF6 4561 aa5.21□□□□□ -1.57
Pcdh1-201ENSMUST00000057185 Dnah7aE9Q0T8 4024 aa5.2□□□□□ -1.58
Pcdh1-201ENSMUST00000057185 Gm5965D3Z724 196 aa5.19□□□□□ -1.58
Pcdh1-201ENSMUST00000057185 Krtap3-2Q9D638 99 aa5.18□□□□□ -1.58
Pcdh1-201ENSMUST00000057185 Krtap3-3Q9D7P0 99 aa5.18□□□□□ -1.58
Pcdh1-201ENSMUST00000057185 Gm9736A0A1W2P7N1 277 aa5.17□□□□□ -1.58
Pcdh1-201ENSMUST00000057185 Pla2g10Q9QXX3 151 aa5.17□□□□□ -1.58
Pcdh1-201ENSMUST00000057185 Rps29P62274 56 aa5.17□□□□□ -1.58
Pcdh1-201ENSMUST00000057185 Rpl37Q9D823 97 aa5.15□□□□□ -1.59
Pcdh1-201ENSMUST00000057185 Hectd4E9Q2E4 4418 aa5.14□□□□□ -1.59
Pcdh1-201ENSMUST00000057185 Gm11939A2A592 99 aa5.14□□□□□ -1.59
Pcdh1-201ENSMUST00000057185 ApobE9Q414 4505 aa5.13□□□□□ -1.59
Pcdh1-201ENSMUST00000057185 Mp68P56379 58 aa5.12□□□□□ -1.59
Pcdh1-201ENSMUST00000057185 Romo1P60603 79 aa5.1□□□□□ -1.59
Pcdh1-201ENSMUST00000057185 Dnah2P0C6F1 4456 aa5.08□□□□□ -1.6
Pcdh1-201ENSMUST00000057185 Ryr2E9Q401 4966 aaKnown RBP5.05□□□□□ -1.6
Pcdh1-201ENSMUST00000057185 Pkd1O08852 4293 aa5.05□□□□□ -1.6
Pcdh1-201ENSMUST00000057185 Krtap19-5O08632 62 aa5.03□□□□□ -1.6
Pcdh1-201ENSMUST00000057185 Lrp1Q91ZX7 4545 aaKnown RBP5.03□□□□□ -1.6
Pcdh1-201ENSMUST00000057185 Fat1A0A1L1SQU7 4645 aa5.01□□□□□ -1.61
Pcdh1-201ENSMUST00000057185 Dync1h1Q9JHU4 4644 aaKnown RBP4.99□□□□□ -1.61
Pcdh1-201ENSMUST00000057185 Spink7Q6IE32 76 aa4.97□□□□□ -1.61
Pcdh1-201ENSMUST00000057185 Herc2Q4U2R1 4836 aa4.96□□□□□ -1.62
Pcdh1-201ENSMUST00000057185 Gm19426M0QWC7 77 aa4.95□□□□□ -1.62
Pcdh1-201ENSMUST00000057185 BC029722A0A0N4SW31 51 aa4.94□□□□□ -1.62
Pcdh1-201ENSMUST00000057185 2310057N15RikQ9D6T8 200 aa4.94□□□□□ -1.62
Pcdh1-201ENSMUST00000057185 Gm20538F6Z9R1 75 aa4.94□□□□□ -1.62
Pcdh1-201ENSMUST00000057185 Vps13bQ80TY5 3993 aa4.94□□□□□ -1.62
Pcdh1-201ENSMUST00000057185 Kiaa1109A2AAE1 5005 aa4.93□□□□□ -1.62
Pcdh1-201ENSMUST00000057185 SacsQ9JLC8 4582 aa4.91□□□□□ -1.62
Pcdh1-201ENSMUST00000057185 Gm21887J3QQ04 176 aa4.9□□□□□ -1.62
Retrieved 100 of 22,080 RNA–protein pairs in 434.7 ms