RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Defb13Q8R2I4 64 aa8.78□□□□□ -1
Ushbp1-201ENSMUST00000049184 Gm10065F6TJM2 114 aa8.77□□□□□ -1.01
Ushbp1-201ENSMUST00000049184 Gm9821Q8K076 103 aa8.75□□□□□ -1.01
Ushbp1-201ENSMUST00000049184 Wfdc17Q5SSJ1 76 aa8.74□□□□□ -1.01
Ushbp1-201ENSMUST00000049184 Dnah9B1AR51 4484 aa8.74□□□□□ -1.01
Ushbp1-201ENSMUST00000049184 FasnP19096 2504 aaKnown RBP8.73□□□□□ -1.01
Ushbp1-201ENSMUST00000049184 Krtap29-1A2A5X4 342 aa8.73□□□□□ -1.01
Ushbp1-201ENSMUST00000049184 OxtP35454 125 aa8.73□□□□□ -1.01
Ushbp1-201ENSMUST00000049184 Defb10Q8R2I8 73 aa8.72□□□□□ -1.01
Ushbp1-201ENSMUST00000049184 Gm4707V9GXN5 68 aa8.72□□□□□ -1.01
Ushbp1-201ENSMUST00000049184 Adm2Q7TNK8 150 aa8.71□□□□□ -1.02
Ushbp1-201ENSMUST00000049184 Dnah6E9Q0B6 4144 aa8.7□□□□□ -1.02
Ushbp1-201ENSMUST00000049184 NbdyA0A0N4SUI7 68 aa8.68□□□□□ -1.02
Ushbp1-201ENSMUST00000049184 Cypt15B1AXS0 87 aa8.65□□□□□ -1.02
Ushbp1-201ENSMUST00000049184 Gm10999F6Q4M4 69 aa8.65□□□□□ -1.02
Ushbp1-201ENSMUST00000049184 Defb39Q70KL3 74 aa8.65□□□□□ -1.02
Ushbp1-201ENSMUST00000049184 Q8BGJ3 129 aa8.58□□□□□ -1.04
Ushbp1-201ENSMUST00000049184 Igsf10Q3V1M1 2594 aa8.58□□□□□ -1.04
Ushbp1-201ENSMUST00000049184 Dync2h1Q45VK7 4306 aa8.57□□□□□ -1.04
Ushbp1-201ENSMUST00000049184 2310034C09RikQ9D746 214 aa8.57□□□□□ -1.04
Ushbp1-201ENSMUST00000049184 1600014C23RikQ9DAX4 101 aa8.55□□□□□ -1.04
Ushbp1-201ENSMUST00000049184 Tnp2P11378 117 aa8.55□□□□□ -1.04
Ushbp1-201ENSMUST00000049184 Defb1P56386 69 aa8.54□□□□□ -1.04
Ushbp1-201ENSMUST00000049184 Wfdc3Q14AE4 130 aa8.54□□□□□ -1.04
Ushbp1-201ENSMUST00000049184 Spaca4Q80ZQ0 127 aa8.53□□□□□ -1.04
Ushbp1-201ENSMUST00000049184 Stab2Q8R4U0 2559 aa8.53□□□□□ -1.04
Ushbp1-201ENSMUST00000049184 Krtap14O08640 167 aa8.51□□□□□ -1.05
Ushbp1-201ENSMUST00000049184 Muc6Q80T03 2850 aa8.51□□□□□ -1.05
Ushbp1-201ENSMUST00000049184 Gm17349F7BGH6 99 aa8.5□□□□□ -1.05
Ushbp1-201ENSMUST00000049184 Huwe1Q7TMY8 4377 aaKnown RBP8.49□□□□□ -1.05
Ushbp1-201ENSMUST00000049184 2310079G19RikQ9D6L6 185 aa8.49□□□□□ -1.05
Ushbp1-201ENSMUST00000049184 2310050C09RikG5E8Z3 280 aa8.49□□□□□ -1.05
Ushbp1-201ENSMUST00000049184 Gpr15lA0A0B4J1N3 78 aa8.48□□□□□ -1.05
Ushbp1-201ENSMUST00000049184 Pla2g10Q9QXX3 151 aa8.46□□□□□ -1.05
Ushbp1-201ENSMUST00000049184 Pkd1l1Q8R526 2615 aa8.44□□□□□ -1.06
Ushbp1-201ENSMUST00000049184 Gm9507D3Z5T3 223 aa8.41□□□□□ -1.06
Ushbp1-201ENSMUST00000049184 Krtap13O88375 197 aa8.39□□□□□ -1.07
Ushbp1-201ENSMUST00000049184 Gm12216A0A1W2P827 62 aa8.38□□□□□ -1.07
Ushbp1-201ENSMUST00000049184 Hectd4E9Q2E4 4418 aa8.36□□□□□ -1.07
Ushbp1-201ENSMUST00000049184 4930507D05RikQ8C9C9 103 aa8.36□□□□□ -1.07
Ushbp1-201ENSMUST00000049184 Fras1Q80T14 4010 aa8.36□□□□□ -1.07
Ushbp1-201ENSMUST00000049184 TnxbO35452 4006 aa8.34□□□□□ -1.07
Ushbp1-201ENSMUST00000049184 Krtap3-2Q9D638 99 aa8.33□□□□□ -1.08
Ushbp1-201ENSMUST00000049184 Krtap3-3Q9D7P0 99 aa8.33□□□□□ -1.08
Ushbp1-201ENSMUST00000049184 A930033H14RikG5E8X6 103 aa8.32□□□□□ -1.08
Ushbp1-201ENSMUST00000049184 Dnah5Q8VHE6 4621 aa8.31□□□□□ -1.08
Ushbp1-201ENSMUST00000049184 D6Ertd527eA0A0N4SWI3 464 aa8.3□□□□□ -1.08
Ushbp1-201ENSMUST00000049184 Gm9918Q8BUR5 174 aa8.3□□□□□ -1.08
Ushbp1-201ENSMUST00000049184 PlecQ9QXS1 4691 aaKnown RBP8.28□□□□□ -1.08
Ushbp1-201ENSMUST00000049184 Dnah7cA0A087WR13 4024 aa8.27□□□□□ -1.09
Ushbp1-201ENSMUST00000049184 PrkdcP97313 4128 aa8.25□□□□□ -1.09
Ushbp1-201ENSMUST00000049184 FcgbpE9Q0B5 2583 aa8.24□□□□□ -1.09
Ushbp1-201ENSMUST00000049184 Dnah2P0C6F1 4456 aa8.24□□□□□ -1.09
Ushbp1-201ENSMUST00000049184 Gm4491E0CX42 125 aa8.22□□□□□ -1.09
Ushbp1-201ENSMUST00000049184 Vps13dB1ART2 4390 aa8.2□□□□□ -1.1
Ushbp1-201ENSMUST00000049184 Krtap10-4Q08EG8 221 aa8.19□□□□□ -1.1
Ushbp1-201ENSMUST00000049184 Stard9Q80TF6 4561 aa8.18□□□□□ -1.1
Ushbp1-201ENSMUST00000049184 Gm20537G3UYK7 97 aa8.18□□□□□ -1.1
Ushbp1-201ENSMUST00000049184 Gm3880A0A1B0GSB3 72 aa8.17□□□□□ -1.1
Ushbp1-201ENSMUST00000049184 Defb11Q8R2I7 77 aa8.17□□□□□ -1.1
Ushbp1-201ENSMUST00000049184 Ly6g6cQ9Z1Q4 126 aa8.15□□□□□ -1.1
Ushbp1-201ENSMUST00000049184 Dnah7aE9Q0T8 4024 aa8.15□□□□□ -1.11
Ushbp1-201ENSMUST00000049184 Lrp1bQ9JI18 4599 aa8.08□□□□□ -1.12
Ushbp1-201ENSMUST00000049184 Pkd1O08852 4293 aa8.07□□□□□ -1.12
Ushbp1-201ENSMUST00000049184 ApobE9Q414 4505 aa8.05□□□□□ -1.12
Ushbp1-201ENSMUST00000049184 Cox6b2Q80ZN9 88 aa8.05□□□□□ -1.12
Ushbp1-201ENSMUST00000049184 Romo1P60603 79 aa7.98□□□□□ -1.13
Ushbp1-201ENSMUST00000049184 Gm11939A2A592 99 aa7.97□□□□□ -1.13
Ushbp1-201ENSMUST00000049184 Gm20538F6Z9R1 75 aa7.95□□□□□ -1.14
Ushbp1-201ENSMUST00000049184 Mp68P56379 58 aa7.95□□□□□ -1.14
Ushbp1-201ENSMUST00000049184 Krtap10-10A0A1W2P7T6 217 aa7.94□□□□□ -1.14
Ushbp1-201ENSMUST00000049184 CriptO70333 101 aa7.94□□□□□ -1.14
Ushbp1-201ENSMUST00000049184 Pkhd1E9PZ36 4059 aa7.93□□□□□ -1.14
Ushbp1-201ENSMUST00000049184 Rps29P62274 56 aa7.93□□□□□ -1.14
Ushbp1-201ENSMUST00000049184 Gm9955Q8CEJ8 102 aa7.9□□□□□ -1.15
Ushbp1-201ENSMUST00000049184 Gm2696A0A1W2P709 240 aa7.86□□□□□ -1.15
Ushbp1-201ENSMUST00000049184 SacsQ9JLC8 4582 aa7.85□□□□□ -1.15
Ushbp1-201ENSMUST00000049184 Gm10382Q3V0T5 144 aa7.78□□□□□ -1.16
Ushbp1-201ENSMUST00000049184 Fat2Q5F226 4351 aa7.78□□□□□ -1.16
Ushbp1-201ENSMUST00000049184 RetnlbQ99P86 105 aa7.78□□□□□ -1.16
Ushbp1-201ENSMUST00000049184 Gm17606F6ZL36 78 aa7.74□□□□□ -1.17
Ushbp1-201ENSMUST00000049184 Rpl37Q9D823 97 aa7.73□□□□□ -1.17
Ushbp1-201ENSMUST00000049184 Gm5767A0A0J9YTU8 78 aa7.68□□□□□ -1.18
Ushbp1-201ENSMUST00000049184 Vps13bQ80TY5 3993 aa7.65□□□□□ -1.18
Ushbp1-201ENSMUST00000049184 Rnase13Q5GAM7 153 aa7.61□□□□□ -1.19
Ushbp1-201ENSMUST00000049184 Pkhd1l1Q80ZA4 4249 aa7.58□□□□□ -1.2
Ushbp1-201ENSMUST00000049184 Fat1A0A1L1SQU7 4645 aa7.58□□□□□ -1.2
Ushbp1-201ENSMUST00000049184 Gm21887J3QQ04 176 aa7.49□□□□□ -1.21
Ushbp1-201ENSMUST00000049184 Krtap3-1A2A591 98 aa7.48□□□□□ -1.21
Ushbp1-201ENSMUST00000049184 Dync1h1Q9JHU4 4644 aaKnown RBP7.48□□□□□ -1.21
Ushbp1-201ENSMUST00000049184 Lrp1Q91ZX7 4545 aaKnown RBP7.47□□□□□ -1.21
Ushbp1-201ENSMUST00000049184 Krtap15-1Q9QZU5 150 aa7.46□□□□□ -1.22
Ushbp1-201ENSMUST00000049184 Gm17416Q30KP4 66 aa7.39□□□□□ -1.23
Ushbp1-201ENSMUST00000049184 Gm19426M0QWC7 77 aa7.37□□□□□ -1.23
Ushbp1-201ENSMUST00000049184 Gm9736A0A1W2P7N1 277 aa7.36□□□□□ -1.23
Ushbp1-201ENSMUST00000049184 Ndufaf8A2AMZ4 74 aa7.36□□□□□ -1.23
Ushbp1-201ENSMUST00000049184 Gm5965D3Z724 196 aa7.36□□□□□ -1.23
Ushbp1-201ENSMUST00000049184 Ryr3A2AGL3 4863 aa7.34□□□□□ -1.23
Ushbp1-201ENSMUST00000049184 Fat3Q8BNA6 4555 aa7.32□□□□□ -1.24
Ushbp1-201ENSMUST00000049184 B930094E09RikQ8C4T2 136 aa7.32□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 75.9 ms