RNA–Protein interactions for RNA: ENSMUST00000047697.11

Trim17-201, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

TSL 2 BASIC

Gene Trim17, Length 3,664 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-201ENSMUST00000047697 Defb1P56386 69 aa6.21□□□□□ -1.41
Trim17-201ENSMUST00000047697 Limd2Q8BGB5 128 aa6.21□□□□□ -1.41
Trim17-201ENSMUST00000047697 AW011738F6S7Q2 159 aa6.2□□□□□ -1.42
Trim17-201ENSMUST00000047697 Gm10065F6TJM2 114 aa6.2□□□□□ -1.42
Trim17-201ENSMUST00000047697 Cypt14J3QPF7 87 aa6.2□□□□□ -1.42
Trim17-201ENSMUST00000047697 Gm10643Q3URG9 111 aa6.2□□□□□ -1.42
Trim17-201ENSMUST00000047697 Cypt15B1AXS0 87 aa6.19□□□□□ -1.42
Trim17-201ENSMUST00000047697 Gm17349F7BGH6 99 aa6.19□□□□□ -1.42
Trim17-201ENSMUST00000047697 Ly6g6cQ9Z1Q4 126 aa6.18□□□□□ -1.42
Trim17-201ENSMUST00000047697 Gm9507D3Z5T3 223 aa6.17□□□□□ -1.42
Trim17-201ENSMUST00000047697 Q8BGJ3 129 aa6.17□□□□□ -1.42
Trim17-201ENSMUST00000047697 Uqcr11Q9CPX8 56 aa6.17□□□□□ -1.42
Trim17-201ENSMUST00000047697 Dnah7bL7N1Y0 4068 aa6.17□□□□□ -1.42
Trim17-201ENSMUST00000047697 Gm16253D3Z167 63 aa6.17□□□□□ -1.42
Trim17-201ENSMUST00000047697 Gm26620Q9CY65 116 aa6.16□□□□□ -1.42
Trim17-201ENSMUST00000047697 Dnah10D3YYQ8 4591 aa6.16□□□□□ -1.42
Trim17-201ENSMUST00000047697 Gpr15lA0A0B4J1N3 78 aa6.16□□□□□ -1.42
Trim17-201ENSMUST00000047697 NbdyA0A0N4SUI7 68 aa6.16□□□□□ -1.42
Trim17-201ENSMUST00000047697 1700042G07RikB1AUF7 90 aa6.16□□□□□ -1.42
Trim17-201ENSMUST00000047697 Dnah14A0A140LIJ4 4489 aa6.13□□□□□ -1.43
Trim17-201ENSMUST00000047697 Krtap29-1A2A5X4 342 aa6.11□□□□□ -1.43
Trim17-201ENSMUST00000047697 2310034C09RikQ9D746 214 aa6.09□□□□□ -1.43
Trim17-201ENSMUST00000047697 Krtap13O88375 197 aa6.09□□□□□ -1.44
Trim17-201ENSMUST00000047697 Krtap10-4Q08EG8 221 aa6.06□□□□□ -1.44
Trim17-201ENSMUST00000047697 Krtap14O08640 167 aa6.05□□□□□ -1.44
Trim17-201ENSMUST00000047697 OxtP35454 125 aa6.05□□□□□ -1.44
Trim17-201ENSMUST00000047697 2310050C09RikG5E8Z3 280 aa6.02□□□□□ -1.45
Trim17-201ENSMUST00000047697 Gm9821Q8K076 103 aa5.99□□□□□ -1.45
Trim17-201ENSMUST00000047697 Kmt2aP55200 3966 aa5.99□□□□□ -1.45
Trim17-201ENSMUST00000047697 4930507D05RikQ8C9C9 103 aa5.97□□□□□ -1.45
Trim17-201ENSMUST00000047697 Dnah3Q8BW94 4083 aa5.97□□□□□ -1.45
Trim17-201ENSMUST00000047697 Tnp2P11378 117 aa5.97□□□□□ -1.45
Trim17-201ENSMUST00000047697 Dnah11E9Q7N9 4488 aa5.94□□□□□ -1.46
Trim17-201ENSMUST00000047697 Defb11Q8R2I7 77 aa5.93□□□□□ -1.46
Trim17-201ENSMUST00000047697 Dnah17Q69Z23 4481 aa5.93□□□□□ -1.46
Trim17-201ENSMUST00000047697 Krtap10-10A0A1W2P7T6 217 aa5.9□□□□□ -1.47
Trim17-201ENSMUST00000047697 RetnlbQ99P86 105 aa5.89□□□□□ -1.47
Trim17-201ENSMUST00000047697 Dnah9B1AR51 4484 aa5.87□□□□□ -1.47
Trim17-201ENSMUST00000047697 Gm4491E0CX42 125 aa5.86□□□□□ -1.47
Trim17-201ENSMUST00000047697 Gm3880A0A1B0GSB3 72 aa5.83□□□□□ -1.48
Trim17-201ENSMUST00000047697 Dnah6E9Q0B6 4144 aa5.82□□□□□ -1.48
Trim17-201ENSMUST00000047697 Huwe1Q7TMY8 4377 aaKnown RBP5.82□□□□□ -1.48
Trim17-201ENSMUST00000047697 Gm9918Q8BUR5 174 aa5.81□□□□□ -1.48
Trim17-201ENSMUST00000047697 Dnah1E9Q8T7 4250 aa5.81□□□□□ -1.48
Trim17-201ENSMUST00000047697 Gm2696A0A1W2P709 240 aa5.8□□□□□ -1.48
Trim17-201ENSMUST00000047697 2310079G19RikQ9D6L6 185 aa5.79□□□□□ -1.48
Trim17-201ENSMUST00000047697 Dnah5Q8VHE6 4621 aa5.77□□□□□ -1.49
Trim17-201ENSMUST00000047697 D6Ertd527eA0A0N4SWI3 464 aa5.77□□□□□ -1.49
Trim17-201ENSMUST00000047697 Gm12216A0A1W2P827 62 aa5.76□□□□□ -1.49
Trim17-201ENSMUST00000047697 CriptO70333 101 aa5.72□□□□□ -1.49
Trim17-201ENSMUST00000047697 PlecQ9QXS1 4691 aaKnown RBP5.72□□□□□ -1.49
Trim17-201ENSMUST00000047697 PrkdcP97313 4128 aa5.69□□□□□ -1.5
Trim17-201ENSMUST00000047697 Gm17606F6ZL36 78 aa5.68□□□□□ -1.5
Trim17-201ENSMUST00000047697 Pla2g10Q9QXX3 151 aa5.68□□□□□ -1.5
Trim17-201ENSMUST00000047697 A930033H14RikG5E8X6 103 aa5.66□□□□□ -1.5
Trim17-201ENSMUST00000047697 Dnah7cA0A087WR13 4024 aa5.64□□□□□ -1.51
Trim17-201ENSMUST00000047697 Gm20537G3UYK7 97 aa5.63□□□□□ -1.51
Trim17-201ENSMUST00000047697 Krtap3-2Q9D638 99 aa5.63□□□□□ -1.51
Trim17-201ENSMUST00000047697 Krtap3-3Q9D7P0 99 aa5.63□□□□□ -1.51
Trim17-201ENSMUST00000047697 Cox6b2Q80ZN9 88 aa5.63□□□□□ -1.51
Trim17-201ENSMUST00000047697 Rnase13Q5GAM7 153 aa5.59□□□□□ -1.52
Trim17-201ENSMUST00000047697 Stard9Q80TF6 4561 aa5.59□□□□□ -1.52
Trim17-201ENSMUST00000047697 Gm9955Q8CEJ8 102 aa5.58□□□□□ -1.52
Trim17-201ENSMUST00000047697 Lrp1bQ9JI18 4599 aa5.57□□□□□ -1.52
Trim17-201ENSMUST00000047697 Fras1Q80T14 4010 aa5.56□□□□□ -1.52
Trim17-201ENSMUST00000047697 TnxbO35452 4006 aa5.55□□□□□ -1.52
Trim17-201ENSMUST00000047697 Hectd4E9Q2E4 4418 aa5.55□□□□□ -1.52
Trim17-201ENSMUST00000047697 Gm10382Q3V0T5 144 aa5.54□□□□□ -1.52
Trim17-201ENSMUST00000047697 Dync2h1Q45VK7 4306 aa5.52□□□□□ -1.53
Trim17-201ENSMUST00000047697 Gm5767A0A0J9YTU8 78 aa5.52□□□□□ -1.53
Trim17-201ENSMUST00000047697 Krtap15-1Q9QZU5 150 aa5.52□□□□□ -1.53
Trim17-201ENSMUST00000047697 Mp68P56379 58 aa5.52□□□□□ -1.53
Trim17-201ENSMUST00000047697 Rps29P62274 56 aa5.52□□□□□ -1.53
Trim17-201ENSMUST00000047697 Gm11939A2A592 99 aa5.51□□□□□ -1.53
Trim17-201ENSMUST00000047697 Dnah7aE9Q0T8 4024 aa5.5□□□□□ -1.53
Trim17-201ENSMUST00000047697 Gm21887J3QQ04 176 aa5.47□□□□□ -1.53
Trim17-201ENSMUST00000047697 Rpl37Q9D823 97 aa5.46□□□□□ -1.53
Trim17-201ENSMUST00000047697 Romo1P60603 79 aa5.45□□□□□ -1.54
Trim17-201ENSMUST00000047697 Vps13dB1ART2 4390 aa5.45□□□□□ -1.54
Trim17-201ENSMUST00000047697 Prm2P07978 107 aa5.43□□□□□ -1.54
Trim17-201ENSMUST00000047697 Dnah2P0C6F1 4456 aa5.41□□□□□ -1.54
Trim17-201ENSMUST00000047697 Gm20538F6Z9R1 75 aa5.4□□□□□ -1.55
Trim17-201ENSMUST00000047697 ApobE9Q414 4505 aa5.39□□□□□ -1.55
Trim17-201ENSMUST00000047697 Gm5965D3Z724 196 aa5.38□□□□□ -1.55
Trim17-201ENSMUST00000047697 Pkd1O08852 4293 aa5.37□□□□□ -1.55
Trim17-201ENSMUST00000047697 Gm9736A0A1W2P7N1 277 aa5.36□□□□□ -1.55
Trim17-201ENSMUST00000047697 Vps13bQ80TY5 3993 aa5.33□□□□□ -1.56
Trim17-201ENSMUST00000047697 Lrp1Q91ZX7 4545 aaKnown RBP5.27□□□□□ -1.57
Trim17-201ENSMUST00000047697 SacsQ9JLC8 4582 aa5.26□□□□□ -1.57
Trim17-201ENSMUST00000047697 Dync1h1Q9JHU4 4644 aaKnown RBP5.24□□□□□ -1.57
Trim17-201ENSMUST00000047697 Gm19426M0QWC7 77 aa5.24□□□□□ -1.57
Trim17-201ENSMUST00000047697 Fat1A0A1L1SQU7 4645 aa5.22□□□□□ -1.57
Trim17-201ENSMUST00000047697 Ryr3A2AGL3 4863 aa5.21□□□□□ -1.58
Trim17-201ENSMUST00000047697 Fat2Q5F226 4351 aa5.19□□□□□ -1.58
Trim17-201ENSMUST00000047697 Pkhd1E9PZ36 4059 aa5.18□□□□□ -1.58
Trim17-201ENSMUST00000047697 Krtap19-5O08632 62 aa5.18□□□□□ -1.58
Trim17-201ENSMUST00000047697 BC029722A0A0N4SW31 51 aa5.16□□□□□ -1.58
Trim17-201ENSMUST00000047697 Krtap3-1A2A591 98 aa5.13□□□□□ -1.59
Trim17-201ENSMUST00000047697 Gm17416Q30KP4 66 aa5.13□□□□□ -1.59
Trim17-201ENSMUST00000047697 Ndufaf8A2AMZ4 74 aa5.12□□□□□ -1.59
Retrieved 100 of 22,080 RNA–protein pairs in 76.9 ms