RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 Cby1Q9D1C2 127 aa9.69□□□□□ -0.86
Ubp1-206ENSMUST00000216558 Pkd1O08852 4293 aa9.68□□□□□ -0.86
Ubp1-206ENSMUST00000216558 Sfta2E9PXB6 77 aa9.68□□□□□ -0.86
Ubp1-206ENSMUST00000216558 Gm37389A0A0A6YW05 95 aa9.67□□□□□ -0.86
Ubp1-206ENSMUST00000216558 NbdyA0A0N4SUI7 68 aa9.67□□□□□ -0.86
Ubp1-206ENSMUST00000216558 Igkv8-28A0A0G2JE47 121 aa9.66□□□□□ -0.86
Ubp1-206ENSMUST00000216558 Cox6a2P43023 97 aa9.66□□□□□ -0.86
Ubp1-206ENSMUST00000216558 Gm10401E9Q3K6 71 aa9.65□□□□□ -0.86
Ubp1-206ENSMUST00000216558 P06320 134 aa9.65□□□□□ -0.86
Ubp1-206ENSMUST00000216558 Gm10308Q9CVR5 141 aa9.65□□□□□ -0.86
Ubp1-206ENSMUST00000216558 Gm10570F6VB42 170 aa9.64□□□□□ -0.87
Ubp1-206ENSMUST00000216558 Gm27235Q3UW50 83 aa9.64□□□□□ -0.87
Ubp1-206ENSMUST00000216558 Tmem213Q08EA8 116 aa9.64□□□□□ -0.87
Ubp1-206ENSMUST00000216558 1600014C23RikQ9DAX4 101 aa9.64□□□□□ -0.87
Ubp1-206ENSMUST00000216558 Ube2aQ9Z255 152 aa9.64□□□□□ -0.87
Ubp1-206ENSMUST00000216558 Sprr2jO70561 109 aa9.63□□□□□ -0.87
Ubp1-206ENSMUST00000216558 A330070K13RikQ8CA53 115 aa9.63□□□□□ -0.87
Ubp1-206ENSMUST00000216558 Defa28D3Z1V9 94 aa9.61□□□□□ -0.87
Ubp1-206ENSMUST00000216558 Igkv8-21A0A140T8P7 120 aa9.6□□□□□ -0.87
Ubp1-206ENSMUST00000216558 Adm2Q7TNK8 150 aa9.6□□□□□ -0.87
Ubp1-206ENSMUST00000216558 Tnp2P11378 117 aa9.6□□□□□ -0.87
Ubp1-206ENSMUST00000216558 Gm12353A2AGJ4 60 aa9.59□□□□□ -0.87
Ubp1-206ENSMUST00000216558 Gm10642Q3TWM1 71 aa9.59□□□□□ -0.87
Ubp1-206ENSMUST00000216558 Igkv1-110A0A0B4J1I0 119 aa9.58□□□□□ -0.88
Ubp1-206ENSMUST00000216558 Fam19a3Q7TPG6 132 aa9.58□□□□□ -0.88
Ubp1-206ENSMUST00000216558 ApobE9Q414 4505 aa9.57□□□□□ -0.88
Ubp1-206ENSMUST00000216558 Igkv3-7A0A0G2JE31 119 aa9.57□□□□□ -0.88
Ubp1-206ENSMUST00000216558 Gm28374F6SG70 93 aa9.57□□□□□ -0.88
Ubp1-206ENSMUST00000216558 Wfdc13Q5DQQ6 81 aa9.57□□□□□ -0.88
Ubp1-206ENSMUST00000216558 Ubl5Q9EPV8 73 aa9.56□□□□□ -0.88
Ubp1-206ENSMUST00000216558 Atp5eP56382 52 aa9.56□□□□□ -0.88
Ubp1-206ENSMUST00000216558 4930535I16RikQ9CUI2 172 aa9.55□□□□□ -0.88
Ubp1-206ENSMUST00000216558 Krtap13O88375 197 aa9.54□□□□□ -0.88
Ubp1-206ENSMUST00000216558 Tmem254aP0DN89 123 aa9.54□□□□□ -0.88
Ubp1-206ENSMUST00000216558 Tmem254bP0DN90 123 aa9.54□□□□□ -0.88
Ubp1-206ENSMUST00000216558 Tmem254cP0DN91 123 aa9.54□□□□□ -0.88
Ubp1-206ENSMUST00000216558 Wfdc3Q14AE4 130 aa9.54□□□□□ -0.88
Ubp1-206ENSMUST00000216558 HrnrQ8VHD8 2496 aa9.53□□□□□ -0.88
Ubp1-206ENSMUST00000216558 Odf3bQ5M8M2 238 aa9.53□□□□□ -0.88
Ubp1-206ENSMUST00000216558 Krtap14O08640 167 aa9.53□□□□□ -0.88
Ubp1-206ENSMUST00000216558 Chchd10Q7TNL9 138 aa9.53□□□□□ -0.88
Ubp1-206ENSMUST00000216558 Igkv3-5A0A140T8M6 119 aa9.52□□□□□ -0.89
Ubp1-206ENSMUST00000216558 D130052B06RikQ3UW13 202 aa9.52□□□□□ -0.89
Ubp1-206ENSMUST00000216558 Dync1h1Q9JHU4 4644 aaKnown RBP9.51□□□□□ -0.89
Ubp1-206ENSMUST00000216558 1700018G05RikA0A1B0GSI2 66 aa9.49□□□□□ -0.89
Ubp1-206ENSMUST00000216558 Gm2696A0A1W2P709 240 aa9.49□□□□□ -0.89
Ubp1-206ENSMUST00000216558 Ccdc179J3QM76 67 aa9.49□□□□□ -0.89
Ubp1-206ENSMUST00000216558 Q8BT88 171 aa9.49□□□□□ -0.89
Ubp1-206ENSMUST00000216558 Gm37013Q8K491 104 aa9.49□□□□□ -0.89
Ubp1-206ENSMUST00000216558 Gm20726G3UX18 150 aa9.48□□□□□ -0.89
Ubp1-206ENSMUST00000216558 Defb39Q70KL3 74 aa9.48□□□□□ -0.89
Ubp1-206ENSMUST00000216558 Anapc13Q8R034 74 aa9.48□□□□□ -0.89
Ubp1-206ENSMUST00000216558 MplkipQ9D011 178 aa9.48□□□□□ -0.89
Ubp1-206ENSMUST00000216558 Igkv3-4A0A140T8Q4 119 aa9.47□□□□□ -0.89
Ubp1-206ENSMUST00000216558 Znf706Q9D115 76 aaKnown RBP9.47□□□□□ -0.89
Ubp1-206ENSMUST00000216558 Krtap10-10A0A1W2P7T6 217 aa9.46□□□□□ -0.89
Ubp1-206ENSMUST00000216558 Fat1A0A1L1SQU7 4645 aa9.46□□□□□ -0.89
Ubp1-206ENSMUST00000216558 ScxQ64124 207 aa9.45□□□□□ -0.9
Ubp1-206ENSMUST00000216558 Pkhd1E9PZ36 4059 aa9.45□□□□□ -0.9
Ubp1-206ENSMUST00000216558 Ryr3A2AGL3 4863 aa9.45□□□□□ -0.9
Ubp1-206ENSMUST00000216558 Hectd4E9Q2E4 4418 aa9.44□□□□□ -0.9
Ubp1-206ENSMUST00000216558 Gm28230A0A0A0MQ91 144 aa9.43□□□□□ -0.9
Ubp1-206ENSMUST00000216558 Mrpl34Q99N91 92 aa9.43□□□□□ -0.9
Ubp1-206ENSMUST00000216558 Gm17689B3GLJ4 109 aa9.42□□□□□ -0.9
Ubp1-206ENSMUST00000216558 Gm44790A0A0N4SV91 103 aa9.42□□□□□ -0.9
Ubp1-206ENSMUST00000216558 Igf1P05017 153 aa9.42□□□□□ -0.9
Ubp1-206ENSMUST00000216558 C130032M10RikQ8C888 123 aa9.42□□□□□ -0.9
Ubp1-206ENSMUST00000216558 Igkv3-10A0A0G2JGN0 119 aa9.41□□□□□ -0.9
Ubp1-206ENSMUST00000216558 Stard9Q80TF6 4561 aa9.4□□□□□ -0.9
Ubp1-206ENSMUST00000216558 Cypt14J3QPF7 87 aa9.4□□□□□ -0.9
Ubp1-206ENSMUST00000216558 Rpl37aP61514 92 aa9.39□□□□□ -0.91
Ubp1-206ENSMUST00000216558 Hist1h4aP62806 103 aaKnown RBP9.39□□□□□ -0.91
Ubp1-206ENSMUST00000216558 UqcrqQ9CQ69 82 aa9.39□□□□□ -0.91
Ubp1-206ENSMUST00000216558 Bean1Q9EQG5 255 aa9.38□□□□□ -0.91
Ubp1-206ENSMUST00000216558 Lrp1bQ9JI18 4599 aa9.37□□□□□ -0.91
Ubp1-206ENSMUST00000216558 Ryr2E9Q401 4966 aaKnown RBP9.36□□□□□ -0.91
Ubp1-206ENSMUST00000216558 Gm21886J3QJU9 214 aa9.34□□□□□ -0.91
Ubp1-206ENSMUST00000216558 Gm20604F8WIA3 75 aa9.34□□□□□ -0.91
Ubp1-206ENSMUST00000216558 Cystm1Q8K353 104 aa9.34□□□□□ -0.91
Ubp1-206ENSMUST00000216558 Anapc11Q9CPX9 84 aa9.33□□□□□ -0.92
Ubp1-206ENSMUST00000216558 Krtap4-1Q3UUY3 169 aa9.28□□□□□ -0.92
Ubp1-206ENSMUST00000216558 Defa25Q5G864 92 aa9.27□□□□□ -0.92
Ubp1-206ENSMUST00000216558 Igkv8-19A0A0G2JFN8 121 aa9.27□□□□□ -0.93
Ubp1-206ENSMUST00000216558 Ndufc1Q9CQY9 76 aa9.26□□□□□ -0.93
Ubp1-206ENSMUST00000216558 Gm16253D3Z167 63 aa9.24□□□□□ -0.93
Ubp1-206ENSMUST00000216558 Fat2Q5F226 4351 aa9.24□□□□□ -0.93
Ubp1-206ENSMUST00000216558 7530416G11RikJ3QJX6 159 aa9.23□□□□□ -0.93
Ubp1-206ENSMUST00000216558 Fam229bQ8CF36 80 aa9.23□□□□□ -0.93
Ubp1-206ENSMUST00000216558 Pkhd1l1Q80ZA4 4249 aa9.21□□□□□ -0.93
Ubp1-206ENSMUST00000216558 Reg3aO09037 175 aa9.21□□□□□ -0.93
Ubp1-206ENSMUST00000216558 Prr15lQ8JZM2 100 aa9.2□□□□□ -0.94
Ubp1-206ENSMUST00000216558 SacsQ9JLC8 4582 aa9.2□□□□□ -0.94
Ubp1-206ENSMUST00000216558 Mrpl55Q9CZ83 127 aa9.2□□□□□ -0.94
Ubp1-206ENSMUST00000216558 4930518I15RikQ3V2W7 57 aa9.18□□□□□ -0.94
Ubp1-206ENSMUST00000216558 Serp2Q6TAW2 65 aa9.17□□□□□ -0.94
Ubp1-206ENSMUST00000216558 Vps13bQ80TY5 3993 aa9.13□□□□□ -0.95
Ubp1-206ENSMUST00000216558 Naa38Q9D2U5 125 aa9.13□□□□□ -0.95
Ubp1-206ENSMUST00000216558 Gm2310J3QNJ2 377 aa9.12□□□□□ -0.95
Ubp1-206ENSMUST00000216558 Prr13Q9CQJ5 137 aa9.12□□□□□ -0.95
Ubp1-206ENSMUST00000216558 Ryr1E9PZQ0 5035 aa9.1□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 95.6 ms