RNA–Protein interactions for RNA: ENSMUST00000200169.5

Chd8-212, Transcript of Chromodomain-helicase-DNA-binding protein 8, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Chd8, Length 8,509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8-212ENSMUST00000200169 SrcapA0A087WQ44 3271 aa5.53□□□□□ -1.52
Chd8-212ENSMUST00000200169 NbdyA0A0N4SUI7 68 aa5.53□□□□□ -1.52
Chd8-212ENSMUST00000200169 Gm10065F6TJM2 114 aa5.52□□□□□ -1.53
Chd8-212ENSMUST00000200169 NipblQ6KCD5 2798 aaKnown RBP5.5□□□□□ -1.53
Chd8-212ENSMUST00000200169 Plac8Q9JI48 112 aa5.5□□□□□ -1.53
Chd8-212ENSMUST00000200169 Itpr3P70227 2670 aa5.48□□□□□ -1.53
Chd8-212ENSMUST00000200169 C530025M09RikF6RGA8 229 aa5.46□□□□□ -1.54
Chd8-212ENSMUST00000200169 Chd6A3KFM7 2711 aa5.45□□□□□ -1.54
Chd8-212ENSMUST00000200169 Itpr2Q9Z329 2701 aa5.44□□□□□ -1.54
Chd8-212ENSMUST00000200169 Gm37013Q8K491 104 aa5.42□□□□□ -1.54
Chd8-212ENSMUST00000200169 Gm5767A0A0J9YTU8 78 aa5.42□□□□□ -1.54
Chd8-212ENSMUST00000200169 Zfp292Q9Z2U2 2698 aa5.4□□□□□ -1.55
Chd8-212ENSMUST00000200169 Usp34Q6ZQ93 3582 aa5.39□□□□□ -1.55
Chd8-212ENSMUST00000200169 Smim29Q8R043 75 aa5.38□□□□□ -1.55
Chd8-212ENSMUST00000200169 2310050C09RikG5E8Z3 280 aa5.37□□□□□ -1.55
Chd8-212ENSMUST00000200169 Cox6b2Q80ZN9 88 aa5.37□□□□□ -1.55
Chd8-212ENSMUST00000200169 Gm3646F6S692 53 aa5.34□□□□□ -1.55
Chd8-212ENSMUST00000200169 Ep400Q8CHI8 3072 aaKnown RBP5.33□□□□□ -1.56
Chd8-212ENSMUST00000200169 Gm42715A0A087WP63 3095 aaKnown RBP5.33□□□□□ -1.56
Chd8-212ENSMUST00000200169 Tnp1P10856 55 aa5.33□□□□□ -1.56
Chd8-212ENSMUST00000200169 Fam229bQ8CF36 80 aa5.32□□□□□ -1.56
Chd8-212ENSMUST00000200169 Col6a5A6H584 2640 aa5.31□□□□□ -1.56
Chd8-212ENSMUST00000200169 FcgbpE9Q0B5 2583 aa5.29□□□□□ -1.56
Chd8-212ENSMUST00000200169 Lama3Q61789 3330 aa5.28□□□□□ -1.56
Chd8-212ENSMUST00000200169 Utp20Q5XG71 2788 aaKnown RBP5.28□□□□□ -1.56
Chd8-212ENSMUST00000200169 ApcQ61315 2845 aa5.28□□□□□ -1.56
Chd8-212ENSMUST00000200169 Gm9112A2AI92 75 aa5.27□□□□□ -1.57
Chd8-212ENSMUST00000200169 Bod1lE9Q6J5 3032 aa5.26□□□□□ -1.57
Chd8-212ENSMUST00000200169 Ash1lQ99MY8 2958 aa5.26□□□□□ -1.57
Chd8-212ENSMUST00000200169 Gm16253D3Z167 63 aa5.25□□□□□ -1.57
Chd8-212ENSMUST00000200169 Gm3250E9Q1M3 230 aa5.25□□□□□ -1.57
Chd8-212ENSMUST00000200169 Gm10139O88245 57 aa5.24□□□□□ -1.57
Chd8-212ENSMUST00000200169 Itpr1P11881 2749 aa5.24□□□□□ -1.57
Chd8-212ENSMUST00000200169 Ubr5Q80TP3 2792 aa5.23□□□□□ -1.57
Chd8-212ENSMUST00000200169 Gm40193A0A1B0GT39 78 aa5.23□□□□□ -1.57
Chd8-212ENSMUST00000200169 Cep350E9Q309 3095 aa5.21□□□□□ -1.57
Chd8-212ENSMUST00000200169 1700042G07RikB1AUF7 90 aa5.21□□□□□ -1.58
Chd8-212ENSMUST00000200169 Gm21887J3QQ04 176 aa5.21□□□□□ -1.58
Chd8-212ENSMUST00000200169 Nbeal2Q6ZQA0 2742 aa5.2□□□□□ -1.58
Chd8-212ENSMUST00000200169 Tex15F8VPN2 2785 aa5.19□□□□□ -1.58
Chd8-212ENSMUST00000200169 Sprr1aQ62266 144 aa5.18□□□□□ -1.58
Chd8-212ENSMUST00000200169 Gm3285A0A1W2P7U0 201 aa5.17□□□□□ -1.58
Chd8-212ENSMUST00000200169 CenpfE9Q3P4 2997 aaKnown RBP5.15□□□□□ -1.59
Chd8-212ENSMUST00000200169 Rps29P62274 56 aa5.14□□□□□ -1.59
Chd8-212ENSMUST00000200169 Lelp1Q9DAE3 120 aa5.14□□□□□ -1.59
Chd8-212ENSMUST00000200169 Krtap29-1A2A5X4 342 aa5.13□□□□□ -1.59
Chd8-212ENSMUST00000200169 Dnah12Q3V0Q1 3086 aa5.13□□□□□ -1.59
Chd8-212ENSMUST00000200169 Tnrc18Q80WC3 2878 aa5.12□□□□□ -1.59
Chd8-212ENSMUST00000200169 KalrnA2CG49 2964 aa5.11□□□□□ -1.59
Chd8-212ENSMUST00000200169 Krtap13O88375 197 aa5.07□□□□□ -1.6
Chd8-212ENSMUST00000200169 Gm2310J3QNJ2 377 aa5.07□□□□□ -1.6
Chd8-212ENSMUST00000200169 TrioQ0KL02 3102 aa5.06□□□□□ -1.6
Chd8-212ENSMUST00000200169 Lama2Q60675 3118 aaKnown RBP5.06□□□□□ -1.6
Chd8-212ENSMUST00000200169 4933415A04RikQ9D443 101 aa5.04□□□□□ -1.6
Chd8-212ENSMUST00000200169 Prune2Q52KR3 3084 aa5.04□□□□□ -1.6
Chd8-212ENSMUST00000200169 Myo15bI7HPW8 3033 aa5.03□□□□□ -1.6
Chd8-212ENSMUST00000200169 Gm17349F7BGH6 99 aa5.02□□□□□ -1.61
Chd8-212ENSMUST00000200169 Zzef1Q5SSH7 2924 aa5.01□□□□□ -1.61
Chd8-212ENSMUST00000200169 Srrm2Q8BTI8 2703 aaKnown RBP5□□□□□ -1.61
Chd8-212ENSMUST00000200169 Cdh23Q99PF4 3354 aa4.99□□□□□ -1.61
Chd8-212ENSMUST00000200169 Chd9Q8BYH8 2885 aa4.99□□□□□ -1.61
Chd8-212ENSMUST00000200169 DspE9Q557 2883 aaKnown RBP4.99□□□□□ -1.61
Chd8-212ENSMUST00000200169 Muc2Q80Z19 2680 aa4.97□□□□□ -1.61
Chd8-212ENSMUST00000200169 BptfA2A654 3036 aaKnown RBP4.96□□□□□ -1.62
Chd8-212ENSMUST00000200169 FlncQ8VHX6 2726 aaKnown RBP4.95□□□□□ -1.62
Chd8-212ENSMUST00000200169 Gm11565A2A4M7 156 aa4.93□□□□□ -1.62
Chd8-212ENSMUST00000200169 A730071L15RikQ8C4X0 137 aa4.93□□□□□ -1.62
Chd8-212ENSMUST00000200169 Tenm1Q9WTS4 2731 aa4.92□□□□□ -1.62
Chd8-212ENSMUST00000200169 Cystm1Q8K353 104 aa4.92□□□□□ -1.62
Chd8-212ENSMUST00000200169 Krtap14O08640 167 aa4.92□□□□□ -1.62
Chd8-212ENSMUST00000200169 Gm3233E9Q2H5 230 aa4.91□□□□□ -1.62
Chd8-212ENSMUST00000200169 Gm7138L7N2C3 230 aa4.88□□□□□ -1.63
Chd8-212ENSMUST00000200169 Gm3238W4VSP7 230 aa4.88□□□□□ -1.63
Chd8-212ENSMUST00000200169 Gm9508A0A1W2P7W0 230 aa4.88□□□□□ -1.63
Chd8-212ENSMUST00000200169 Nf1Q04690 2841 aa4.87□□□□□ -1.63
Chd8-212ENSMUST00000200169 Igfn1Q3KNY0 2849 aa4.86□□□□□ -1.63
Chd8-212ENSMUST00000200169 Hivep1Q03172 2688 aa4.86□□□□□ -1.63
Chd8-212ENSMUST00000200169 MgaA2AWL7 3003 aaKnown RBP4.85□□□□□ -1.63
Chd8-212ENSMUST00000200169 Szt2A2A9C3 3431 aa4.85□□□□□ -1.63
Chd8-212ENSMUST00000200169 Gm7173A0A0G2JEB6 3132 aa4.85□□□□□ -1.63
Chd8-212ENSMUST00000200169 FrylF8VQ05 3007 aa4.85□□□□□ -1.63
Chd8-212ENSMUST00000200169 Lama1P19137 3084 aa4.85□□□□□ -1.63
Chd8-212ENSMUST00000200169 Wdfy4E9Q2M9 3149 aa4.85□□□□□ -1.63
Chd8-212ENSMUST00000200169 Mki67E9PVX6 3177 aaKnown RBP4.85□□□□□ -1.63
Chd8-212ENSMUST00000200169 Dmxl1Q6PNC0 3013 aa4.85□□□□□ -1.63
Chd8-212ENSMUST00000200169 Trank1Q8BV79 2999 aa4.83□□□□□ -1.64
Chd8-212ENSMUST00000200169 HttP42859 3119 aa4.82□□□□□ -1.64
Chd8-212ENSMUST00000200169 Col12a1Q60847 3120 aa4.82□□□□□ -1.64
Chd8-212ENSMUST00000200169 4933428G20RikQ9D3X4 101 aa4.82□□□□□ -1.64
Chd8-212ENSMUST00000200169 Dmxl2Q8BPN8 3032 aa4.81□□□□□ -1.64
Chd8-212ENSMUST00000200169 D6Ertd527eA0A0N4SWI3 464 aa4.81□□□□□ -1.64
Chd8-212ENSMUST00000200169 Gm7137J3QMW1 236 aa4.81□□□□□ -1.64
Chd8-212ENSMUST00000200169 Vps13aQ5H8C4 3166 aa4.81□□□□□ -1.64
Chd8-212ENSMUST00000200169 Ranbp2Q9ERU9 3053 aaKnown RBP4.8□□□□□ -1.64
Chd8-212ENSMUST00000200169 Tnp2P11378 117 aa4.8□□□□□ -1.64
Chd8-212ENSMUST00000200169 Chd7A2AJK6 2986 aaKnown RBP4.79□□□□□ -1.64
Chd8-212ENSMUST00000200169 Rev3lQ61493 3122 aa4.78□□□□□ -1.64
Chd8-212ENSMUST00000200169 LrbaQ9ESE1 2856 aa4.77□□□□□ -1.65
Chd8-212ENSMUST00000200169 FryE9Q8I9 3020 aa4.77□□□□□ -1.65
Chd8-212ENSMUST00000200169 Pdzd2E9Q1M1 2796 aa4.77□□□□□ -1.65
Retrieved 100 of 22,080 RNA–protein pairs in 245 ms