RNA–Protein interactions for RNA: ENSMUST00000175975.8

Cux1-204, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cux1, Length 10,945 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-204ENSMUST00000175975 Utp20Q5XG71 2788 aaKnown RBP7.3□□□□□ -1.24
Cux1-204ENSMUST00000175975 C530025M09RikF6RGA8 229 aa7.29□□□□□ -1.24
Cux1-204ENSMUST00000175975 Itpr1P11881 2749 aa7.29□□□□□ -1.24
Cux1-204ENSMUST00000175975 Anapc11Q9CPX9 84 aa7.28□□□□□ -1.24
Cux1-204ENSMUST00000175975 Rpl37Q9D823 97 aa7.27□□□□□ -1.24
Cux1-204ENSMUST00000175975 Itpr2Q9Z329 2701 aa7.26□□□□□ -1.25
Cux1-204ENSMUST00000175975 BC029722A0A0N4SW31 51 aa7.23□□□□□ -1.25
Cux1-204ENSMUST00000175975 CenpfE9Q3P4 2997 aaKnown RBP7.22□□□□□ -1.25
Cux1-204ENSMUST00000175975 Smim29Q8R043 75 aa7.2□□□□□ -1.26
Cux1-204ENSMUST00000175975 Gm37013Q8K491 104 aa7.2□□□□□ -1.26
Cux1-204ENSMUST00000175975 ApcQ61315 2845 aa7.19□□□□□ -1.26
Cux1-204ENSMUST00000175975 Ep400Q8CHI8 3072 aaKnown RBP7.18□□□□□ -1.26
Cux1-204ENSMUST00000175975 Gm19426M0QWC7 77 aa7.17□□□□□ -1.26
Cux1-204ENSMUST00000175975 Gm42715A0A087WP63 3095 aaKnown RBP7.17□□□□□ -1.26
Cux1-204ENSMUST00000175975 Krtap15-1Q9QZU5 150 aa7.16□□□□□ -1.26
Cux1-204ENSMUST00000175975 Dnah12Q3V0Q1 3086 aa7.12□□□□□ -1.27
Cux1-204ENSMUST00000175975 Gm10382Q3V0T5 144 aa7.12□□□□□ -1.27
Cux1-204ENSMUST00000175975 Ash1lQ99MY8 2958 aa7.12□□□□□ -1.27
Cux1-204ENSMUST00000175975 Tex15F8VPN2 2785 aa7.11□□□□□ -1.27
Cux1-204ENSMUST00000175975 Cox6b2Q80ZN9 88 aa7.11□□□□□ -1.27
Cux1-204ENSMUST00000175975 SrcapA0A087WQ44 3271 aa7.1□□□□□ -1.27
Cux1-204ENSMUST00000175975 Gm5767A0A0J9YTU8 78 aa7.09□□□□□ -1.27
Cux1-204ENSMUST00000175975 Cep350E9Q309 3095 aa7.09□□□□□ -1.27
Cux1-204ENSMUST00000175975 Ubr5Q80TP3 2792 aa7.09□□□□□ -1.27
Cux1-204ENSMUST00000175975 Nbeal2Q6ZQA0 2742 aa7.09□□□□□ -1.27
Cux1-204ENSMUST00000175975 Gm16253D3Z167 63 aa7.08□□□□□ -1.28
Cux1-204ENSMUST00000175975 Gm10139O88245 57 aa7.08□□□□□ -1.28
Cux1-204ENSMUST00000175975 Fam229bQ8CF36 80 aa7.07□□□□□ -1.28
Cux1-204ENSMUST00000175975 Prune2Q52KR3 3084 aa7.07□□□□□ -1.28
Cux1-204ENSMUST00000175975 Gm3646F6S692 53 aa7.05□□□□□ -1.28
Cux1-204ENSMUST00000175975 Ndufaf8A2AMZ4 74 aa7.04□□□□□ -1.28
Cux1-204ENSMUST00000175975 Gm3285A0A1W2P7U0 201 aa7.03□□□□□ -1.28
Cux1-204ENSMUST00000175975 Bod1lE9Q6J5 3032 aa7□□□□□ -1.29
Cux1-204ENSMUST00000175975 Gm11565A2A4M7 156 aa6.98□□□□□ -1.29
Cux1-204ENSMUST00000175975 Rps29P62274 56 aa6.97□□□□□ -1.29
Cux1-204ENSMUST00000175975 DspE9Q557 2883 aaKnown RBP6.95□□□□□ -1.3
Cux1-204ENSMUST00000175975 1700042G07RikB1AUF7 90 aa6.95□□□□□ -1.3
Cux1-204ENSMUST00000175975 Sprr1aQ62266 144 aa6.94□□□□□ -1.3
Cux1-204ENSMUST00000175975 Krtap29-1A2A5X4 342 aa6.92□□□□□ -1.3
Cux1-204ENSMUST00000175975 KalrnA2CG49 2964 aa6.9□□□□□ -1.3
Cux1-204ENSMUST00000175975 Tnrc18Q80WC3 2878 aa6.9□□□□□ -1.3
Cux1-204ENSMUST00000175975 Gm40193A0A1B0GT39 78 aa6.9□□□□□ -1.3
Cux1-204ENSMUST00000175975 2310050C09RikG5E8Z3 280 aa6.9□□□□□ -1.3
Cux1-204ENSMUST00000175975 Gm3250E9Q1M3 230 aa6.89□□□□□ -1.31
Cux1-204ENSMUST00000175975 Zzef1Q5SSH7 2924 aa6.85□□□□□ -1.31
Cux1-204ENSMUST00000175975 Srrm2Q8BTI8 2703 aaKnown RBP6.85□□□□□ -1.31
Cux1-204ENSMUST00000175975 Tnp1P10856 55 aa6.84□□□□□ -1.31
Cux1-204ENSMUST00000175975 FcgbpE9Q0B5 2583 aa6.83□□□□□ -1.32
Cux1-204ENSMUST00000175975 MgaA2AWL7 3003 aaKnown RBP6.83□□□□□ -1.32
Cux1-204ENSMUST00000175975 FrylF8VQ05 3007 aa6.82□□□□□ -1.32
Cux1-204ENSMUST00000175975 Lama2Q60675 3118 aaKnown RBP6.82□□□□□ -1.32
Cux1-204ENSMUST00000175975 Dmxl1Q6PNC0 3013 aa6.8□□□□□ -1.32
Cux1-204ENSMUST00000175975 4933415A04RikQ9D443 101 aa6.78□□□□□ -1.32
Cux1-204ENSMUST00000175975 BptfA2A654 3036 aaKnown RBP6.77□□□□□ -1.33
Cux1-204ENSMUST00000175975 Muc2Q80Z19 2680 aa6.77□□□□□ -1.33
Cux1-204ENSMUST00000175975 FlncQ8VHX6 2726 aaKnown RBP6.75□□□□□ -1.33
Cux1-204ENSMUST00000175975 A730071L15RikQ8C4X0 137 aa6.75□□□□□ -1.33
Cux1-204ENSMUST00000175975 UtrnE9Q6R7 3430 aa6.74□□□□□ -1.33
Cux1-204ENSMUST00000175975 Igfn1Q3KNY0 2849 aa6.72□□□□□ -1.33
Cux1-204ENSMUST00000175975 Gm9112A2AI92 75 aa6.7□□□□□ -1.34
Cux1-204ENSMUST00000175975 Ranbp2Q9ERU9 3053 aaKnown RBP6.69□□□□□ -1.34
Cux1-204ENSMUST00000175975 Tenm1Q9WTS4 2731 aa6.69□□□□□ -1.34
Cux1-204ENSMUST00000175975 Gm21887J3QQ04 176 aa6.69□□□□□ -1.34
Cux1-204ENSMUST00000175975 Fbn2Q61555 2907 aa6.69□□□□□ -1.34
Cux1-204ENSMUST00000175975 Hivep1Q03172 2688 aa6.68□□□□□ -1.34
Cux1-204ENSMUST00000175975 Gm2310J3QNJ2 377 aa6.68□□□□□ -1.34
Cux1-204ENSMUST00000175975 Chd9Q8BYH8 2885 aa6.67□□□□□ -1.34
Cux1-204ENSMUST00000175975 Cystm1Q8K353 104 aa6.67□□□□□ -1.34
Cux1-204ENSMUST00000175975 Wdfy4E9Q2M9 3149 aa6.64□□□□□ -1.35
Cux1-204ENSMUST00000175975 Nf1Q04690 2841 aa6.63□□□□□ -1.35
Cux1-204ENSMUST00000175975 Pdzd2E9Q1M1 2796 aa6.63□□□□□ -1.35
Cux1-204ENSMUST00000175975 Gm17349F7BGH6 99 aa6.62□□□□□ -1.35
Cux1-204ENSMUST00000175975 TgO08710 2766 aa6.62□□□□□ -1.35
Cux1-204ENSMUST00000175975 Rev3lQ61493 3122 aa6.6□□□□□ -1.35
Cux1-204ENSMUST00000175975 Myo15bI7HPW8 3033 aa6.6□□□□□ -1.35
Cux1-204ENSMUST00000175975 FryE9Q8I9 3020 aa6.6□□□□□ -1.35
Cux1-204ENSMUST00000175975 Chd7A2AJK6 2986 aaKnown RBP6.57□□□□□ -1.36
Cux1-204ENSMUST00000175975 Krtap13O88375 197 aa6.57□□□□□ -1.36
Cux1-204ENSMUST00000175975 Vps13aQ5H8C4 3166 aa6.53□□□□□ -1.36
Cux1-204ENSMUST00000175975 Usp34Q6ZQ93 3582 aa6.52□□□□□ -1.37
Cux1-204ENSMUST00000175975 LrbaQ9ESE1 2856 aa6.52□□□□□ -1.37
Cux1-204ENSMUST00000175975 Cfap54Q8C6S9 3106 aa6.5□□□□□ -1.37
Cux1-204ENSMUST00000175975 Gm3233E9Q2H5 230 aa6.49□□□□□ -1.37
Cux1-204ENSMUST00000175975 Lelp1Q9DAE3 120 aa6.46□□□□□ -1.37
Cux1-204ENSMUST00000175975 Gm7173A0A0G2JEB6 3132 aa6.46□□□□□ -1.37
Cux1-204ENSMUST00000175975 Lama1P19137 3084 aa6.46□□□□□ -1.38
Cux1-204ENSMUST00000175975 Trank1Q8BV79 2999 aa6.45□□□□□ -1.38
Cux1-204ENSMUST00000175975 Krtap14O08640 167 aa6.45□□□□□ -1.38
Cux1-204ENSMUST00000175975 AtmQ62388 3066 aa6.44□□□□□ -1.38
Cux1-204ENSMUST00000175975 TrioQ0KL02 3102 aa6.44□□□□□ -1.38
Cux1-204ENSMUST00000175975 D6Ertd527eA0A0N4SWI3 464 aa6.44□□□□□ -1.38
Cux1-204ENSMUST00000175975 Gm7138L7N2C3 230 aa6.44□□□□□ -1.38
Cux1-204ENSMUST00000175975 Gm3238W4VSP7 230 aa6.44□□□□□ -1.38
Cux1-204ENSMUST00000175975 Tnp2P11378 117 aa6.43□□□□□ -1.38
Cux1-204ENSMUST00000175975 Unc80Q8BLN6 3261 aa6.42□□□□□ -1.38
Cux1-204ENSMUST00000175975 Dmxl2Q8BPN8 3032 aa6.41□□□□□ -1.38
Cux1-204ENSMUST00000175975 Lama3Q61789 3330 aa6.41□□□□□ -1.38
Cux1-204ENSMUST00000175975 Mki67E9PVX6 3177 aaKnown RBP6.4□□□□□ -1.39
Cux1-204ENSMUST00000175975 Megf8P60882 2789 aa6.37□□□□□ -1.39
Cux1-204ENSMUST00000175975 Gm7137J3QMW1 236 aa6.37□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 103.1 ms