RNA–Protein interactions for RNA: ENSMUST00000161609.7

Rc3h1-202, Transcript of Roquin-1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rc3h1, Length 11,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-202ENSMUST00000161609 HttP42859 3119 aa4.62□□□□□ -1.67
Rc3h1-202ENSMUST00000161609 TrioQ0KL02 3102 aa4.61□□□□□ -1.67
Rc3h1-202ENSMUST00000161609 Krtap16-1A2A5X5 502 aa4.59□□□□□ -1.67
Rc3h1-202ENSMUST00000161609 Gm9736A0A1W2P7N1 277 aa4.59□□□□□ -1.68
Rc3h1-202ENSMUST00000161609 Celsr3Q91ZI0 3301 aa4.59□□□□□ -1.68
Rc3h1-202ENSMUST00000161609 Rpl37Q9D823 97 aa4.59□□□□□ -1.68
Rc3h1-202ENSMUST00000161609 Usp9yF8VPU6 2556 aa4.58□□□□□ -1.68
Rc3h1-202ENSMUST00000161609 Frem2Q6NVD0 3160 aa4.56□□□□□ -1.68
Rc3h1-202ENSMUST00000161609 Cep192E9Q4Y4 2514 aaKnown RBP4.55□□□□□ -1.68
Rc3h1-202ENSMUST00000161609 Gm37013Q8K491 104 aa4.55□□□□□ -1.68
Rc3h1-202ENSMUST00000161609 Cdh23Q99PF4 3354 aa4.55□□□□□ -1.68
Rc3h1-202ENSMUST00000161609 Epg5Q80TA9 2572 aa4.54□□□□□ -1.68
Rc3h1-202ENSMUST00000161609 Piezo2Q8CD54 2822 aa4.53□□□□□ -1.68
Rc3h1-202ENSMUST00000161609 Prr13Q9CQJ5 137 aa4.53□□□□□ -1.68
Rc3h1-202ENSMUST00000161609 Unc80Q8BLN6 3261 aa4.52□□□□□ -1.69
Rc3h1-202ENSMUST00000161609 Usp24B1AY13 2617 aaKnown RBP4.52□□□□□ -1.69
Rc3h1-202ENSMUST00000161609 FasnP19096 2504 aaKnown RBP4.52□□□□□ -1.69
Rc3h1-202ENSMUST00000161609 Brca2P97929 3329 aa4.51□□□□□ -1.69
Rc3h1-202ENSMUST00000161609 4933428G20RikQ9D3X4 101 aa4.51□□□□□ -1.69
Rc3h1-202ENSMUST00000161609 Col12a1Q60847 3120 aa4.51□□□□□ -1.69
Rc3h1-202ENSMUST00000161609 Gm10139O88245 57 aa4.5□□□□□ -1.69
Rc3h1-202ENSMUST00000161609 A930033H14RikG5E8X6 103 aa4.49□□□□□ -1.69
Rc3h1-202ENSMUST00000161609 Prm2P07978 107 aa4.49□□□□□ -1.69
Rc3h1-202ENSMUST00000161609 MtorQ9JLN9 2549 aa4.49□□□□□ -1.69
Rc3h1-202ENSMUST00000161609 HrnrQ8VHD8 2496 aa4.48□□□□□ -1.69
Rc3h1-202ENSMUST00000161609 Krtap14O08640 167 aa4.48□□□□□ -1.69
Rc3h1-202ENSMUST00000161609 Col6a3E9PWQ3 3284 aa4.48□□□□□ -1.69
Rc3h1-202ENSMUST00000161609 Rev3lQ61493 3122 aa4.47□□□□□ -1.69
Rc3h1-202ENSMUST00000161609 Gm10643Q3URG9 111 aa4.47□□□□□ -1.69
Rc3h1-202ENSMUST00000161609 Ash1lQ99MY8 2958 aa4.47□□□□□ -1.69
Rc3h1-202ENSMUST00000161609 PolqQ8CGS6 2544 aa4.47□□□□□ -1.69
Rc3h1-202ENSMUST00000161609 Myo15aQ9QZZ4 3511 aa4.47□□□□□ -1.69
Rc3h1-202ENSMUST00000161609 Ranbp2Q9ERU9 3053 aaKnown RBP4.45□□□□□ -1.7
Rc3h1-202ENSMUST00000161609 Usp9xP70398 2559 aaKnown RBP4.45□□□□□ -1.7
Rc3h1-202ENSMUST00000161609 Bahcc1Q3UHR0 2643 aa4.43□□□□□ -1.7
Rc3h1-202ENSMUST00000161609 Dnah12Q3V0Q1 3086 aa4.42□□□□□ -1.7
Rc3h1-202ENSMUST00000161609 Gm7173A0A0G2JEB6 3132 aa4.42□□□□□ -1.7
Rc3h1-202ENSMUST00000161609 Gm6358A0A087WPH4 74 aa4.42□□□□□ -1.7
Rc3h1-202ENSMUST00000161609 Gm2310J3QNJ2 377 aa4.41□□□□□ -1.7
Rc3h1-202ENSMUST00000161609 Sprr2kO70562 68 aa4.41□□□□□ -1.7
Rc3h1-202ENSMUST00000161609 Sprr1aQ62266 144 aa4.41□□□□□ -1.7
Rc3h1-202ENSMUST00000161609 Ankrd11E9Q4F7 2643 aa4.41□□□□□ -1.7
Rc3h1-202ENSMUST00000161609 Dmxl2Q8BPN8 3032 aa4.39□□□□□ -1.71
Rc3h1-202ENSMUST00000161609 Tnp1P10856 55 aa4.39□□□□□ -1.71
Rc3h1-202ENSMUST00000161609 Setd2E9Q5F9 2537 aa4.38□□□□□ -1.71
Rc3h1-202ENSMUST00000161609 Lama2Q60675 3118 aaKnown RBP4.38□□□□□ -1.71
Rc3h1-202ENSMUST00000161609 Ndufaf8A2AMZ4 74 aa4.37□□□□□ -1.71
Rc3h1-202ENSMUST00000161609 AtmQ62388 3066 aa4.36□□□□□ -1.71
Rc3h1-202ENSMUST00000161609 Gm16253D3Z167 63 aa4.34□□□□□ -1.71
Rc3h1-202ENSMUST00000161609 Cox6b2Q80ZN9 88 aa4.34□□□□□ -1.72
Rc3h1-202ENSMUST00000161609 VcanQ62059 3357 aa4.33□□□□□ -1.72
Rc3h1-202ENSMUST00000161609 Dchs1E9PVD3 3291 aa4.33□□□□□ -1.72
Rc3h1-202ENSMUST00000161609 Vps13aQ5H8C4 3166 aa4.33□□□□□ -1.72
Rc3h1-202ENSMUST00000161609 AtrQ9JKK8 2635 aa4.31□□□□□ -1.72
Rc3h1-202ENSMUST00000161609 SpegQ62407 3262 aa4.31□□□□□ -1.72
Rc3h1-202ENSMUST00000161609 Fn1P11276 2477 aaKnown RBP4.31□□□□□ -1.72
Rc3h1-202ENSMUST00000161609 Cep350E9Q309 3095 aa4.29□□□□□ -1.72
Rc3h1-202ENSMUST00000161609 Abca12E9Q876 2595 aa4.29□□□□□ -1.72
Rc3h1-202ENSMUST00000161609 Nbeal1E9PYP2 2688 aa4.28□□□□□ -1.73
Rc3h1-202ENSMUST00000161609 Cystm1Q8K353 104 aa4.27□□□□□ -1.73
Rc3h1-202ENSMUST00000161609 Dchs2A0A0A6YW72 3346 aa4.27□□□□□ -1.73
Rc3h1-202ENSMUST00000161609 Cfap54Q8C6S9 3106 aa4.27□□□□□ -1.73
Rc3h1-202ENSMUST00000161609 Gm3646F6S692 53 aa4.27□□□□□ -1.73
Rc3h1-202ENSMUST00000161609 Hectd1Q69ZR2 2618 aaKnown RBP4.25□□□□□ -1.73
Rc3h1-202ENSMUST00000161609 Wdfy3Q6VNB8 3508 aa4.25□□□□□ -1.73
Rc3h1-202ENSMUST00000161609 Ankrd17Q99NH0 2603 aaKnown RBP4.23□□□□□ -1.73
Rc3h1-202ENSMUST00000161609 D6Ertd527eA0A0N4SWI3 464 aa4.23□□□□□ -1.73
Rc3h1-202ENSMUST00000161609 Unc79Q0KK59 2596 aa4.2□□□□□ -1.74
Rc3h1-202ENSMUST00000161609 Akap13E9Q394 2776 aa4.2□□□□□ -1.74
Rc3h1-202ENSMUST00000161609 Kmt2bO08550 2713 aa4.19□□□□□ -1.74
Rc3h1-202ENSMUST00000161609 Wdfy4E9Q2M9 3149 aa4.18□□□□□ -1.74
Rc3h1-202ENSMUST00000161609 Lrrc37aB1AWG4 3215 aa4.18□□□□□ -1.74
Rc3h1-202ENSMUST00000161609 2310061N02RikQ9D6S9 174 aa4.17□□□□□ -1.74
Rc3h1-202ENSMUST00000161609 PcntP48725 2898 aa4.17□□□□□ -1.74
Rc3h1-202ENSMUST00000161609 FryE9Q8I9 3020 aa4.17□□□□□ -1.74
Rc3h1-202ENSMUST00000161609 AspmQ8CJ27 3122 aa4.16□□□□□ -1.74
Rc3h1-202ENSMUST00000161609 Gm18596A0A1W2P860 280 aa4.16□□□□□ -1.74
Rc3h1-202ENSMUST00000161609 Celsr1O35161 3034 aa4.15□□□□□ -1.74
Rc3h1-202ENSMUST00000161609 Lama1P19137 3084 aa4.15□□□□□ -1.74
Rc3h1-202ENSMUST00000161609 FlnbQ80X90 2602 aaKnown RBP4.15□□□□□ -1.74
Rc3h1-202ENSMUST00000161609 Gm20537G3UYK7 97 aa4.15□□□□□ -1.75
Rc3h1-202ENSMUST00000161609 Stab1Q8R4Y4 2571 aa4.14□□□□□ -1.75
Rc3h1-202ENSMUST00000161609 SetxA2AKX3 2646 aa4.13□□□□□ -1.75
Rc3h1-202ENSMUST00000161609 CenpfE9Q3P4 2997 aaKnown RBP4.13□□□□□ -1.75
Rc3h1-202ENSMUST00000161609 MgaA2AWL7 3003 aaKnown RBP4.11□□□□□ -1.75
Rc3h1-202ENSMUST00000161609 A730071L15RikQ8C4X0 137 aa4.11□□□□□ -1.75
Rc3h1-202ENSMUST00000161609 Gm9195A0A140LHT4 2805 aa4.1□□□□□ -1.75
Rc3h1-202ENSMUST00000161609 Itpr3P70227 2670 aa4.08□□□□□ -1.76
Rc3h1-202ENSMUST00000161609 Zfp292Q9Z2U2 2698 aa4.07□□□□□ -1.76
Rc3h1-202ENSMUST00000161609 Tep1P97499 2629 aa4.06□□□□□ -1.76
Rc3h1-202ENSMUST00000161609 Notch1Q01705 2531 aa4.06□□□□□ -1.76
Rc3h1-202ENSMUST00000161609 Dmxl1Q6PNC0 3013 aa4.05□□□□□ -1.76
Rc3h1-202ENSMUST00000161609 Sprr2gO70558 76 aa4.05□□□□□ -1.76
Rc3h1-202ENSMUST00000161609 2210017I01RikA0A0A6YVV1 95 aa4.05□□□□□ -1.76
Rc3h1-202ENSMUST00000161609 Map1aQ9QYR6 2776 aa4.03□□□□□ -1.77
Rc3h1-202ENSMUST00000161609 Tnrc18Q80WC3 2878 aa4.02□□□□□ -1.77
Rc3h1-202ENSMUST00000161609 Rps29P62274 56 aa4.02□□□□□ -1.77
Rc3h1-202ENSMUST00000161609 KalrnA2CG49 2964 aa4.01□□□□□ -1.77
Rc3h1-202ENSMUST00000161609 Gm19402J3QJV4 266 aa4.01□□□□□ -1.77
Rc3h1-202ENSMUST00000161609 Muc5acE9QAQ8 3455 aa4□□□□□ -1.77
Retrieved 100 of 22,080 RNA–protein pairs in 93.4 ms