RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Ccdc179J3QM76 67 aa5.94□□□□□ -1.46
Col28a1-201ENSMUST00000115537 C130032M10RikQ8C888 123 aa5.93□□□□□ -1.46
Col28a1-201ENSMUST00000115537 Mrpl34Q99N91 92 aa5.93□□□□□ -1.46
Col28a1-201ENSMUST00000115537 HrnrQ8VHD8 2496 aa5.92□□□□□ -1.46
Col28a1-201ENSMUST00000115537 C530025M09RikF6RGA8 229 aa5.92□□□□□ -1.46
Col28a1-201ENSMUST00000115537 Wfdc10Q3V2J9 124 aa5.92□□□□□ -1.46
Col28a1-201ENSMUST00000115537 Elof1P60003 83 aa5.92□□□□□ -1.46
Col28a1-201ENSMUST00000115537 Gm16181B0V2H2 73 aa5.91□□□□□ -1.46
Col28a1-201ENSMUST00000115537 Cox6a2P43023 97 aa5.91□□□□□ -1.46
Col28a1-201ENSMUST00000115537 Zfhx3Q61329 3726 aa5.9□□□□□ -1.46
Col28a1-201ENSMUST00000115537 Igkv3-5A0A140T8M6 119 aa5.9□□□□□ -1.46
Col28a1-201ENSMUST00000115537 Igkv8-19A0A0G2JFN8 121 aa5.9□□□□□ -1.46
Col28a1-201ENSMUST00000115537 Phxr4P15974 95 aa5.9□□□□□ -1.46
Col28a1-201ENSMUST00000115537 Sprr1bQ62267 153 aa5.89□□□□□ -1.47
Col28a1-201ENSMUST00000115537 Gm44790A0A0N4SV91 103 aa5.89□□□□□ -1.47
Col28a1-201ENSMUST00000115537 Obox2E9PXV9 151 aa5.89□□□□□ -1.47
Col28a1-201ENSMUST00000115537 ApcQ61315 2845 aa5.88□□□□□ -1.47
Col28a1-201ENSMUST00000115537 Gm16485Q8C4B7 115 aa5.88□□□□□ -1.47
Col28a1-201ENSMUST00000115537 Gm17509Q9CZ61 145 aa5.88□□□□□ -1.47
Col28a1-201ENSMUST00000115537 Lypd5Q9D7Z7 256 aa5.88□□□□□ -1.47
Col28a1-201ENSMUST00000115537 AY074887Q8R5F9 132 aa5.88□□□□□ -1.47
Col28a1-201ENSMUST00000115537 A730071L15RikQ8C4X0 137 aa5.87□□□□□ -1.47
Col28a1-201ENSMUST00000115537 Ighv8-13A0A075B5Y0 101 aa5.87□□□□□ -1.47
Col28a1-201ENSMUST00000115537 Wfdc13Q5DQQ6 81 aa5.86□□□□□ -1.47
Col28a1-201ENSMUST00000115537 Igkv3-4A0A140T8Q4 119 aa5.86□□□□□ -1.47
Col28a1-201ENSMUST00000115537 Col7a1Q63870 2944 aa5.85□□□□□ -1.47
Col28a1-201ENSMUST00000115537 Gm10643Q3URG9 111 aa5.85□□□□□ -1.47
Col28a1-201ENSMUST00000115537 Reg3aO09037 175 aa5.85□□□□□ -1.47
Col28a1-201ENSMUST00000115537 Defb13Q8R2I4 64 aa5.85□□□□□ -1.47
Col28a1-201ENSMUST00000115537 SycnQ8VCK7 134 aa5.84□□□□□ -1.47
Col28a1-201ENSMUST00000115537 A730009L09RikA0A1B0GS82 72 aa5.84□□□□□ -1.48
Col28a1-201ENSMUST00000115537 1600014C23RikQ9DAX4 101 aa5.83□□□□□ -1.48
Col28a1-201ENSMUST00000115537 Gm21886J3QJU9 214 aa5.83□□□□□ -1.48
Col28a1-201ENSMUST00000115537 Psors1c2Q80ZC9 134 aa5.82□□□□□ -1.48
Col28a1-201ENSMUST00000115537 4933415A04RikQ9D443 101 aa5.82□□□□□ -1.48
Col28a1-201ENSMUST00000115537 P84750 121 aa5.82□□□□□ -1.48
Col28a1-201ENSMUST00000115537 Gm884A2A9H6 3643 aa5.81□□□□□ -1.48
Col28a1-201ENSMUST00000115537 Igkv3-3A0A140T8Q0 119 aa5.81□□□□□ -1.48
Col28a1-201ENSMUST00000115537 Krtap11-1E9Q2E9 183 aa5.8□□□□□ -1.48
Col28a1-201ENSMUST00000115537 Tenm1Q9WTS4 2731 aa5.79□□□□□ -1.48
Col28a1-201ENSMUST00000115537 1700018G05RikA0A1B0GSI2 66 aa5.79□□□□□ -1.48
Col28a1-201ENSMUST00000115537 Gm10837Q3UTT8 145 aa5.79□□□□□ -1.48
Col28a1-201ENSMUST00000115537 Svep1A2AVA0 3567 aa5.79□□□□□ -1.48
Col28a1-201ENSMUST00000115537 Muc4Q8JZM8 3443 aa5.79□□□□□ -1.48
Col28a1-201ENSMUST00000115537 Gm10160F6Y577 67 aa5.78□□□□□ -1.48
Col28a1-201ENSMUST00000115537 Gm17349F7BGH6 99 aa5.78□□□□□ -1.48
Col28a1-201ENSMUST00000115537 Q8K1L6 76 aa5.77□□□□□ -1.49
Col28a1-201ENSMUST00000115537 1700042G07RikB1AUF7 90 aa5.76□□□□□ -1.49
Col28a1-201ENSMUST00000115537 Gm20661K7N787 53 aa5.76□□□□□ -1.49
Col28a1-201ENSMUST00000115537 Gm26620Q9CY65 116 aa5.76□□□□□ -1.49
Col28a1-201ENSMUST00000115537 Snhg11Q4G0K9 87 aa5.75□□□□□ -1.49
Col28a1-201ENSMUST00000115537 Gm7276Q3TYW4 209 aa5.75□□□□□ -1.49
Col28a1-201ENSMUST00000115537 Gm28230A0A0A0MQ91 144 aa5.75□□□□□ -1.49
Col28a1-201ENSMUST00000115537 Phxr5P08399 672 aa5.74□□□□□ -1.49
Col28a1-201ENSMUST00000115537 Rpl37aP61514 92 aa5.74□□□□□ -1.49
Col28a1-201ENSMUST00000115537 OxtP35454 125 aa5.74□□□□□ -1.49
Col28a1-201ENSMUST00000115537 Chtf8P0CG14 533 aa5.74□□□□□ -1.49
Col28a1-201ENSMUST00000115537 AplnQ9R0R4 77 aa5.73□□□□□ -1.49
Col28a1-201ENSMUST00000115537 Fbn1Q61554 2873 aaKnown RBP5.73□□□□□ -1.49
Col28a1-201ENSMUST00000115537 Dmac1Q9CQ00 111 aa5.72□□□□□ -1.49
Col28a1-201ENSMUST00000115537 Gm9508A0A1W2P7W0 230 aa5.72□□□□□ -1.49
Col28a1-201ENSMUST00000115537 Adm2Q7TNK8 150 aa5.72□□□□□ -1.49
Col28a1-201ENSMUST00000115537 Smim29Q8R043 75 aa5.72□□□□□ -1.49
Col28a1-201ENSMUST00000115537 Gm3646F6S692 53 aa5.7□□□□□ -1.5
Col28a1-201ENSMUST00000115537 Igkv3-12A0A140T8P0 119 aa5.69□□□□□ -1.5
Col28a1-201ENSMUST00000115537 Limd2Q8BGB5 128 aa5.69□□□□□ -1.5
Col28a1-201ENSMUST00000115537 Sprr4Q8CGN8 76 aa5.69□□□□□ -1.5
Col28a1-201ENSMUST00000115537 Znf706Q9D115 76 aaKnown RBP5.68□□□□□ -1.5
Col28a1-201ENSMUST00000115537 Megf8P60882 2789 aa5.68□□□□□ -1.5
Col28a1-201ENSMUST00000115537 Plac8Q9JI48 112 aa5.67□□□□□ -1.5
Col28a1-201ENSMUST00000115537 Zcchc13Q9D548 170 aa5.66□□□□□ -1.5
Col28a1-201ENSMUST00000115537 Chchd10Q7TNL9 138 aa5.65□□□□□ -1.5
Col28a1-201ENSMUST00000115537 Fam168bQ80XQ8 194 aa5.65□□□□□ -1.5
Col28a1-201ENSMUST00000115537 Fam104aA2A6P4 185 aa5.65□□□□□ -1.51
Col28a1-201ENSMUST00000115537 Wfdc6bF6ULY1 148 aa5.65□□□□□ -1.51
Col28a1-201ENSMUST00000115537 Cmya5Q70KF4 3739 aa5.65□□□□□ -1.51
Col28a1-201ENSMUST00000115537 Gm11627A6PWP4 55 aa5.63□□□□□ -1.51
Col28a1-201ENSMUST00000115537 Phf5aP83870 110 aaKnown RBP5.63□□□□□ -1.51
Col28a1-201ENSMUST00000115537 Igkv3-7A0A0G2JE31 119 aa5.62□□□□□ -1.51
Col28a1-201ENSMUST00000115537 RetnlbQ99P86 105 aa5.61□□□□□ -1.51
Col28a1-201ENSMUST00000115537 Wfdc3Q14AE4 130 aa5.61□□□□□ -1.51
Col28a1-201ENSMUST00000115537 VwfQ8CIZ8 2813 aa5.61□□□□□ -1.51
Col28a1-201ENSMUST00000115537 AW011738F6S7Q2 159 aa5.61□□□□□ -1.51
Col28a1-201ENSMUST00000115537 TgO08710 2766 aa5.6□□□□□ -1.51
Col28a1-201ENSMUST00000115537 Muc6Q80T03 2850 aa5.6□□□□□ -1.51
Col28a1-201ENSMUST00000115537 Prol1E9PYQ4 312 aa5.59□□□□□ -1.51
Col28a1-201ENSMUST00000115537 Gm9821Q8K076 103 aa5.59□□□□□ -1.51
Col28a1-201ENSMUST00000115537 Gm37013Q8K491 104 aa5.58□□□□□ -1.52
Col28a1-201ENSMUST00000115537 Gm9507D3Z5T3 223 aa5.58□□□□□ -1.52
Col28a1-201ENSMUST00000115537 Uqcr11Q9CPX8 56 aa5.58□□□□□ -1.52
Col28a1-201ENSMUST00000115537 Tenm2Q9WTS5 2764 aa5.56□□□□□ -1.52
Col28a1-201ENSMUST00000115537 Gm10642Q3TWM1 71 aa5.56□□□□□ -1.52
Col28a1-201ENSMUST00000115537 Csmd2V9GX34 3611 aa5.56□□□□□ -1.52
Col28a1-201ENSMUST00000115537 Defb39Q70KL3 74 aa5.54□□□□□ -1.52
Col28a1-201ENSMUST00000115537 Gm10999F6Q4M4 69 aa5.53□□□□□ -1.52
Col28a1-201ENSMUST00000115537 Gm12216A0A1W2P827 62 aa5.53□□□□□ -1.52
Col28a1-201ENSMUST00000115537 Defb1P56386 69 aa5.52□□□□□ -1.53
Col28a1-201ENSMUST00000115537 Q8BGJ3 129 aa5.52□□□□□ -1.53
Col28a1-201ENSMUST00000115537 Cypt15B1AXS0 87 aa5.49□□□□□ -1.53
Col28a1-201ENSMUST00000115537 Mp68P56379 58 aa5.49□□□□□ -1.53
Retrieved 100 of 22,080 RNA–protein pairs in 80.6 ms