RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Defa27F2Z403 93 aa10.06□□□□□ -0.8
Trim39-203ENSMUST00000113706 A0A286YE02 88 aa10.05□□□□□ -0.8
Trim39-203ENSMUST00000113706 2310050C09RikG5E8Z3 280 aa10.03□□□□□ -0.8
Trim39-203ENSMUST00000113706 Dnah7aE9Q0T8 4024 aa10.03□□□□□ -0.8
Trim39-203ENSMUST00000113706 Ighv2-2A0A075B5P8 116 aa10.03□□□□□ -0.8
Trim39-203ENSMUST00000113706 P01821 116 aa10.03□□□□□ -0.8
Trim39-203ENSMUST00000113706 A930002H24RikQ8C8Y3 163 aa10.03□□□□□ -0.8
Trim39-203ENSMUST00000113706 1700012A03RikQ9DAF1 130 aa10.03□□□□□ -0.8
Trim39-203ENSMUST00000113706 A830005F24RikQ8BRT5 167 aa10.02□□□□□ -0.81
Trim39-203ENSMUST00000113706 Fam229bQ8CF36 80 aa10.02□□□□□ -0.81
Trim39-203ENSMUST00000113706 Ly6g6cQ9Z1Q4 126 aa10.02□□□□□ -0.81
Trim39-203ENSMUST00000113706 4930518I15RikQ3V2W7 57 aa10.01□□□□□ -0.81
Trim39-203ENSMUST00000113706 Igkv1-110A0A0B4J1I0 119 aa10.01□□□□□ -0.81
Trim39-203ENSMUST00000113706 Fam104aA2A6P4 185 aa10.01□□□□□ -0.81
Trim39-203ENSMUST00000113706 A330070K13RikQ8CA53 115 aa10□□□□□ -0.81
Trim39-203ENSMUST00000113706 PscaP57096 123 aa9.99□□□□□ -0.81
Trim39-203ENSMUST00000113706 U90926O08546 118 aa9.99□□□□□ -0.81
Trim39-203ENSMUST00000113706 Vpreb1P13372 142 aa9.99□□□□□ -0.81
Trim39-203ENSMUST00000113706 Cox6a2P43023 97 aa9.99□□□□□ -0.81
Trim39-203ENSMUST00000113706 P06320 134 aa9.98□□□□□ -0.81
Trim39-203ENSMUST00000113706 Phf5aP83870 110 aaKnown RBP9.97□□□□□ -0.81
Trim39-203ENSMUST00000113706 Serp2Q6TAW2 65 aa9.97□□□□□ -0.81
Trim39-203ENSMUST00000113706 Sprr2jO70561 109 aa9.96□□□□□ -0.81
Trim39-203ENSMUST00000113706 Ube2bP63147 152 aa9.96□□□□□ -0.81
Trim39-203ENSMUST00000113706 Dnah7cA0A087WR13 4024 aa9.96□□□□□ -0.81
Trim39-203ENSMUST00000113706 Sfta2E9PXB6 77 aa9.96□□□□□ -0.82
Trim39-203ENSMUST00000113706 Vpreb3D3Z6J4 130 aa9.95□□□□□ -0.82
Trim39-203ENSMUST00000113706 Gm37389A0A0A6YW05 95 aa9.94□□□□□ -0.82
Trim39-203ENSMUST00000113706 Gm10065F6TJM2 114 aa9.93□□□□□ -0.82
Trim39-203ENSMUST00000113706 Defb9Q8R2I6 67 aa9.93□□□□□ -0.82
Trim39-203ENSMUST00000113706 Fam19a3Q7TPG6 132 aa9.92□□□□□ -0.82
Trim39-203ENSMUST00000113706 Brk1Q91VR8 75 aa9.92□□□□□ -0.82
Trim39-203ENSMUST00000113706 Gm17521F6QAC8 156 aa9.91□□□□□ -0.82
Trim39-203ENSMUST00000113706 Defa28D3Z1V9 94 aa9.9□□□□□ -0.83
Trim39-203ENSMUST00000113706 Wfdc10Q3V2J9 124 aa9.89□□□□□ -0.83
Trim39-203ENSMUST00000113706 Krtap29-1A2A5X4 342 aa9.89□□□□□ -0.83
Trim39-203ENSMUST00000113706 Gm10401E9Q3K6 71 aa9.88□□□□□ -0.83
Trim39-203ENSMUST00000113706 Dnah5Q8VHE6 4621 aa9.88□□□□□ -0.83
Trim39-203ENSMUST00000113706 HrnrQ8VHD8 2496 aa9.87□□□□□ -0.83
Trim39-203ENSMUST00000113706 C130032M10RikQ8C888 123 aa9.87□□□□□ -0.83
Trim39-203ENSMUST00000113706 Gm10139O88245 57 aa9.86□□□□□ -0.83
Trim39-203ENSMUST00000113706 Krtap10-4Q08EG8 221 aa9.86□□□□□ -0.83
Trim39-203ENSMUST00000113706 Gm28374F6SG70 93 aa9.86□□□□□ -0.83
Trim39-203ENSMUST00000113706 6030445D17RikE9Q8F9 148 aa9.85□□□□□ -0.83
Trim39-203ENSMUST00000113706 Mrpl34Q99N91 92 aa9.84□□□□□ -0.83
Trim39-203ENSMUST00000113706 Ndufc1Q9CQY9 76 aa9.84□□□□□ -0.83
Trim39-203ENSMUST00000113706 Wfdc13Q5DQQ6 81 aa9.84□□□□□ -0.83
Trim39-203ENSMUST00000113706 Gm44790A0A0N4SV91 103 aa9.84□□□□□ -0.83
Trim39-203ENSMUST00000113706 Igkv3-4A0A140T8Q4 119 aa9.84□□□□□ -0.83
Trim39-203ENSMUST00000113706 1700018G05RikA0A1B0GSI2 66 aa9.83□□□□□ -0.84
Trim39-203ENSMUST00000113706 AI606181Q8C7B9 129 aa9.82□□□□□ -0.84
Trim39-203ENSMUST00000113706 Gm37013Q8K491 104 aa9.82□□□□□ -0.84
Trim39-203ENSMUST00000113706 Vps13dB1ART2 4390 aa9.82□□□□□ -0.84
Trim39-203ENSMUST00000113706 Gm10570F6VB42 170 aa9.82□□□□□ -0.84
Trim39-203ENSMUST00000113706 Odf3bQ5M8M2 238 aa9.81□□□□□ -0.84
Trim39-203ENSMUST00000113706 Samd13D3YUG0 102 aa9.8□□□□□ -0.84
Trim39-203ENSMUST00000113706 GhrhP16043 103 aa9.79□□□□□ -0.84
Trim39-203ENSMUST00000113706 Ube2aQ9Z255 152 aa9.79□□□□□ -0.84
Trim39-203ENSMUST00000113706 Gm12353A2AGJ4 60 aa9.78□□□□□ -0.84
Trim39-203ENSMUST00000113706 B230307C23RikQ8BLB2 64 aa9.78□□□□□ -0.84
Trim39-203ENSMUST00000113706 1600014C23RikQ9DAX4 101 aa9.77□□□□□ -0.84
Trim39-203ENSMUST00000113706 SnurfQ9WU12 71 aa9.77□□□□□ -0.84
Trim39-203ENSMUST00000113706 Gm27235Q3UW50 83 aa9.77□□□□□ -0.85
Trim39-203ENSMUST00000113706 Q8BT88 171 aa9.77□□□□□ -0.85
Trim39-203ENSMUST00000113706 Prr15lQ8JZM2 100 aa9.77□□□□□ -0.85
Trim39-203ENSMUST00000113706 Gm10642Q3TWM1 71 aa9.76□□□□□ -0.85
Trim39-203ENSMUST00000113706 Q8K1L6 76 aa9.75□□□□□ -0.85
Trim39-203ENSMUST00000113706 Dnah2P0C6F1 4456 aa9.74□□□□□ -0.85
Trim39-203ENSMUST00000113706 Igkv8-19A0A0G2JFN8 121 aa9.73□□□□□ -0.85
Trim39-203ENSMUST00000113706 BikO70337 150 aa9.73□□□□□ -0.85
Trim39-203ENSMUST00000113706 Tmem258P61166 79 aa9.73□□□□□ -0.85
Trim39-203ENSMUST00000113706 OxtP35454 125 aa9.73□□□□□ -0.85
Trim39-203ENSMUST00000113706 Adm2Q7TNK8 150 aa9.73□□□□□ -0.85
Trim39-203ENSMUST00000113706 UqcrqQ9CQ69 82 aa9.73□□□□□ -0.85
Trim39-203ENSMUST00000113706 NbdyA0A0N4SUI7 68 aa9.72□□□□□ -0.85
Trim39-203ENSMUST00000113706 Gpr15lA0A0B4J1N3 78 aa9.72□□□□□ -0.85
Trim39-203ENSMUST00000113706 Igkv3-7A0A0G2JE31 119 aa9.72□□□□□ -0.85
Trim39-203ENSMUST00000113706 Gm21886J3QJU9 214 aa9.71□□□□□ -0.86
Trim39-203ENSMUST00000113706 Igkv3-10A0A0G2JGN0 119 aa9.7□□□□□ -0.86
Trim39-203ENSMUST00000113706 Mrpl55Q9CZ83 127 aa9.7□□□□□ -0.86
Trim39-203ENSMUST00000113706 Gm28230A0A0A0MQ91 144 aa9.69□□□□□ -0.86
Trim39-203ENSMUST00000113706 Igkv3-5A0A140T8M6 119 aa9.69□□□□□ -0.86
Trim39-203ENSMUST00000113706 Chchd10Q7TNL9 138 aa9.69□□□□□ -0.86
Trim39-203ENSMUST00000113706 Gm19935A0A1B0GSF9 52 aa9.67□□□□□ -0.86
Trim39-203ENSMUST00000113706 Pkd1O08852 4293 aa9.66□□□□□ -0.86
Trim39-203ENSMUST00000113706 Tnp2P11378 117 aa9.65□□□□□ -0.87
Trim39-203ENSMUST00000113706 Spink8Q09TK9 105 aa9.64□□□□□ -0.87
Trim39-203ENSMUST00000113706 Krtap14O08640 167 aa9.63□□□□□ -0.87
Trim39-203ENSMUST00000113706 Reg3aO09037 175 aa9.62□□□□□ -0.87
Trim39-203ENSMUST00000113706 Krtap13O88375 197 aa9.62□□□□□ -0.87
Trim39-203ENSMUST00000113706 ApobE9Q414 4505 aa9.6□□□□□ -0.87
Trim39-203ENSMUST00000113706 Krtap10-10A0A1W2P7T6 217 aa9.6□□□□□ -0.87
Trim39-203ENSMUST00000113706 Rps28P62858 69 aaKnown RBP9.6□□□□□ -0.87
Trim39-203ENSMUST00000113706 Gm2696A0A1W2P709 240 aa9.59□□□□□ -0.87
Trim39-203ENSMUST00000113706 Hectd4E9Q2E4 4418 aa9.58□□□□□ -0.88
Trim39-203ENSMUST00000113706 Stard9Q80TF6 4561 aa9.56□□□□□ -0.88
Trim39-203ENSMUST00000113706 Defb39Q70KL3 74 aa9.56□□□□□ -0.88
Trim39-203ENSMUST00000113706 Rpl37aP61514 92 aa9.55□□□□□ -0.88
Trim39-203ENSMUST00000113706 Anapc11Q9CPX9 84 aa9.55□□□□□ -0.88
Trim39-203ENSMUST00000113706 Znf706Q9D115 76 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 65.3 ms