RNA–Protein interactions for RNA: ENSMUST00000078752.9

Casc4-201, Transcript of Protein CASC4, mousemouse

TSL 1 (best) BASIC

Gene Casc4, Length 4,215 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-201ENSMUST00000078752 Phxr5P08399 672 aa10.01□□□□□ -0.81
Casc4-201ENSMUST00000078752 Srsf12Q8C8K3 266 aa10□□□□□ -0.81
Casc4-201ENSMUST00000078752 Gm43218A0A0G2JGT0 114 aa9.99□□□□□ -0.81
Casc4-201ENSMUST00000078752 Wfdc3Q14AE4 130 aa9.99□□□□□ -0.81
Casc4-201ENSMUST00000078752 Akap9Q70FJ1 3797 aa9.99□□□□□ -0.81
Casc4-201ENSMUST00000078752 1700042G07RikB1AUF7 90 aa9.98□□□□□ -0.81
Casc4-201ENSMUST00000078752 Igsf10Q3V1M1 2594 aa9.98□□□□□ -0.81
Casc4-201ENSMUST00000078752 Igkv3-12A0A140T8P0 119 aa9.97□□□□□ -0.81
Casc4-201ENSMUST00000078752 Gm7276Q3TYW4 209 aa9.97□□□□□ -0.81
Casc4-201ENSMUST00000078752 Zfhx4Q9JJN2 3550 aa9.97□□□□□ -0.81
Casc4-201ENSMUST00000078752 Krtap11-1E9Q2E9 183 aa9.97□□□□□ -0.81
Casc4-201ENSMUST00000078752 Gm26620Q9CY65 116 aa9.97□□□□□ -0.81
Casc4-201ENSMUST00000078752 Limd2Q8BGB5 128 aa9.96□□□□□ -0.82
Casc4-201ENSMUST00000078752 Igkv3-7A0A0G2JE31 119 aa9.95□□□□□ -0.82
Casc4-201ENSMUST00000078752 Gm3646F6S692 53 aa9.95□□□□□ -0.82
Casc4-201ENSMUST00000078752 A730071L15RikQ8C4X0 137 aa9.93□□□□□ -0.82
Casc4-201ENSMUST00000078752 4933415A04RikQ9D443 101 aa9.93□□□□□ -0.82
Casc4-201ENSMUST00000078752 Znf706Q9D115 76 aaKnown RBP9.93□□□□□ -0.82
Casc4-201ENSMUST00000078752 SycnQ8VCK7 134 aa9.92□□□□□ -0.82
Casc4-201ENSMUST00000078752 Smim29Q8R043 75 aa9.91□□□□□ -0.82
Casc4-201ENSMUST00000078752 Nf1Q04690 2841 aa9.91□□□□□ -0.82
Casc4-201ENSMUST00000078752 LrbaQ9ESE1 2856 aa9.9□□□□□ -0.82
Casc4-201ENSMUST00000078752 9530053A07RikE9PVG8 2581 aa9.9□□□□□ -0.83
Casc4-201ENSMUST00000078752 Lypd5Q9D7Z7 256 aa9.9□□□□□ -0.83
Casc4-201ENSMUST00000078752 Defb1P56386 69 aa9.89□□□□□ -0.83
Casc4-201ENSMUST00000078752 Stab2Q8R4U0 2559 aa9.89□□□□□ -0.83
Casc4-201ENSMUST00000078752 Fam168bQ80XQ8 194 aa9.89□□□□□ -0.83
Casc4-201ENSMUST00000078752 Gm16485Q8C4B7 115 aa9.87□□□□□ -0.83
Casc4-201ENSMUST00000078752 Dmac1Q9CQ00 111 aa9.87□□□□□ -0.83
Casc4-201ENSMUST00000078752 Gm12216A0A1W2P827 62 aa9.87□□□□□ -0.83
Casc4-201ENSMUST00000078752 Krtap24-1G3X9A2 248 aa9.87□□□□□ -0.83
Casc4-201ENSMUST00000078752 Gm9821Q8K076 103 aa9.87□□□□□ -0.83
Casc4-201ENSMUST00000078752 Sprr1bQ62267 153 aa9.86□□□□□ -0.83
Casc4-201ENSMUST00000078752 Smg1Q8BKX6 3658 aaKnown RBP9.86□□□□□ -0.83
Casc4-201ENSMUST00000078752 Nupr2Q497P3 102 aa9.85□□□□□ -0.83
Casc4-201ENSMUST00000078752 Gm16181B0V2H2 73 aa9.84□□□□□ -0.83
Casc4-201ENSMUST00000078752 Ighv8-13A0A075B5Y0 101 aa9.83□□□□□ -0.84
Casc4-201ENSMUST00000078752 Wfdc17Q5SSJ1 76 aa9.83□□□□□ -0.84
Casc4-201ENSMUST00000078752 Vps13cQ8BX70 3748 aa9.83□□□□□ -0.84
Casc4-201ENSMUST00000078752 Gm10999F6Q4M4 69 aa9.82□□□□□ -0.84
Casc4-201ENSMUST00000078752 Zcchc13Q9D548 170 aa9.78□□□□□ -0.84
Casc4-201ENSMUST00000078752 Wfdc6bF6ULY1 148 aa9.77□□□□□ -0.85
Casc4-201ENSMUST00000078752 Sprr4Q8CGN8 76 aa9.77□□□□□ -0.85
Casc4-201ENSMUST00000078752 Fam104aA2A6P4 185 aa9.75□□□□□ -0.85
Casc4-201ENSMUST00000078752 Snhg11Q4G0K9 87 aa9.74□□□□□ -0.85
Casc4-201ENSMUST00000078752 Q8BGJ3 129 aa9.74□□□□□ -0.85
Casc4-201ENSMUST00000078752 Zfhx3Q61329 3726 aa9.74□□□□□ -0.85
Casc4-201ENSMUST00000078752 Uqcr11Q9CPX8 56 aa9.73□□□□□ -0.85
Casc4-201ENSMUST00000078752 Mp68P56379 58 aa9.72□□□□□ -0.85
Casc4-201ENSMUST00000078752 Defb10Q8R2I8 73 aa9.72□□□□□ -0.85
Casc4-201ENSMUST00000078752 1600014C23RikQ9DAX4 101 aa9.7□□□□□ -0.86
Casc4-201ENSMUST00000078752 Muc5acE9QAQ8 3455 aa9.7□□□□□ -0.86
Casc4-201ENSMUST00000078752 Gm884A2A9H6 3643 aa9.7□□□□□ -0.86
Casc4-201ENSMUST00000078752 Defb39Q70KL3 74 aa9.7□□□□□ -0.86
Casc4-201ENSMUST00000078752 Gm11627A6PWP4 55 aa9.69□□□□□ -0.86
Casc4-201ENSMUST00000078752 Helz2E9QAM5 2947 aaKnown RBP9.69□□□□□ -0.86
Casc4-201ENSMUST00000078752 Gm7137J3QMW1 236 aa9.68□□□□□ -0.86
Casc4-201ENSMUST00000078752 Ly6g6cQ9Z1Q4 126 aa9.67□□□□□ -0.86
Casc4-201ENSMUST00000078752 OxtP35454 125 aa9.67□□□□□ -0.86
Casc4-201ENSMUST00000078752 Phf5aP83870 110 aaKnown RBP9.67□□□□□ -0.86
Casc4-201ENSMUST00000078752 Gm7138L7N2C3 230 aa9.66□□□□□ -0.86
Casc4-201ENSMUST00000078752 Gm3238W4VSP7 230 aa9.66□□□□□ -0.86
Casc4-201ENSMUST00000078752 Psors1c2Q80ZC9 134 aa9.65□□□□□ -0.86
Casc4-201ENSMUST00000078752 Gm10642Q3TWM1 71 aa9.64□□□□□ -0.87
Casc4-201ENSMUST00000078752 Adm2Q7TNK8 150 aa9.61□□□□□ -0.87
Casc4-201ENSMUST00000078752 Cypt15B1AXS0 87 aa9.6□□□□□ -0.87
Casc4-201ENSMUST00000078752 Q8K1L6 76 aa9.59□□□□□ -0.87
Casc4-201ENSMUST00000078752 Prol1E9PYQ4 312 aa9.58□□□□□ -0.88
Casc4-201ENSMUST00000078752 AplnQ9R0R4 77 aa9.58□□□□□ -0.88
Casc4-201ENSMUST00000078752 Itpr2Q9Z329 2701 aa9.54□□□□□ -0.88
Casc4-201ENSMUST00000078752 Gm37013Q8K491 104 aa9.54□□□□□ -0.88
Casc4-201ENSMUST00000078752 Pdzd2E9Q1M1 2796 aa9.52□□□□□ -0.89
Casc4-201ENSMUST00000078752 ApcQ61315 2845 aa9.5□□□□□ -0.89
Casc4-201ENSMUST00000078752 Gm21798J3QNU5 87 aa9.5□□□□□ -0.89
Casc4-201ENSMUST00000078752 CriptO70333 101 aa9.49□□□□□ -0.89
Casc4-201ENSMUST00000078752 Gm3880A0A1B0GSB3 72 aa9.48□□□□□ -0.89
Casc4-201ENSMUST00000078752 Anapc11Q9CPX9 84 aa9.46□□□□□ -0.9
Casc4-201ENSMUST00000078752 Muc4Q8JZM8 3443 aa9.44□□□□□ -0.9
Casc4-201ENSMUST00000078752 6030445D17RikE9Q8F9 148 aa9.43□□□□□ -0.9
Casc4-201ENSMUST00000078752 Spaca4Q80ZQ0 127 aa9.43□□□□□ -0.9
Casc4-201ENSMUST00000078752 Cypt14J3QPF7 87 aa9.41□□□□□ -0.9
Casc4-201ENSMUST00000078752 Lama5Q61001 3718 aa9.4□□□□□ -0.9
Casc4-201ENSMUST00000078752 Tenm3Q9WTS6 2715 aa9.4□□□□□ -0.9
Casc4-201ENSMUST00000078752 Svep1A2AVA0 3567 aa9.4□□□□□ -0.91
Casc4-201ENSMUST00000078752 Gm20538F6Z9R1 75 aa9.38□□□□□ -0.91
Casc4-201ENSMUST00000078752 Cmya5Q70KF4 3739 aa9.38□□□□□ -0.91
Casc4-201ENSMUST00000078752 Pla2g10Q9QXX3 151 aa9.37□□□□□ -0.91
Casc4-201ENSMUST00000078752 2310034C09RikQ9D746 214 aa9.37□□□□□ -0.91
Casc4-201ENSMUST00000078752 4930507D05RikQ8C9C9 103 aa9.34□□□□□ -0.91
Casc4-201ENSMUST00000078752 Gm27235Q3UW50 83 aa9.34□□□□□ -0.91
Casc4-201ENSMUST00000078752 Odf3bQ5M8M2 238 aa9.32□□□□□ -0.92
Casc4-201ENSMUST00000078752 Gpr15lA0A0B4J1N3 78 aa9.32□□□□□ -0.92
Casc4-201ENSMUST00000078752 Plac8Q9JI48 112 aa9.3□□□□□ -0.92
Casc4-201ENSMUST00000078752 Defb9Q8R2I6 67 aa9.27□□□□□ -0.93
Casc4-201ENSMUST00000078752 TgO08710 2766 aa9.26□□□□□ -0.93
Casc4-201ENSMUST00000078752 Gm17606F6ZL36 78 aa9.26□□□□□ -0.93
Casc4-201ENSMUST00000078752 Gm36176A0A1W2P8D5 158 aa9.26□□□□□ -0.93
Casc4-201ENSMUST00000078752 OtogO55225 2910 aa9.26□□□□□ -0.93
Casc4-201ENSMUST00000078752 Srrm2Q8BTI8 2703 aaKnown RBP9.25□□□□□ -0.93
Casc4-201ENSMUST00000078752 Rnase13Q5GAM7 153 aa9.23□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms