RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Acyp1P56376 99 aa5.46□□□□□ -1.54
Upf3b-201ENSMUST00000076265 Defb12Q8K4N3 78 aa5.46□□□□□ -1.54
Upf3b-201ENSMUST00000076265 Tenm2Q9WTS5 2764 aa5.45□□□□□ -1.54
Upf3b-201ENSMUST00000076265 IgipA0A1B0GR74 53 aa5.45□□□□□ -1.54
Upf3b-201ENSMUST00000076265 Gm8439G3UWA7 96 aa5.45□□□□□ -1.54
Upf3b-201ENSMUST00000076265 P01658 132 aa5.45□□□□□ -1.54
Upf3b-201ENSMUST00000076265 Cd52Q64389 74 aa5.44□□□□□ -1.54
Upf3b-201ENSMUST00000076265 Pkd1l1Q8R526 2615 aa5.43□□□□□ -1.54
Upf3b-201ENSMUST00000076265 Muc6Q80T03 2850 aa5.43□□□□□ -1.54
Upf3b-201ENSMUST00000076265 Gm5965D3Z724 196 aa5.43□□□□□ -1.54
Upf3b-201ENSMUST00000076265 Ccl1P10146 92 aa5.43□□□□□ -1.54
Upf3b-201ENSMUST00000076265 ClcP97400 68 aa5.43□□□□□ -1.54
Upf3b-201ENSMUST00000076265 9230109A22RikQ8BHE6 111 aa5.43□□□□□ -1.54
Upf3b-201ENSMUST00000076265 Tmem167aQ9CR64 72 aa5.43□□□□□ -1.54
Upf3b-201ENSMUST00000076265 Igkv1-133A0A0B4J1H8 120 aa5.42□□□□□ -1.54
Upf3b-201ENSMUST00000076265 Krtap13O88375 197 aa5.42□□□□□ -1.54
Upf3b-201ENSMUST00000076265 Tmem263Q9DAM7 115 aa5.42□□□□□ -1.54
Upf3b-201ENSMUST00000076265 Ubl5Q9EPV8 73 aa5.42□□□□□ -1.54
Upf3b-201ENSMUST00000076265 Gm5941Q497P9 117 aa5.41□□□□□ -1.54
Upf3b-201ENSMUST00000076265 Igkv8-26A0A075B5N5 123 aa5.41□□□□□ -1.54
Upf3b-201ENSMUST00000076265 Gm9513B3GLJ6 99 aa5.41□□□□□ -1.54
Upf3b-201ENSMUST00000076265 4930524J08RikQ9CUJ5 163 aa5.41□□□□□ -1.54
Upf3b-201ENSMUST00000076265 Trav9-2A0A075B647 113 aa5.4□□□□□ -1.54
Upf3b-201ENSMUST00000076265 Trav9n-2A0A0G2JDP3 113 aa5.4□□□□□ -1.54
Upf3b-201ENSMUST00000076265 Dnah10D3YYQ8 4591 aa5.4□□□□□ -1.55
Upf3b-201ENSMUST00000076265 Usmg5Q78IK2 58 aa5.4□□□□□ -1.55
Upf3b-201ENSMUST00000076265 Igkv4-74A0A0B4J1I3 119 aa5.39□□□□□ -1.55
Upf3b-201ENSMUST00000076265 Igkv4-71A0A0G2JEH0 117 aa5.39□□□□□ -1.55
Upf3b-201ENSMUST00000076265 4930546C10RikE9Q4Y3 121 aa5.39□□□□□ -1.55
Upf3b-201ENSMUST00000076265 Ndufa4Q62425 82 aaKnown RBP5.39□□□□□ -1.55
Upf3b-201ENSMUST00000076265 FasnP19096 2504 aaKnown RBP5.38□□□□□ -1.55
Upf3b-201ENSMUST00000076265 Dnah6E9Q0B6 4144 aa5.38□□□□□ -1.55
Upf3b-201ENSMUST00000076265 Spink4O35679 86 aa5.37□□□□□ -1.55
Upf3b-201ENSMUST00000076265 Q99M08 65 aa5.36□□□□□ -1.55
Upf3b-201ENSMUST00000076265 Minos1Q7TNS2 76 aa5.36□□□□□ -1.55
Upf3b-201ENSMUST00000076265 Krtap4-2B1AQ85 167 aa5.35□□□□□ -1.55
Upf3b-201ENSMUST00000076265 Defb9Q8R2I6 67 aa5.35□□□□□ -1.55
Upf3b-201ENSMUST00000076265 Notch1Q01705 2531 aa5.35□□□□□ -1.55
Upf3b-201ENSMUST00000076265 Gm4707V9GXN5 68 aa5.33□□□□□ -1.56
Upf3b-201ENSMUST00000076265 Tmem14cQ9CQN6 114 aa5.32□□□□□ -1.56
Upf3b-201ENSMUST00000076265 Gm17732E9Q5I2 61 aa5.32□□□□□ -1.56
Upf3b-201ENSMUST00000076265 Gm17349F7BGH6 99 aa5.32□□□□□ -1.56
Upf3b-201ENSMUST00000076265 Prr15lQ8JZM2 100 aa5.32□□□□□ -1.56
Upf3b-201ENSMUST00000076265 Gm10509O88255 85 aa5.31□□□□□ -1.56
Upf3b-201ENSMUST00000076265 Sfta2E9PXB6 77 aa5.31□□□□□ -1.56
Upf3b-201ENSMUST00000076265 Ly6lH3BJG9 140 aa5.31□□□□□ -1.56
Upf3b-201ENSMUST00000076265 Gm10553J3QPF1 123 aa5.31□□□□□ -1.56
Upf3b-201ENSMUST00000076265 Tfpi2O35536 230 aa5.3□□□□□ -1.56
Upf3b-201ENSMUST00000076265 Gm21748Q3UE70 102 aa5.3□□□□□ -1.56
Upf3b-201ENSMUST00000076265 Igkv8-18A0A0B4J1J3 123 aa5.3□□□□□ -1.56
Upf3b-201ENSMUST00000076265 Rnase2aQ8K196 155 aa5.3□□□□□ -1.56
Upf3b-201ENSMUST00000076265 Pde6gP09174 87 aa5.29□□□□□ -1.56
Upf3b-201ENSMUST00000076265 Dnah14A0A140LIJ4 4489 aa5.29□□□□□ -1.56
Upf3b-201ENSMUST00000076265 Krtap14O08640 167 aa5.26□□□□□ -1.57
Upf3b-201ENSMUST00000076265 P01659 112 aa5.26□□□□□ -1.57
Upf3b-201ENSMUST00000076265 Tmem167bQ80X45 74 aa5.26□□□□□ -1.57
Upf3b-201ENSMUST00000076265 Sprr2jO70561 109 aa5.25□□□□□ -1.57
Upf3b-201ENSMUST00000076265 Ear1P97426 155 aa5.25□□□□□ -1.57
Upf3b-201ENSMUST00000076265 Lce1mQ9CR91 182 aa5.25□□□□□ -1.57
Upf3b-201ENSMUST00000076265 Igkv8-28A0A0G2JE47 121 aa5.24□□□□□ -1.57
Upf3b-201ENSMUST00000076265 PrkdcP97313 4128 aa5.23□□□□□ -1.57
Upf3b-201ENSMUST00000076265 Gm9805F6YK59 57 aa5.23□□□□□ -1.57
Upf3b-201ENSMUST00000076265 LorP18165 486 aa5.23□□□□□ -1.57
Upf3b-201ENSMUST00000076265 Fxyd4Q9D2W0 88 aa5.23□□□□□ -1.57
Upf3b-201ENSMUST00000076265 Gm35549A0A0N4SUS7 141 aa5.21□□□□□ -1.58
Upf3b-201ENSMUST00000076265 Wfdc15aQ8BH89 80 aa5.2□□□□□ -1.58
Upf3b-201ENSMUST00000076265 Igkv1-122A0A140T8M9 119 aa5.2□□□□□ -1.58
Upf3b-201ENSMUST00000076265 Gm20661K7N787 53 aa5.2□□□□□ -1.58
Upf3b-201ENSMUST00000076265 3110018I06RikQ9CXS0 120 aa5.2□□□□□ -1.58
Upf3b-201ENSMUST00000076265 Csmd3Q80T79 3707 aa5.19□□□□□ -1.58
Upf3b-201ENSMUST00000076265 Igkv8-19A0A0G2JFN8 121 aa5.19□□□□□ -1.58
Upf3b-201ENSMUST00000076265 Igkv8-24A0A140T8P5 121 aa5.19□□□□□ -1.58
Upf3b-201ENSMUST00000076265 Kmt2aP55200 3966 aa5.18□□□□□ -1.58
Upf3b-201ENSMUST00000076265 Gm10065F6TJM2 114 aa5.18□□□□□ -1.58
Upf3b-201ENSMUST00000076265 Uqcr11Q9CPX8 56 aa5.18□□□□□ -1.58
Upf3b-201ENSMUST00000076265 Wfdc15bQ9JHY4 80 aa5.18□□□□□ -1.58
Upf3b-201ENSMUST00000076265 Igkv4-59A0A0B4J1I8 117 aa5.17□□□□□ -1.58
Upf3b-201ENSMUST00000076265 Gm9945Q8BNZ3 91 aa5.17□□□□□ -1.58
Upf3b-201ENSMUST00000076265 TgO08710 2766 aa5.16□□□□□ -1.58
Upf3b-201ENSMUST00000076265 Fras1Q80T14 4010 aa5.15□□□□□ -1.59
Upf3b-201ENSMUST00000076265 Huwe1Q7TMY8 4377 aaKnown RBP5.15□□□□□ -1.59
Upf3b-201ENSMUST00000076265 Gm16381A0A1Y7VKT9 73 aa5.14□□□□□ -1.59
Upf3b-201ENSMUST00000076265 OdaphJ3QNT8 126 aa5.14□□□□□ -1.59
Upf3b-201ENSMUST00000076265 Gm9508A0A1W2P7W0 230 aa5.14□□□□□ -1.59
Upf3b-201ENSMUST00000076265 PscaP57096 123 aa5.14□□□□□ -1.59
Upf3b-201ENSMUST00000076265 B930094E09RikQ8C4T2 136 aa5.14□□□□□ -1.59
Upf3b-201ENSMUST00000076265 Defb37Q7TMD2 62 aa5.11□□□□□ -1.59
Upf3b-201ENSMUST00000076265 A0A286YE49 62 aa5.11□□□□□ -1.59
Upf3b-201ENSMUST00000076265 4930507D05RikQ8C9C9 103 aa5.11□□□□□ -1.59
Upf3b-201ENSMUST00000076265 Stab2Q8R4U0 2559 aa5.1□□□□□ -1.59
Upf3b-201ENSMUST00000076265 PrlhG3UWC3 86 aa5.1□□□□□ -1.59
Upf3b-201ENSMUST00000076265 Rpl37aP61514 92 aa5.1□□□□□ -1.59
Upf3b-201ENSMUST00000076265 Krtap1-3A2A588 173 aa5.09□□□□□ -1.59
Upf3b-201ENSMUST00000076265 Wfdc13Q5DQQ6 81 aa5.09□□□□□ -1.59
Upf3b-201ENSMUST00000076265 Igkv4-69A0A0B4J1I6 116 aa5.09□□□□□ -1.59
Upf3b-201ENSMUST00000076265 A930033H14RikG5E8X6 103 aa5.08□□□□□ -1.6
Upf3b-201ENSMUST00000076265 CnfnQ6PCW6 111 aa5.08□□□□□ -1.6
Upf3b-201ENSMUST00000076265 Gm9918Q8BUR5 174 aa5.08□□□□□ -1.6
Upf3b-201ENSMUST00000076265 Gm37013Q8K491 104 aa5.08□□□□□ -1.6
Upf3b-201ENSMUST00000076265 Gm9507D3Z5T3 223 aa5.08□□□□□ -1.6
Retrieved 100 of 22,080 RNA–protein pairs in 92.4 ms