RNA–Protein interactions for RNA: ENSMUST00000075084.4

Trim58-201, Transcript of E3 ubiquitin-protein ligase TRIM58, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim58, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58-201ENSMUST00000075084 Vpreb3D3Z6J4 130 aa11.61□□□□□ -0.55
Trim58-201ENSMUST00000075084 Sprr2jO70561 109 aa11.61□□□□□ -0.55
Trim58-201ENSMUST00000075084 Dnah7cA0A087WR13 4024 aa11.6□□□□□ -0.55
Trim58-201ENSMUST00000075084 7530416G11RikJ3QJX6 159 aa11.6□□□□□ -0.55
Trim58-201ENSMUST00000075084 PscaP57096 123 aa11.59□□□□□ -0.55
Trim58-201ENSMUST00000075084 Apoc4Q61268 124 aa11.59□□□□□ -0.55
Trim58-201ENSMUST00000075084 2310050C09RikG5E8Z3 280 aa11.57□□□□□ -0.56
Trim58-201ENSMUST00000075084 ScxQ64124 207 aa11.57□□□□□ -0.56
Trim58-201ENSMUST00000075084 Gm10401E9Q3K6 71 aa11.56□□□□□ -0.56
Trim58-201ENSMUST00000075084 A330070K13RikQ8CA53 115 aa11.56□□□□□ -0.56
Trim58-201ENSMUST00000075084 Phf5aP83870 110 aaKnown RBP11.55□□□□□ -0.56
Trim58-201ENSMUST00000075084 1700012A03RikQ9DAF1 130 aa11.55□□□□□ -0.56
Trim58-201ENSMUST00000075084 Igkv1-110A0A0B4J1I0 119 aa11.54□□□□□ -0.56
Trim58-201ENSMUST00000075084 Defa28D3Z1V9 94 aa11.54□□□□□ -0.56
Trim58-201ENSMUST00000075084 Plac8Q9JI48 112 aa11.54□□□□□ -0.56
Trim58-201ENSMUST00000075084 D130052B06RikQ3UW13 202 aa11.53□□□□□ -0.56
Trim58-201ENSMUST00000075084 Gm17521F6QAC8 156 aa11.52□□□□□ -0.57
Trim58-201ENSMUST00000075084 PkigO70139 76 aa11.51□□□□□ -0.57
Trim58-201ENSMUST00000075084 Fam229bQ8CF36 80 aa11.5□□□□□ -0.57
Trim58-201ENSMUST00000075084 OxtP35454 125 aa11.5□□□□□ -0.57
Trim58-201ENSMUST00000075084 Defa7P50705 93 aa11.5□□□□□ -0.57
Trim58-201ENSMUST00000075084 Naa38Q9D2U5 125 aa11.5□□□□□ -0.57
Trim58-201ENSMUST00000075084 Gm28539A0A087WSL9 92 aa11.49□□□□□ -0.57
Trim58-201ENSMUST00000075084 Gm10139O88245 57 aa11.48□□□□□ -0.57
Trim58-201ENSMUST00000075084 Wfdc10Q3V2J9 124 aa11.48□□□□□ -0.57
Trim58-201ENSMUST00000075084 Serp2Q6TAW2 65 aa11.48□□□□□ -0.57
Trim58-201ENSMUST00000075084 Defb9Q8R2I6 67 aa11.48□□□□□ -0.57
Trim58-201ENSMUST00000075084 4930518I15RikQ3V2W7 57 aa11.47□□□□□ -0.57
Trim58-201ENSMUST00000075084 Gm12353A2AGJ4 60 aa11.45□□□□□ -0.58
Trim58-201ENSMUST00000075084 Wfdc13Q5DQQ6 81 aa11.45□□□□□ -0.58
Trim58-201ENSMUST00000075084 1700018G05RikA0A1B0GSI2 66 aa11.44□□□□□ -0.58
Trim58-201ENSMUST00000075084 C130032M10RikQ8C888 123 aa11.44□□□□□ -0.58
Trim58-201ENSMUST00000075084 Igkv3-4A0A140T8Q4 119 aa11.44□□□□□ -0.58
Trim58-201ENSMUST00000075084 Gm10065F6TJM2 114 aa11.44□□□□□ -0.58
Trim58-201ENSMUST00000075084 Fam19a3Q7TPG6 132 aa11.43□□□□□ -0.58
Trim58-201ENSMUST00000075084 AI606181Q8C7B9 129 aa11.43□□□□□ -0.58
Trim58-201ENSMUST00000075084 Mrpl34Q99N91 92 aa11.43□□□□□ -0.58
Trim58-201ENSMUST00000075084 Vps13dB1ART2 4390 aa11.43□□□□□ -0.58
Trim58-201ENSMUST00000075084 Gm44790A0A0N4SV91 103 aa11.42□□□□□ -0.58
Trim58-201ENSMUST00000075084 Ndufc1Q9CQY9 76 aa11.41□□□□□ -0.58
Trim58-201ENSMUST00000075084 Gm20726G3UX18 150 aa11.4□□□□□ -0.59
Trim58-201ENSMUST00000075084 SmcpP15265 143 aa11.4□□□□□ -0.59
Trim58-201ENSMUST00000075084 6030445D17RikE9Q8F9 148 aa11.39□□□□□ -0.59
Trim58-201ENSMUST00000075084 Gm37013Q8K491 104 aa11.39□□□□□ -0.59
Trim58-201ENSMUST00000075084 Krtap29-1A2A5X4 342 aa11.38□□□□□ -0.59
Trim58-201ENSMUST00000075084 Odf3bQ5M8M2 238 aa11.38□□□□□ -0.59
Trim58-201ENSMUST00000075084 Q8BT88 171 aa11.38□□□□□ -0.59
Trim58-201ENSMUST00000075084 Ube2aQ9Z255 152 aa11.38□□□□□ -0.59
Trim58-201ENSMUST00000075084 Dnah2P0C6F1 4456 aa11.36□□□□□ -0.59
Trim58-201ENSMUST00000075084 Defa21Q8C1P2 93 aa11.36□□□□□ -0.59
Trim58-201ENSMUST00000075084 Gm10570F6VB42 170 aa11.35□□□□□ -0.59
Trim58-201ENSMUST00000075084 Chchd10Q7TNL9 138 aa11.33□□□□□ -0.6
Trim58-201ENSMUST00000075084 UqcrqQ9CQ69 82 aa11.33□□□□□ -0.6
Trim58-201ENSMUST00000075084 Gm27235Q3UW50 83 aa11.33□□□□□ -0.6
Trim58-201ENSMUST00000075084 Prr15lQ8JZM2 100 aa11.33□□□□□ -0.6
Trim58-201ENSMUST00000075084 Igkv3-7A0A0G2JE31 119 aa11.32□□□□□ -0.6
Trim58-201ENSMUST00000075084 Krtap10-4Q08EG8 221 aa11.32□□□□□ -0.6
Trim58-201ENSMUST00000075084 Q8K1L6 76 aa11.32□□□□□ -0.6
Trim58-201ENSMUST00000075084 HrnrQ8VHD8 2496 aa11.32□□□□□ -0.6
Trim58-201ENSMUST00000075084 Smim20D3Z7Q2 69 aa11.31□□□□□ -0.6
Trim58-201ENSMUST00000075084 GhrhP16043 103 aa11.31□□□□□ -0.6
Trim58-201ENSMUST00000075084 Dnah5Q8VHE6 4621 aa11.31□□□□□ -0.6
Trim58-201ENSMUST00000075084 Gm28230A0A0A0MQ91 144 aa11.31□□□□□ -0.6
Trim58-201ENSMUST00000075084 Igkv3-10A0A0G2JGN0 119 aa11.3□□□□□ -0.6
Trim58-201ENSMUST00000075084 Gm10642Q3TWM1 71 aa11.3□□□□□ -0.6
Trim58-201ENSMUST00000075084 Igkv3-5A0A140T8M6 119 aa11.29□□□□□ -0.6
Trim58-201ENSMUST00000075084 Igkv8-19A0A0G2JFN8 121 aa11.28□□□□□ -0.6
Trim58-201ENSMUST00000075084 Gm21886J3QJU9 214 aa11.28□□□□□ -0.6
Trim58-201ENSMUST00000075084 Scgb1b2O35176 93 aa11.28□□□□□ -0.6
Trim58-201ENSMUST00000075084 B230307C23RikQ8BLB2 64 aa11.28□□□□□ -0.6
Trim58-201ENSMUST00000075084 Ryr3A2AGL3 4863 aa11.25□□□□□ -0.61
Trim58-201ENSMUST00000075084 BikO70337 150 aa11.23□□□□□ -0.61
Trim58-201ENSMUST00000075084 Adm2Q7TNK8 150 aa11.23□□□□□ -0.61
Trim58-201ENSMUST00000075084 Pkd1O08852 4293 aa11.22□□□□□ -0.61
Trim58-201ENSMUST00000075084 NbdyA0A0N4SUI7 68 aa11.22□□□□□ -0.61
Trim58-201ENSMUST00000075084 1600014C23RikQ9DAX4 101 aa11.22□□□□□ -0.61
Trim58-201ENSMUST00000075084 Stard9Q80TF6 4561 aa11.19□□□□□ -0.62
Trim58-201ENSMUST00000075084 Reg3aO09037 175 aa11.18□□□□□ -0.62
Trim58-201ENSMUST00000075084 Tmem258P61166 79 aa11.18□□□□□ -0.62
Trim58-201ENSMUST00000075084 Spink8Q09TK9 105 aa11.18□□□□□ -0.62
Trim58-201ENSMUST00000075084 Gpr15lA0A0B4J1N3 78 aa11.17□□□□□ -0.62
Trim58-201ENSMUST00000075084 Gm20604F8WIA3 75 aa11.12□□□□□ -0.63
Trim58-201ENSMUST00000075084 Dync1h1Q9JHU4 4644 aaKnown RBP11.11□□□□□ -0.63
Trim58-201ENSMUST00000075084 Tnp2P11378 117 aa11.11□□□□□ -0.63
Trim58-201ENSMUST00000075084 Gm19935A0A1B0GSF9 52 aa11.1□□□□□ -0.63
Trim58-201ENSMUST00000075084 Rpl37aP61514 92 aa11.1□□□□□ -0.63
Trim58-201ENSMUST00000075084 Wfdc3Q14AE4 130 aa11.1□□□□□ -0.63
Trim58-201ENSMUST00000075084 Samd13D3YUG0 102 aa11.09□□□□□ -0.63
Trim58-201ENSMUST00000075084 Znf706Q9D115 76 aaKnown RBP11.09□□□□□ -0.63
Trim58-201ENSMUST00000075084 Gm28374F6SG70 93 aa11.08□□□□□ -0.64
Trim58-201ENSMUST00000075084 Krtap14O08640 167 aa11.08□□□□□ -0.64
Trim58-201ENSMUST00000075084 Ryr2E9Q401 4966 aaKnown RBP11.07□□□□□ -0.64
Trim58-201ENSMUST00000075084 Fat1A0A1L1SQU7 4645 aa11.07□□□□□ -0.64
Trim58-201ENSMUST00000075084 Anapc11Q9CPX9 84 aa11.06□□□□□ -0.64
Trim58-201ENSMUST00000075084 Gm2696A0A1W2P709 240 aa11.06□□□□□ -0.64
Trim58-201ENSMUST00000075084 Cypt14J3QPF7 87 aa11.06□□□□□ -0.64
Trim58-201ENSMUST00000075084 Defb39Q70KL3 74 aa11.05□□□□□ -0.64
Trim58-201ENSMUST00000075084 ApobE9Q414 4505 aa11.05□□□□□ -0.64
Trim58-201ENSMUST00000075084 Krtap10-10A0A1W2P7T6 217 aa11.03□□□□□ -0.64
Trim58-201ENSMUST00000075084 Ccdc179J3QM76 67 aa11.03□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 73.2 ms