RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Usp34Q6ZQ93 3582 aa5.82□□□□□ -1.48
Ttc28-201ENSMUST00000040111 Ash1lQ99MY8 2958 aa5.81□□□□□ -1.48
Ttc28-201ENSMUST00000040111 Gm26661M0QWV4 156 aa5.8□□□□□ -1.48
Ttc28-201ENSMUST00000040111 Pla2g10Q9QXX3 151 aa5.8□□□□□ -1.48
Ttc28-201ENSMUST00000040111 Gm9507D3Z5T3 223 aa5.79□□□□□ -1.48
Ttc28-201ENSMUST00000040111 A330070K13RikQ8CA53 115 aa5.79□□□□□ -1.48
Ttc28-201ENSMUST00000040111 Smim29Q8R043 75 aa5.79□□□□□ -1.48
Ttc28-201ENSMUST00000040111 MgaA2AWL7 3003 aaKnown RBP5.78□□□□□ -1.48
Ttc28-201ENSMUST00000040111 Fam229bQ8CF36 80 aa5.78□□□□□ -1.48
Ttc28-201ENSMUST00000040111 KalrnA2CG49 2964 aa5.77□□□□□ -1.49
Ttc28-201ENSMUST00000040111 CriptO70333 101 aa5.76□□□□□ -1.49
Ttc28-201ENSMUST00000040111 Myo15bI7HPW8 3033 aa5.76□□□□□ -1.49
Ttc28-201ENSMUST00000040111 Defb9Q8R2I6 67 aa5.76□□□□□ -1.49
Ttc28-201ENSMUST00000040111 Krtap10-4Q08EG8 221 aa5.75□□□□□ -1.49
Ttc28-201ENSMUST00000040111 Dmxl1Q6PNC0 3013 aa5.74□□□□□ -1.49
Ttc28-201ENSMUST00000040111 C530025M09RikF6RGA8 229 aa5.74□□□□□ -1.49
Ttc28-201ENSMUST00000040111 Krtap26-1Q9D7N2 215 aa5.74□□□□□ -1.49
Ttc28-201ENSMUST00000040111 AtmQ62388 3066 aa5.73□□□□□ -1.49
Ttc28-201ENSMUST00000040111 Gm11213A0A1B0GR83 88 aa5.72□□□□□ -1.49
Ttc28-201ENSMUST00000040111 Psors1c2Q80ZC9 134 aa5.72□□□□□ -1.49
Ttc28-201ENSMUST00000040111 Cdh23Q99PF4 3354 aa5.71□□□□□ -1.5
Ttc28-201ENSMUST00000040111 Tex15F8VPN2 2785 aa5.71□□□□□ -1.5
Ttc28-201ENSMUST00000040111 Gm17349F7BGH6 99 aa5.7□□□□□ -1.5
Ttc28-201ENSMUST00000040111 DspE9Q557 2883 aaKnown RBP5.69□□□□□ -1.5
Ttc28-201ENSMUST00000040111 Gm7276Q3TYW4 209 aa5.69□□□□□ -1.5
Ttc28-201ENSMUST00000040111 Krtap10-10A0A1W2P7T6 217 aa5.68□□□□□ -1.5
Ttc28-201ENSMUST00000040111 Rev3lQ61493 3122 aa5.68□□□□□ -1.5
Ttc28-201ENSMUST00000040111 FryE9Q8I9 3020 aa5.68□□□□□ -1.5
Ttc28-201ENSMUST00000040111 ApcQ61315 2845 aa5.68□□□□□ -1.5
Ttc28-201ENSMUST00000040111 Gm3880A0A1B0GSB3 72 aa5.68□□□□□ -1.5
Ttc28-201ENSMUST00000040111 Chtf8P0CG14 533 aa5.68□□□□□ -1.5
Ttc28-201ENSMUST00000040111 Sprr1bQ62267 153 aa5.67□□□□□ -1.5
Ttc28-201ENSMUST00000040111 Cypt15B1AXS0 87 aa5.67□□□□□ -1.5
Ttc28-201ENSMUST00000040111 FrylF8VQ05 3007 aa5.66□□□□□ -1.5
Ttc28-201ENSMUST00000040111 Sprr4Q8CGN8 76 aa5.66□□□□□ -1.5
Ttc28-201ENSMUST00000040111 Gm21798J3QNU5 87 aa5.66□□□□□ -1.5
Ttc28-201ENSMUST00000040111 Hivep1Q03172 2688 aa5.66□□□□□ -1.5
Ttc28-201ENSMUST00000040111 AY074887Q8R5F9 132 aa5.65□□□□□ -1.5
Ttc28-201ENSMUST00000040111 BptfA2A654 3036 aaKnown RBP5.64□□□□□ -1.51
Ttc28-201ENSMUST00000040111 Muc2Q80Z19 2680 aa5.63□□□□□ -1.51
Ttc28-201ENSMUST00000040111 AW011738F6S7Q2 159 aa5.62□□□□□ -1.51
Ttc28-201ENSMUST00000040111 Gm9955Q8CEJ8 102 aa5.62□□□□□ -1.51
Ttc28-201ENSMUST00000040111 CnbpP53996 178 aaKnown RBP5.61□□□□□ -1.51
Ttc28-201ENSMUST00000040111 Celsr1O35161 3034 aa5.59□□□□□ -1.51
Ttc28-201ENSMUST00000040111 2310034C09RikQ9D746 214 aa5.58□□□□□ -1.52
Ttc28-201ENSMUST00000040111 Celsr3Q91ZI0 3301 aa5.57□□□□□ -1.52
Ttc28-201ENSMUST00000040111 OxtP35454 125 aa5.56□□□□□ -1.52
Ttc28-201ENSMUST00000040111 Gm26620Q9CY65 116 aa5.56□□□□□ -1.52
Ttc28-201ENSMUST00000040111 FcgbpE9Q0B5 2583 aa5.54□□□□□ -1.52
Ttc28-201ENSMUST00000040111 Spink7Q6IE32 76 aa5.54□□□□□ -1.52
Ttc28-201ENSMUST00000040111 Frem2Q6NVD0 3160 aa5.53□□□□□ -1.52
Ttc28-201ENSMUST00000040111 Gm10320E9PW43 113 aa5.53□□□□□ -1.52
Ttc28-201ENSMUST00000040111 6030445D17RikE9Q8F9 148 aa5.53□□□□□ -1.52
Ttc28-201ENSMUST00000040111 Igfn1Q3KNY0 2849 aa5.52□□□□□ -1.53
Ttc28-201ENSMUST00000040111 Unc80Q8BLN6 3261 aa5.52□□□□□ -1.53
Ttc28-201ENSMUST00000040111 Srrm2Q8BTI8 2703 aaKnown RBP5.52□□□□□ -1.53
Ttc28-201ENSMUST00000040111 AspmQ8CJ27 3122 aa5.51□□□□□ -1.53
Ttc28-201ENSMUST00000040111 Cystm1Q8K353 104 aa5.51□□□□□ -1.53
Ttc28-201ENSMUST00000040111 Krtap13O88375 197 aa5.51□□□□□ -1.53
Ttc28-201ENSMUST00000040111 Zzef1Q5SSH7 2924 aa5.51□□□□□ -1.53
Ttc28-201ENSMUST00000040111 Lama1P19137 3084 aa5.5□□□□□ -1.53
Ttc28-201ENSMUST00000040111 Zcchc13Q9D548 170 aa5.48□□□□□ -1.53
Ttc28-201ENSMUST00000040111 Gm2696A0A1W2P709 240 aa5.48□□□□□ -1.53
Ttc28-201ENSMUST00000040111 Fam104aA2A6P4 185 aa5.47□□□□□ -1.53
Ttc28-201ENSMUST00000040111 FlncQ8VHX6 2726 aaKnown RBP5.47□□□□□ -1.53
Ttc28-201ENSMUST00000040111 Krtap15-1Q9QZU5 150 aa5.46□□□□□ -1.54
Ttc28-201ENSMUST00000040111 Szt2A2A9C3 3431 aa5.46□□□□□ -1.54
Ttc28-201ENSMUST00000040111 Gm3646F6S692 53 aa5.46□□□□□ -1.54
Ttc28-201ENSMUST00000040111 Dmxl2Q8BPN8 3032 aa5.45□□□□□ -1.54
Ttc28-201ENSMUST00000040111 Gm9821Q8K076 103 aa5.43□□□□□ -1.54
Ttc28-201ENSMUST00000040111 Cypt14J3QPF7 87 aa5.43□□□□□ -1.54
Ttc28-201ENSMUST00000040111 Sec61bQ9CQS8 96 aaKnown RBP5.42□□□□□ -1.54
Ttc28-201ENSMUST00000040111 NbdyA0A0N4SUI7 68 aa5.41□□□□□ -1.54
Ttc28-201ENSMUST00000040111 Gm4491E0CX42 125 aa5.41□□□□□ -1.54
Ttc28-201ENSMUST00000040111 Camk2n1Q6QWF9 78 aa5.4□□□□□ -1.54
Ttc28-201ENSMUST00000040111 NbeaQ9EPN1 2936 aa5.39□□□□□ -1.55
Ttc28-201ENSMUST00000040111 Tenm1Q9WTS4 2731 aa5.38□□□□□ -1.55
Ttc28-201ENSMUST00000040111 Brca2P97929 3329 aa5.38□□□□□ -1.55
Ttc28-201ENSMUST00000040111 Wdfy4E9Q2M9 3149 aa5.37□□□□□ -1.55
Ttc28-201ENSMUST00000040111 TgO08710 2766 aa5.37□□□□□ -1.55
Ttc28-201ENSMUST00000040111 Dchs2A0A0A6YW72 3346 aa5.36□□□□□ -1.55
Ttc28-201ENSMUST00000040111 Lrrc37aB1AWG4 3215 aa5.36□□□□□ -1.55
Ttc28-201ENSMUST00000040111 Nf1Q04690 2841 aa5.36□□□□□ -1.55
Ttc28-201ENSMUST00000040111 Col6a3E9PWQ3 3284 aa5.36□□□□□ -1.55
Ttc28-201ENSMUST00000040111 2310050C09RikG5E8Z3 280 aa5.34□□□□□ -1.56
Ttc28-201ENSMUST00000040111 Gm37013Q8K491 104 aa5.33□□□□□ -1.56
Ttc28-201ENSMUST00000040111 Romo1P60603 79 aa5.32□□□□□ -1.56
Ttc28-201ENSMUST00000040111 Gm10065F6TJM2 114 aa5.32□□□□□ -1.56
Ttc28-201ENSMUST00000040111 Celsr2Q9R0M0 2920 aa5.32□□□□□ -1.56
Ttc28-201ENSMUST00000040111 VcanQ62059 3357 aa5.32□□□□□ -1.56
Ttc28-201ENSMUST00000040111 Odf3bQ5M8M2 238 aa5.31□□□□□ -1.56
Ttc28-201ENSMUST00000040111 DmdP11531 3678 aa5.31□□□□□ -1.56
Ttc28-201ENSMUST00000040111 Adgrg4B7ZCC9 3073 aa5.31□□□□□ -1.56
Ttc28-201ENSMUST00000040111 1700042G07RikB1AUF7 90 aa5.3□□□□□ -1.56
Ttc28-201ENSMUST00000040111 Vps13cQ8BX70 3748 aa5.3□□□□□ -1.56
Ttc28-201ENSMUST00000040111 Trank1Q8BV79 2999 aa5.3□□□□□ -1.56
Ttc28-201ENSMUST00000040111 Chd9Q8BYH8 2885 aa5.29□□□□□ -1.56
Ttc28-201ENSMUST00000040111 Pdzd2E9Q1M1 2796 aa5.29□□□□□ -1.56
Ttc28-201ENSMUST00000040111 Gm10139O88245 57 aa5.29□□□□□ -1.56
Ttc28-201ENSMUST00000040111 Myo15aQ9QZZ4 3511 aa5.28□□□□□ -1.56
Retrieved 100 of 22,080 RNA–protein pairs in 110.5 ms