RNA–Protein interactions for RNA: ENSMUST00000039280.7

Scaf4-201, Transcript of SR-related CTD-associated factor 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Scaf4, Length 4,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4-201ENSMUST00000039280 Sec61gP60060 68 aa9.99□□□□□ -0.81
Scaf4-201ENSMUST00000039280 Sprr4Q8CGN8 76 aa9.99□□□□□ -0.81
Scaf4-201ENSMUST00000039280 C130032M10RikQ8C888 123 aa9.98□□□□□ -0.81
Scaf4-201ENSMUST00000039280 AY074887Q8R5F9 132 aa9.98□□□□□ -0.81
Scaf4-201ENSMUST00000039280 Bean1Q9EQG5 255 aa9.98□□□□□ -0.81
Scaf4-201ENSMUST00000039280 Gm11627A6PWP4 55 aa9.97□□□□□ -0.81
Scaf4-201ENSMUST00000039280 Gm10320E9PW43 113 aa9.96□□□□□ -0.81
Scaf4-201ENSMUST00000039280 Cdc42se1Q8BHL7 80 aa9.96□□□□□ -0.82
Scaf4-201ENSMUST00000039280 Wfdc6bF6ULY1 148 aa9.95□□□□□ -0.82
Scaf4-201ENSMUST00000039280 A330070K13RikQ8CA53 115 aa9.95□□□□□ -0.82
Scaf4-201ENSMUST00000039280 Stab2Q8R4U0 2559 aa9.95□□□□□ -0.82
Scaf4-201ENSMUST00000039280 Gm44790A0A0N4SV91 103 aa9.94□□□□□ -0.82
Scaf4-201ENSMUST00000039280 Phxr5P08399 672 aa9.94□□□□□ -0.82
Scaf4-201ENSMUST00000039280 Pdzd2E9Q1M1 2796 aa9.93□□□□□ -0.82
Scaf4-201ENSMUST00000039280 Fam168bQ80XQ8 194 aa9.93□□□□□ -0.82
Scaf4-201ENSMUST00000039280 AI606181Q8C7B9 129 aa9.92□□□□□ -0.82
Scaf4-201ENSMUST00000039280 Dmac1Q9CQ00 111 aa9.92□□□□□ -0.82
Scaf4-201ENSMUST00000039280 Gm36176A0A1W2P8D5 158 aa9.92□□□□□ -0.82
Scaf4-201ENSMUST00000039280 Gm10267M0QWD8 85 aa9.92□□□□□ -0.82
Scaf4-201ENSMUST00000039280 OtogO55225 2910 aa9.91□□□□□ -0.82
Scaf4-201ENSMUST00000039280 Reg3aO09037 175 aa9.91□□□□□ -0.82
Scaf4-201ENSMUST00000039280 Igkv3-4A0A140T8Q4 119 aa9.9□□□□□ -0.82
Scaf4-201ENSMUST00000039280 Defb38Q7TNV7 63 aa9.9□□□□□ -0.82
Scaf4-201ENSMUST00000039280 1600014C23RikQ9DAX4 101 aa9.9□□□□□ -0.82
Scaf4-201ENSMUST00000039280 Igkv8-19A0A0G2JFN8 121 aa9.9□□□□□ -0.82
Scaf4-201ENSMUST00000039280 Q8K1L6 76 aa9.89□□□□□ -0.83
Scaf4-201ENSMUST00000039280 Gm10837Q3UTT8 145 aa9.89□□□□□ -0.83
Scaf4-201ENSMUST00000039280 Svep1A2AVA0 3567 aa9.88□□□□□ -0.83
Scaf4-201ENSMUST00000039280 Gm28374F6SG70 93 aa9.88□□□□□ -0.83
Scaf4-201ENSMUST00000039280 Gm21886J3QJU9 214 aa9.87□□□□□ -0.83
Scaf4-201ENSMUST00000039280 Adm2Q7TNK8 150 aa9.87□□□□□ -0.83
Scaf4-201ENSMUST00000039280 Q8BT88 171 aa9.86□□□□□ -0.83
Scaf4-201ENSMUST00000039280 Helz2E9QAM5 2947 aaKnown RBP9.86□□□□□ -0.83
Scaf4-201ENSMUST00000039280 Coa5Q99M07 74 aa9.86□□□□□ -0.83
Scaf4-201ENSMUST00000039280 1700018G05RikA0A1B0GSI2 66 aa9.86□□□□□ -0.83
Scaf4-201ENSMUST00000039280 Ndufs5Q99LY9 106 aa9.85□□□□□ -0.83
Scaf4-201ENSMUST00000039280 Gm20604F8WIA3 75 aa9.83□□□□□ -0.84
Scaf4-201ENSMUST00000039280 Phf5aP83870 110 aaKnown RBP9.83□□□□□ -0.84
Scaf4-201ENSMUST00000039280 Ccdc179J3QM76 67 aa9.82□□□□□ -0.84
Scaf4-201ENSMUST00000039280 Ndufb1P0DN34 57 aa9.82□□□□□ -0.84
Scaf4-201ENSMUST00000039280 Gm28230A0A0A0MQ91 144 aa9.82□□□□□ -0.84
Scaf4-201ENSMUST00000039280 Prol1E9PYQ4 312 aa9.82□□□□□ -0.84
Scaf4-201ENSMUST00000039280 Tenm4Q3UHK6 2771 aa9.82□□□□□ -0.84
Scaf4-201ENSMUST00000039280 Defb11Q8R2I7 77 aa9.79□□□□□ -0.84
Scaf4-201ENSMUST00000039280 Igkv3-7A0A0G2JE31 119 aa9.78□□□□□ -0.84
Scaf4-201ENSMUST00000039280 Smim29Q8R043 75 aa9.78□□□□□ -0.84
Scaf4-201ENSMUST00000039280 Gm10642Q3TWM1 71 aa9.78□□□□□ -0.84
Scaf4-201ENSMUST00000039280 Muc4Q8JZM8 3443 aa9.78□□□□□ -0.84
Scaf4-201ENSMUST00000039280 Defb13Q8R2I4 64 aa9.78□□□□□ -0.84
Scaf4-201ENSMUST00000039280 A730071L15RikQ8C4X0 137 aa9.77□□□□□ -0.85
Scaf4-201ENSMUST00000039280 Gm7276Q3TYW4 209 aa9.75□□□□□ -0.85
Scaf4-201ENSMUST00000039280 Srrm2Q8BTI8 2703 aaKnown RBP9.75□□□□□ -0.85
Scaf4-201ENSMUST00000039280 Znf706Q9D115 76 aaKnown RBP9.74□□□□□ -0.85
Scaf4-201ENSMUST00000039280 Igkv3-3A0A140T8Q0 119 aa9.74□□□□□ -0.85
Scaf4-201ENSMUST00000039280 P84750 121 aa9.74□□□□□ -0.85
Scaf4-201ENSMUST00000039280 Phxr4P15974 95 aa9.72□□□□□ -0.85
Scaf4-201ENSMUST00000039280 Gm10160F6Y577 67 aa9.71□□□□□ -0.85
Scaf4-201ENSMUST00000039280 Rpl37aP61514 92 aa9.71□□□□□ -0.85
Scaf4-201ENSMUST00000039280 A930002H24RikQ8C8Y3 163 aa9.69□□□□□ -0.86
Scaf4-201ENSMUST00000039280 Plac8Q9JI48 112 aa9.68□□□□□ -0.86
Scaf4-201ENSMUST00000039280 Cmya5Q70KF4 3739 aa9.67□□□□□ -0.86
Scaf4-201ENSMUST00000039280 Chchd10Q7TNL9 138 aa9.66□□□□□ -0.86
Scaf4-201ENSMUST00000039280 ApcQ61315 2845 aa9.66□□□□□ -0.86
Scaf4-201ENSMUST00000039280 AW011738F6S7Q2 159 aa9.65□□□□□ -0.86
Scaf4-201ENSMUST00000039280 Wfdc3Q14AE4 130 aa9.64□□□□□ -0.87
Scaf4-201ENSMUST00000039280 Gm9508A0A1W2P7W0 230 aa9.64□□□□□ -0.87
Scaf4-201ENSMUST00000039280 Defb39Q70KL3 74 aa9.63□□□□□ -0.87
Scaf4-201ENSMUST00000039280 Defb9Q8R2I6 67 aa9.6□□□□□ -0.87
Scaf4-201ENSMUST00000039280 Gm20661K7N787 53 aa9.59□□□□□ -0.87
Scaf4-201ENSMUST00000039280 Gm27235Q3UW50 83 aa9.58□□□□□ -0.88
Scaf4-201ENSMUST00000039280 Chtf8P0CG14 533 aa9.57□□□□□ -0.88
Scaf4-201ENSMUST00000039280 Gm17349F7BGH6 99 aa9.57□□□□□ -0.88
Scaf4-201ENSMUST00000039280 Fam104aA2A6P4 185 aa9.53□□□□□ -0.88
Scaf4-201ENSMUST00000039280 Zcchc13Q9D548 170 aa9.53□□□□□ -0.88
Scaf4-201ENSMUST00000039280 Sprr1aQ62266 144 aa9.51□□□□□ -0.89
Scaf4-201ENSMUST00000039280 TgO08710 2766 aa9.5□□□□□ -0.89
Scaf4-201ENSMUST00000039280 Gm10643Q3URG9 111 aa9.49□□□□□ -0.89
Scaf4-201ENSMUST00000039280 Anapc11Q9CPX9 84 aa9.48□□□□□ -0.89
Scaf4-201ENSMUST00000039280 Limd2Q8BGB5 128 aa9.46□□□□□ -0.89
Scaf4-201ENSMUST00000039280 Spaca4Q80ZQ0 127 aa9.45□□□□□ -0.9
Scaf4-201ENSMUST00000039280 Fbn1Q61554 2873 aaKnown RBP9.44□□□□□ -0.9
Scaf4-201ENSMUST00000039280 Tenm1Q9WTS4 2731 aa9.44□□□□□ -0.9
Scaf4-201ENSMUST00000039280 Gpr15lA0A0B4J1N3 78 aa9.42□□□□□ -0.9
Scaf4-201ENSMUST00000039280 FcgbpE9Q0B5 2583 aa9.39□□□□□ -0.91
Scaf4-201ENSMUST00000039280 4933415A04RikQ9D443 101 aa9.38□□□□□ -0.91
Scaf4-201ENSMUST00000039280 Gm10065F6TJM2 114 aa9.35□□□□□ -0.91
Scaf4-201ENSMUST00000039280 Gm9507D3Z5T3 223 aa9.33□□□□□ -0.92
Scaf4-201ENSMUST00000039280 RetnlbQ99P86 105 aa9.32□□□□□ -0.92
Scaf4-201ENSMUST00000039280 2310061N02RikQ9D6S9 174 aa9.31□□□□□ -0.92
Scaf4-201ENSMUST00000039280 6030445D17RikE9Q8F9 148 aa9.3□□□□□ -0.92
Scaf4-201ENSMUST00000039280 Csmd2V9GX34 3611 aa9.3□□□□□ -0.92
Scaf4-201ENSMUST00000039280 Gm37013Q8K491 104 aa9.3□□□□□ -0.92
Scaf4-201ENSMUST00000039280 Gm10999F6Q4M4 69 aa9.28□□□□□ -0.92
Scaf4-201ENSMUST00000039280 Gm10139O88245 57 aa9.28□□□□□ -0.92
Scaf4-201ENSMUST00000039280 Uqcr11Q9CPX8 56 aa9.28□□□□□ -0.92
Scaf4-201ENSMUST00000039280 Col7a1Q63870 2944 aa9.28□□□□□ -0.92
Scaf4-201ENSMUST00000039280 NbdyA0A0N4SUI7 68 aa9.27□□□□□ -0.93
Scaf4-201ENSMUST00000039280 Gm3646F6S692 53 aa9.26□□□□□ -0.93
Scaf4-201ENSMUST00000039280 Gm26620Q9CY65 116 aa9.24□□□□□ -0.93
Scaf4-201ENSMUST00000039280 1700042G07RikB1AUF7 90 aa9.22□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 49.3 ms