RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 Col6a5A6H584 2640 aa9.88□□□□□ -0.83
Usp4-201ENSMUST00000035237 Dmac1Q9CQ00 111 aa9.88□□□□□ -0.83
Usp4-201ENSMUST00000035237 Mast4Q811L6 2618 aa9.87□□□□□ -0.83
Usp4-201ENSMUST00000035237 Coa5Q99M07 74 aa9.87□□□□□ -0.83
Usp4-201ENSMUST00000035237 Gm7276Q3TYW4 209 aa9.87□□□□□ -0.83
Usp4-201ENSMUST00000035237 CubnQ9JLB4 3623 aa9.87□□□□□ -0.83
Usp4-201ENSMUST00000035237 Kmt2bO08550 2713 aa9.86□□□□□ -0.83
Usp4-201ENSMUST00000035237 Ube2aQ9Z255 152 aa9.85□□□□□ -0.83
Usp4-201ENSMUST00000035237 Rpl37aP61514 92 aa9.84□□□□□ -0.83
Usp4-201ENSMUST00000035237 FlnbQ80X90 2602 aaKnown RBP9.83□□□□□ -0.84
Usp4-201ENSMUST00000035237 Gm28230A0A0A0MQ91 144 aa9.82□□□□□ -0.84
Usp4-201ENSMUST00000035237 Wfdc6bF6ULY1 148 aa9.81□□□□□ -0.84
Usp4-201ENSMUST00000035237 P84750 121 aa9.8□□□□□ -0.84
Usp4-201ENSMUST00000035237 SptssbQ925E8 76 aa9.79□□□□□ -0.84
Usp4-201ENSMUST00000035237 Hivep1Q03172 2688 aa9.79□□□□□ -0.84
Usp4-201ENSMUST00000035237 Sox16Q62247 57 aa9.78□□□□□ -0.84
Usp4-201ENSMUST00000035237 Igkv3-10A0A0G2JGN0 119 aa9.78□□□□□ -0.84
Usp4-201ENSMUST00000035237 Gm7138L7N2C3 230 aa9.77□□□□□ -0.84
Usp4-201ENSMUST00000035237 A930002H24RikQ8C8Y3 163 aa9.77□□□□□ -0.84
Usp4-201ENSMUST00000035237 Gm3238W4VSP7 230 aa9.77□□□□□ -0.84
Usp4-201ENSMUST00000035237 Gm11627A6PWP4 55 aa9.77□□□□□ -0.85
Usp4-201ENSMUST00000035237 AplnQ9R0R4 77 aa9.76□□□□□ -0.85
Usp4-201ENSMUST00000035237 Sec61gP60060 68 aa9.75□□□□□ -0.85
Usp4-201ENSMUST00000035237 SycnQ8VCK7 134 aa9.74□□□□□ -0.85
Usp4-201ENSMUST00000035237 Igkv3-5A0A140T8M6 119 aa9.73□□□□□ -0.85
Usp4-201ENSMUST00000035237 Igkv3-7A0A0G2JE31 119 aa9.72□□□□□ -0.85
Usp4-201ENSMUST00000035237 Xirp2Q4U4S6 3784 aa9.69□□□□□ -0.86
Usp4-201ENSMUST00000035237 Wfdc10Q3V2J9 124 aa9.69□□□□□ -0.86
Usp4-201ENSMUST00000035237 Prol1E9PYQ4 312 aa9.68□□□□□ -0.86
Usp4-201ENSMUST00000035237 Gm16181B0V2H2 73 aa9.67□□□□□ -0.86
Usp4-201ENSMUST00000035237 Phxr4P15974 95 aa9.66□□□□□ -0.86
Usp4-201ENSMUST00000035237 Itpr2Q9Z329 2701 aa9.65□□□□□ -0.86
Usp4-201ENSMUST00000035237 FasnP19096 2504 aaKnown RBP9.65□□□□□ -0.87
Usp4-201ENSMUST00000035237 Chtf8P0CG14 533 aa9.64□□□□□ -0.87
Usp4-201ENSMUST00000035237 Zcchc13Q9D548 170 aa9.64□□□□□ -0.87
Usp4-201ENSMUST00000035237 TgO08710 2766 aa9.64□□□□□ -0.87
Usp4-201ENSMUST00000035237 1700012A03RikQ9DAF1 130 aa9.64□□□□□ -0.87
Usp4-201ENSMUST00000035237 Gm10160F6Y577 67 aa9.62□□□□□ -0.87
Usp4-201ENSMUST00000035237 Gm7137J3QMW1 236 aa9.62□□□□□ -0.87
Usp4-201ENSMUST00000035237 Phf5aP83870 110 aaKnown RBP9.61□□□□□ -0.87
Usp4-201ENSMUST00000035237 Gm20604F8WIA3 75 aa9.59□□□□□ -0.87
Usp4-201ENSMUST00000035237 Chchd10Q7TNL9 138 aa9.58□□□□□ -0.88
Usp4-201ENSMUST00000035237 U90926O08546 118 aa9.58□□□□□ -0.88
Usp4-201ENSMUST00000035237 Ndufs5Q99LY9 106 aa9.58□□□□□ -0.88
Usp4-201ENSMUST00000035237 Tenm1Q9WTS4 2731 aa9.56□□□□□ -0.88
Usp4-201ENSMUST00000035237 Phxr5P08399 672 aa9.55□□□□□ -0.88
Usp4-201ENSMUST00000035237 Stab2Q8R4U0 2559 aa9.53□□□□□ -0.88
Usp4-201ENSMUST00000035237 Sprr1aQ62266 144 aa9.53□□□□□ -0.88
Usp4-201ENSMUST00000035237 Gm20661K7N787 53 aa9.53□□□□□ -0.88
Usp4-201ENSMUST00000035237 Srrm2Q8BTI8 2703 aaKnown RBP9.53□□□□□ -0.88
Usp4-201ENSMUST00000035237 Fam104aA2A6P4 185 aa9.52□□□□□ -0.89
Usp4-201ENSMUST00000035237 Gm10837Q3UTT8 145 aa9.52□□□□□ -0.89
Usp4-201ENSMUST00000035237 Igkv3-3A0A140T8Q0 119 aa9.51□□□□□ -0.89
Usp4-201ENSMUST00000035237 Ndufb1P0DN34 57 aa9.51□□□□□ -0.89
Usp4-201ENSMUST00000035237 Nupr2Q497P3 102 aa9.5□□□□□ -0.89
Usp4-201ENSMUST00000035237 Defb13Q8R2I4 64 aa9.5□□□□□ -0.89
Usp4-201ENSMUST00000035237 Gm10642Q3TWM1 71 aa9.49□□□□□ -0.89
Usp4-201ENSMUST00000035237 Gm37013Q8K491 104 aa9.48□□□□□ -0.89
Usp4-201ENSMUST00000035237 Spata3Q9D9T6 193 aa9.47□□□□□ -0.89
Usp4-201ENSMUST00000035237 Odf3bQ5M8M2 238 aa9.47□□□□□ -0.89
Usp4-201ENSMUST00000035237 4933415A04RikQ9D443 101 aa9.46□□□□□ -0.89
Usp4-201ENSMUST00000035237 Pkd1l1Q8R526 2615 aa9.46□□□□□ -0.9
Usp4-201ENSMUST00000035237 BsnO88737 3942 aa9.46□□□□□ -0.9
Usp4-201ENSMUST00000035237 Igsf10Q3V1M1 2594 aa9.44□□□□□ -0.9
Usp4-201ENSMUST00000035237 Gm4707V9GXN5 68 aa9.43□□□□□ -0.9
Usp4-201ENSMUST00000035237 Fbn1Q61554 2873 aaKnown RBP9.43□□□□□ -0.9
Usp4-201ENSMUST00000035237 Col7a1Q63870 2944 aa9.42□□□□□ -0.9
Usp4-201ENSMUST00000035237 Gm9508A0A1W2P7W0 230 aa9.41□□□□□ -0.9
Usp4-201ENSMUST00000035237 Gm36176A0A1W2P8D5 158 aa9.4□□□□□ -0.9
Usp4-201ENSMUST00000035237 Gm10139O88245 57 aa9.38□□□□□ -0.91
Usp4-201ENSMUST00000035237 Wfdc3Q14AE4 130 aa9.38□□□□□ -0.91
Usp4-201ENSMUST00000035237 Defb9Q8R2I6 67 aa9.38□□□□□ -0.91
Usp4-201ENSMUST00000035237 Ank2Q8C8R3 3898 aa9.37□□□□□ -0.91
Usp4-201ENSMUST00000035237 Q8K1L6 76 aa9.37□□□□□ -0.91
Usp4-201ENSMUST00000035237 Anapc11Q9CPX9 84 aa9.37□□□□□ -0.91
Usp4-201ENSMUST00000035237 Tenm4Q3UHK6 2771 aa9.36□□□□□ -0.91
Usp4-201ENSMUST00000035237 Adm2Q7TNK8 150 aa9.36□□□□□ -0.91
Usp4-201ENSMUST00000035237 VwfQ8CIZ8 2813 aa9.36□□□□□ -0.91
Usp4-201ENSMUST00000035237 Hspg2Q05793 3707 aaKnown RBP9.35□□□□□ -0.91
Usp4-201ENSMUST00000035237 9530053A07RikE9PVG8 2581 aa9.34□□□□□ -0.91
Usp4-201ENSMUST00000035237 Gm27235Q3UW50 83 aa9.34□□□□□ -0.91
Usp4-201ENSMUST00000035237 1600014C23RikQ9DAX4 101 aa9.3□□□□□ -0.92
Usp4-201ENSMUST00000035237 Defb39Q70KL3 74 aa9.29□□□□□ -0.92
Usp4-201ENSMUST00000035237 Plac8Q9JI48 112 aa9.28□□□□□ -0.92
Usp4-201ENSMUST00000035237 Gm3646F6S692 53 aa9.27□□□□□ -0.92
Usp4-201ENSMUST00000035237 Gm2310J3QNJ2 377 aa9.25□□□□□ -0.93
Usp4-201ENSMUST00000035237 Gm10643Q3URG9 111 aa9.24□□□□□ -0.93
Usp4-201ENSMUST00000035237 Znf706Q9D115 76 aaKnown RBP9.24□□□□□ -0.93
Usp4-201ENSMUST00000035237 Gm10999F6Q4M4 69 aa9.23□□□□□ -0.93
Usp4-201ENSMUST00000035237 6030445D17RikE9Q8F9 148 aa9.23□□□□□ -0.93
Usp4-201ENSMUST00000035237 Limd2Q8BGB5 128 aa9.22□□□□□ -0.93
Usp4-201ENSMUST00000035237 Gm26620Q9CY65 116 aa9.21□□□□□ -0.93
Usp4-201ENSMUST00000035237 Gm21798J3QNU5 87 aa9.21□□□□□ -0.94
Usp4-201ENSMUST00000035237 1700042G07RikB1AUF7 90 aa9.2□□□□□ -0.94
Usp4-201ENSMUST00000035237 Defb1P56386 69 aa9.2□□□□□ -0.94
Usp4-201ENSMUST00000035237 Wfdc17Q5SSJ1 76 aa9.19□□□□□ -0.94
Usp4-201ENSMUST00000035237 Spaca4Q80ZQ0 127 aa9.16□□□□□ -0.94
Usp4-201ENSMUST00000035237 Ccdc179J3QM76 67 aa9.15□□□□□ -0.94
Usp4-201ENSMUST00000035237 Uqcr11Q9CPX8 56 aa9.13□□□□□ -0.95
Usp4-201ENSMUST00000035237 2310061N02RikQ9D6S9 174 aa9.1□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 52 ms