RNA–Protein interactions for RNA: ENSMUST00000025989.8

Tm9sf3-201, Transcript of Transmembrane 9 superfamily member 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tm9sf3, Length 6,144 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tm9sf3-201ENSMUST00000025989 Rev3lQ61493 3122 aa12.74□□□□□ -0.37
Tm9sf3-201ENSMUST00000025989 NipblQ6KCD5 2798 aaKnown RBP12.74□□□□□ -0.37
Tm9sf3-201ENSMUST00000025989 Map1aQ9QYR6 2776 aa12.73□□□□□ -0.37
Tm9sf3-201ENSMUST00000025989 Gm9821Q8K076 103 aa12.73□□□□□ -0.37
Tm9sf3-201ENSMUST00000025989 Fbn2Q61555 2907 aa12.72□□□□□ -0.37
Tm9sf3-201ENSMUST00000025989 Gm10065F6TJM2 114 aa12.71□□□□□ -0.38
Tm9sf3-201ENSMUST00000025989 Dmxl1Q6PNC0 3013 aa12.7□□□□□ -0.38
Tm9sf3-201ENSMUST00000025989 Chd6A3KFM7 2711 aa12.69□□□□□ -0.38
Tm9sf3-201ENSMUST00000025989 Gm9508A0A1W2P7W0 230 aa12.66□□□□□ -0.38
Tm9sf3-201ENSMUST00000025989 KalrnA2CG49 2964 aa12.66□□□□□ -0.38
Tm9sf3-201ENSMUST00000025989 Cypt14J3QPF7 87 aa12.65□□□□□ -0.38
Tm9sf3-201ENSMUST00000025989 9530053A07RikE9PVG8 2581 aa12.65□□□□□ -0.38
Tm9sf3-201ENSMUST00000025989 Ash1lQ99MY8 2958 aa12.65□□□□□ -0.39
Tm9sf3-201ENSMUST00000025989 Kmt2bO08550 2713 aa12.61□□□□□ -0.39
Tm9sf3-201ENSMUST00000025989 Nbeal2Q6ZQA0 2742 aa12.6□□□□□ -0.39
Tm9sf3-201ENSMUST00000025989 Cdc42se1Q8BHL7 80 aa12.58□□□□□ -0.4
Tm9sf3-201ENSMUST00000025989 Mp68P56379 58 aa12.55□□□□□ -0.4
Tm9sf3-201ENSMUST00000025989 Rps28P62858 69 aaKnown RBP12.55□□□□□ -0.4
Tm9sf3-201ENSMUST00000025989 Chtf8P0CG14 533 aa12.52□□□□□ -0.41
Tm9sf3-201ENSMUST00000025989 2310034C09RikQ9D746 214 aa12.52□□□□□ -0.41
Tm9sf3-201ENSMUST00000025989 Pkd1l1Q8R526 2615 aa12.5□□□□□ -0.41
Tm9sf3-201ENSMUST00000025989 Tep1P97499 2629 aa12.48□□□□□ -0.41
Tm9sf3-201ENSMUST00000025989 Phxr4P15974 95 aa12.48□□□□□ -0.41
Tm9sf3-201ENSMUST00000025989 Uqcr11Q9CPX8 56 aa12.46□□□□□ -0.42
Tm9sf3-201ENSMUST00000025989 Muc2Q80Z19 2680 aa12.46□□□□□ -0.42
Tm9sf3-201ENSMUST00000025989 Col6a5A6H584 2640 aa12.45□□□□□ -0.42
Tm9sf3-201ENSMUST00000025989 Prr13Q9CQJ5 137 aa12.42□□□□□ -0.42
Tm9sf3-201ENSMUST00000025989 Krtap15-1Q9QZU5 150 aa12.42□□□□□ -0.42
Tm9sf3-201ENSMUST00000025989 Pla2g10Q9QXX3 151 aa12.42□□□□□ -0.42
Tm9sf3-201ENSMUST00000025989 Fam229bQ8CF36 80 aa12.41□□□□□ -0.42
Tm9sf3-201ENSMUST00000025989 6030445D17RikE9Q8F9 148 aa12.4□□□□□ -0.42
Tm9sf3-201ENSMUST00000025989 Gm10320E9PW43 113 aa12.39□□□□□ -0.43
Tm9sf3-201ENSMUST00000025989 Cdh23Q99PF4 3354 aa12.39□□□□□ -0.43
Tm9sf3-201ENSMUST00000025989 AtmQ62388 3066 aa12.38□□□□□ -0.43
Tm9sf3-201ENSMUST00000025989 Spink7Q6IE32 76 aa12.38□□□□□ -0.43
Tm9sf3-201ENSMUST00000025989 Gm21798J3QNU5 87 aa12.36□□□□□ -0.43
Tm9sf3-201ENSMUST00000025989 Stab2Q8R4U0 2559 aa12.36□□□□□ -0.43
Tm9sf3-201ENSMUST00000025989 Odf3bQ5M8M2 238 aa12.35□□□□□ -0.43
Tm9sf3-201ENSMUST00000025989 Gm4491E0CX42 125 aa12.34□□□□□ -0.43
Tm9sf3-201ENSMUST00000025989 Sprr1aQ62266 144 aa12.33□□□□□ -0.44
Tm9sf3-201ENSMUST00000025989 Gm9507D3Z5T3 223 aa12.32□□□□□ -0.44
Tm9sf3-201ENSMUST00000025989 Ranbp2Q9ERU9 3053 aaKnown RBP12.31□□□□□ -0.44
Tm9sf3-201ENSMUST00000025989 Hivep1Q03172 2688 aa12.3□□□□□ -0.44
Tm9sf3-201ENSMUST00000025989 Cfap54Q8C6S9 3106 aa12.29□□□□□ -0.44
Tm9sf3-201ENSMUST00000025989 Gm10139O88245 57 aa12.29□□□□□ -0.44
Tm9sf3-201ENSMUST00000025989 AspmQ8CJ27 3122 aa12.27□□□□□ -0.44
Tm9sf3-201ENSMUST00000025989 Krtap13O88375 197 aa12.23□□□□□ -0.45
Tm9sf3-201ENSMUST00000025989 Vps13aQ5H8C4 3166 aa12.2□□□□□ -0.46
Tm9sf3-201ENSMUST00000025989 Gm20538F6Z9R1 75 aa12.18□□□□□ -0.46
Tm9sf3-201ENSMUST00000025989 Celsr1O35161 3034 aa12.16□□□□□ -0.46
Tm9sf3-201ENSMUST00000025989 Fam229aB2KGE5 128 aa12.16□□□□□ -0.46
Tm9sf3-201ENSMUST00000025989 Krtap10-4Q08EG8 221 aa12.14□□□□□ -0.47
Tm9sf3-201ENSMUST00000025989 2310050C09RikG5E8Z3 280 aa12.1□□□□□ -0.47
Tm9sf3-201ENSMUST00000025989 Gm10643Q3URG9 111 aa12.1□□□□□ -0.47
Tm9sf3-201ENSMUST00000025989 Krtap29-1A2A5X4 342 aa12.09□□□□□ -0.47
Tm9sf3-201ENSMUST00000025989 Gm9955Q8CEJ8 102 aa12.09□□□□□ -0.47
Tm9sf3-201ENSMUST00000025989 Sec61bQ9CQS8 96 aaKnown RBP12.07□□□□□ -0.48
Tm9sf3-201ENSMUST00000025989 Lrrc37aB1AWG4 3215 aa12.06□□□□□ -0.48
Tm9sf3-201ENSMUST00000025989 Gm3880A0A1B0GSB3 72 aa12.06□□□□□ -0.48
Tm9sf3-201ENSMUST00000025989 Gm16253D3Z167 63 aa12.05□□□□□ -0.48
Tm9sf3-201ENSMUST00000025989 Itpr2Q9Z329 2701 aa12.05□□□□□ -0.48
Tm9sf3-201ENSMUST00000025989 BptfA2A654 3036 aaKnown RBP12.05□□□□□ -0.48
Tm9sf3-201ENSMUST00000025989 CriptO70333 101 aa12.05□□□□□ -0.48
Tm9sf3-201ENSMUST00000025989 Szt2A2A9C3 3431 aa12.04□□□□□ -0.48
Tm9sf3-201ENSMUST00000025989 FryE9Q8I9 3020 aa12.02□□□□□ -0.49
Tm9sf3-201ENSMUST00000025989 Igfn1Q3KNY0 2849 aa12.01□□□□□ -0.49
Tm9sf3-201ENSMUST00000025989 Krtap10-10A0A1W2P7T6 217 aa11.97□□□□□ -0.49
Tm9sf3-201ENSMUST00000025989 Tex15F8VPN2 2785 aa11.97□□□□□ -0.49
Tm9sf3-201ENSMUST00000025989 Gm5767A0A0J9YTU8 78 aa11.97□□□□□ -0.49
Tm9sf3-201ENSMUST00000025989 Unc80Q8BLN6 3261 aa11.96□□□□□ -0.49
Tm9sf3-201ENSMUST00000025989 FcgbpE9Q0B5 2583 aa11.91□□□□□ -0.5
Tm9sf3-201ENSMUST00000025989 Utp20Q5XG71 2788 aaKnown RBP11.88□□□□□ -0.51
Tm9sf3-201ENSMUST00000025989 A730071L15RikQ8C4X0 137 aa11.87□□□□□ -0.51
Tm9sf3-201ENSMUST00000025989 NbeaQ9EPN1 2936 aa11.86□□□□□ -0.51
Tm9sf3-201ENSMUST00000025989 Gm37013Q8K491 104 aa11.86□□□□□ -0.51
Tm9sf3-201ENSMUST00000025989 2310061N02RikQ9D6S9 174 aa11.85□□□□□ -0.51
Tm9sf3-201ENSMUST00000025989 Cystm1Q8K353 104 aa11.82□□□□□ -0.52
Tm9sf3-201ENSMUST00000025989 Tenm4Q3UHK6 2771 aa11.81□□□□□ -0.52
Tm9sf3-201ENSMUST00000025989 Krtap14O08640 167 aa11.8□□□□□ -0.52
Tm9sf3-201ENSMUST00000025989 Dmxl2Q8BPN8 3032 aa11.8□□□□□ -0.52
Tm9sf3-201ENSMUST00000025989 Frem2Q6NVD0 3160 aa11.79□□□□□ -0.52
Tm9sf3-201ENSMUST00000025989 Camk2n1Q6QWF9 78 aa11.78□□□□□ -0.52
Tm9sf3-201ENSMUST00000025989 Lama1P19137 3084 aa11.75□□□□□ -0.53
Tm9sf3-201ENSMUST00000025989 Adgrg4B7ZCC9 3073 aa11.74□□□□□ -0.53
Tm9sf3-201ENSMUST00000025989 FrylF8VQ05 3007 aa11.71□□□□□ -0.53
Tm9sf3-201ENSMUST00000025989 Dchs2A0A0A6YW72 3346 aa11.71□□□□□ -0.53
Tm9sf3-201ENSMUST00000025989 Celsr3Q91ZI0 3301 aa11.71□□□□□ -0.54
Tm9sf3-201ENSMUST00000025989 Gm19426M0QWC7 77 aa11.7□□□□□ -0.54
Tm9sf3-201ENSMUST00000025989 Wdfy4E9Q2M9 3149 aa11.7□□□□□ -0.54
Tm9sf3-201ENSMUST00000025989 Gm2696A0A1W2P709 240 aa11.68□□□□□ -0.54
Tm9sf3-201ENSMUST00000025989 Tnp2P11378 117 aa11.64□□□□□ -0.55
Tm9sf3-201ENSMUST00000025989 FlncQ8VHX6 2726 aaKnown RBP11.64□□□□□ -0.55
Tm9sf3-201ENSMUST00000025989 DspE9Q557 2883 aaKnown RBP11.61□□□□□ -0.55
Tm9sf3-201ENSMUST00000025989 Brca2P97929 3329 aa11.61□□□□□ -0.55
Tm9sf3-201ENSMUST00000025989 BC029722A0A0N4SW31 51 aa11.59□□□□□ -0.55
Tm9sf3-201ENSMUST00000025989 Zzef1Q5SSH7 2924 aa11.59□□□□□ -0.55
Tm9sf3-201ENSMUST00000025989 Col6a3E9PWQ3 3284 aa11.55□□□□□ -0.56
Tm9sf3-201ENSMUST00000025989 Srrm2Q8BTI8 2703 aaKnown RBP11.47□□□□□ -0.57
Tm9sf3-201ENSMUST00000025989 Celsr2Q9R0M0 2920 aa11.45□□□□□ -0.58
Tm9sf3-201ENSMUST00000025989 Rpl37Q9D823 97 aa11.44□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 94 ms