RNA–Protein interactions for RNA: ENSMUST00000025989.8

Tm9sf3-201, Transcript of Transmembrane 9 superfamily member 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tm9sf3, Length 6,144 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tm9sf3-201ENSMUST00000025989 Rhox8Q6VSS7 320 aa36.56■■■■□ 3.44
Tm9sf3-201ENSMUST00000025989 Ccdc136Q3TVA9 1136 aa32.53■■■□□ 2.8
Tm9sf3-201ENSMUST00000025989 Esf1Q3V1V3 845 aaKnown RBP32.5■■■□□ 2.79
Tm9sf3-201ENSMUST00000025989 Cngb1E1AZ71 1325 aa32.28■■■□□ 2.76
Tm9sf3-201ENSMUST00000025989 Ehmt2Q9Z148 1263 aaKnown RBP32.24■■■□□ 2.75
Tm9sf3-201ENSMUST00000025989 Zeb1Q64318 1117 aa31.88■■■□□ 2.69
Tm9sf3-201ENSMUST00000025989 NischQ80TM9 1593 aa31.76■■■□□ 2.67
Tm9sf3-201ENSMUST00000025989 Gab3Q8BSM5 595 aa31.74■■■□□ 2.67
Tm9sf3-201ENSMUST00000025989 Ube2uB1AUC4 352 aa31.65■■■□□ 2.66
Tm9sf3-201ENSMUST00000025989 Trim41Q5NCC3 630 aa31.61■■■□□ 2.65
Tm9sf3-201ENSMUST00000025989 Npm2Q80W85 207 aa31.61■■■□□ 2.65
Tm9sf3-201ENSMUST00000025989 Rpgrip1Q9EPQ2 1331 aa31.38■■■□□ 2.61
Tm9sf3-201ENSMUST00000025989 Myt1lP97500 1187 aa31.33■■■□□ 2.61
Tm9sf3-201ENSMUST00000025989 Wdr66E9Q743 1299 aa31.14■■■□□ 2.58
Tm9sf3-201ENSMUST00000025989 Las1lA2BE28 776 aaKnown RBP31.06■■■□□ 2.56
Tm9sf3-201ENSMUST00000025989 Il27Q8K3I6 234 aa30.67■■■□□ 2.5
Tm9sf3-201ENSMUST00000025989 Abcc9P70170 1546 aa30.47■■■□□ 2.47
Tm9sf3-201ENSMUST00000025989 UbtfP25976 765 aaKnown RBP30.33■■■□□ 2.45
Tm9sf3-201ENSMUST00000025989 Gm35339A0A140LHH9 1649 aa30.17■■■□□ 2.42
Tm9sf3-201ENSMUST00000025989 Zcchc6Q5BLK4 1491 aaKnown RBP30.04■■■□□ 2.4
Tm9sf3-201ENSMUST00000025989 Ap3b1Q9Z1T1 1105 aa29.85■■■□□ 2.37
Tm9sf3-201ENSMUST00000025989 Pelp1Q9DBD5 1123 aaKnown RBP29.71■■■□□ 2.35
Tm9sf3-201ENSMUST00000025989 Slc24a1Q91WD8 1130 aa29.68■■■□□ 2.34
Tm9sf3-201ENSMUST00000025989 NefmP08553 848 aa29.62■■■□□ 2.33
Tm9sf3-201ENSMUST00000025989 Fam50aQ9WV03 339 aaKnown RBP29.61■■■□□ 2.33
Tm9sf3-201ENSMUST00000025989 HrcG5E8J6 738 aa29.51■■■□□ 2.32
Tm9sf3-201ENSMUST00000025989 Neurod1Q60867 357 aa29.45■■■□□ 2.31
Tm9sf3-201ENSMUST00000025989 Acin1Q9JIX8 1338 aaKnown RBP29.42■■■□□ 2.3
Tm9sf3-201ENSMUST00000025989 Npm1Q61937 292 aaKnown RBP29.36■■■□□ 2.29
Tm9sf3-201ENSMUST00000025989 Os9Q8K2C7 672 aa29.36■■■□□ 2.29
Tm9sf3-201ENSMUST00000025989 Ccdc180J3QNE4 1664 aa29.31■■■□□ 2.28
Tm9sf3-201ENSMUST00000025989 Stra8P70278 393 aa29.22■■■□□ 2.27
Tm9sf3-201ENSMUST00000025989 Ifnlr1Q8CGK5 535 aa29.16■■■□□ 2.26
Tm9sf3-201ENSMUST00000025989 Zbtb7cQ8VCZ7 619 aa29.11■■■□□ 2.25
Tm9sf3-201ENSMUST00000025989 NclP09405 707 aaKnown RBP29.08■■■□□ 2.25
Tm9sf3-201ENSMUST00000025989 Lmod2Q3UHZ5 550 aa29■■■□□ 2.23
Tm9sf3-201ENSMUST00000025989 Anp32bQ9EST5 272 aaKnown RBP28.97■■■□□ 2.23
Tm9sf3-201ENSMUST00000025989 NrdcQ8BHG1 1161 aa28.9■■■□□ 2.22
Tm9sf3-201ENSMUST00000025989 Gm13697A2AK42 830 aa28.87■■■□□ 2.21
Tm9sf3-201ENSMUST00000025989 Hnrnpul2Q00PI9 745 aaKnown RBP28.87■■■□□ 2.21
Tm9sf3-201ENSMUST00000025989 Ppargc1bQ8VHJ7 1014 aa28.85■■■□□ 2.21
Tm9sf3-201ENSMUST00000025989 Abcc8B2RUS7 1588 aa28.84■■■□□ 2.21
Tm9sf3-201ENSMUST00000025989 Rtl1Q7M732 1744 aa28.82■■■□□ 2.2
Tm9sf3-201ENSMUST00000025989 Fkbp15Q6P9Q6 1216 aaKnown RBP28.71■■■□□ 2.19
Tm9sf3-201ENSMUST00000025989 CenpbP27790 599 aa28.7■■■□□ 2.19
Tm9sf3-201ENSMUST00000025989 Plekhg3Q4VAC9 1341 aa28.69■■■□□ 2.18
Tm9sf3-201ENSMUST00000025989 Cdk11bP24788 784 aaKnown RBP28.64■■■□□ 2.18
Tm9sf3-201ENSMUST00000025989 Plppr3Q7TPB0 716 aa28.62■■■□□ 2.17
Tm9sf3-201ENSMUST00000025989 Eif5bQ05D44 1216 aaKnown RBP28.61■■■□□ 2.17
Tm9sf3-201ENSMUST00000025989 TonslQ6NZL6 1363 aa28.56■■■□□ 2.16
Tm9sf3-201ENSMUST00000025989 Ubl4bQ9CQ84 188 aa28.56■■■□□ 2.16
Tm9sf3-201ENSMUST00000025989 Erich6D3Z6S9 713 aa28.51■■■□□ 2.15
Tm9sf3-201ENSMUST00000025989 Chic1Q8CBW7 227 aa28.51■■■□□ 2.15
Tm9sf3-201ENSMUST00000025989 Atp1b4Q99ME6 356 aa28.48■■■□□ 2.15
Tm9sf3-201ENSMUST00000025989 Zbtb4Q5F293 982 aa28.45■■■□□ 2.15
Tm9sf3-201ENSMUST00000025989 NeflP08551 543 aa28.44■■■□□ 2.14
Tm9sf3-201ENSMUST00000025989 Amer1Q7TS75 1132 aa28.44■■■□□ 2.14
Tm9sf3-201ENSMUST00000025989 Ttbk1Q6PCN3 1308 aa28.43■■■□□ 2.14
Tm9sf3-201ENSMUST00000025989 Mier1Q5UAK0 511 aa28.43■■■□□ 2.14
Tm9sf3-201ENSMUST00000025989 Nop58Q6DFW4 536 aaKnown RBP28.37■■■□□ 2.13
Tm9sf3-201ENSMUST00000025989 Brd4Q9ESU6 1400 aaKnown RBP28.33■■■□□ 2.13
Tm9sf3-201ENSMUST00000025989 Gm13695A2AK44 830 aa28.31■■■□□ 2.12
Tm9sf3-201ENSMUST00000025989 Prdm10Q3UTQ7 1184 aa28.22■■■□□ 2.11
Tm9sf3-201ENSMUST00000025989 Pcgf6Q99NA9 353 aa28.17■■■□□ 2.1
Tm9sf3-201ENSMUST00000025989 Tnnt3Q9QZ47 272 aa28.1■■■□□ 2.09
Tm9sf3-201ENSMUST00000025989 Clip1Q922J3 1391 aa28.05■■■□□ 2.08
Tm9sf3-201ENSMUST00000025989 Eid3Q3V124 375 aa28.04■■■□□ 2.08
Tm9sf3-201ENSMUST00000025989 Supt5hO55201 1082 aaKnown RBP27.98■■■□□ 2.07
Tm9sf3-201ENSMUST00000025989 Rb1cc1Q9ESK9 1588 aa27.97■■■□□ 2.07
Tm9sf3-201ENSMUST00000025989 Nlrp6Q91WS2 869 aa27.94■■■□□ 2.06
Tm9sf3-201ENSMUST00000025989 Mapk8ip2Q9ERE9 830 aa27.9■■■□□ 2.06
Tm9sf3-201ENSMUST00000025989 Safb2Q80YR5 991 aaKnown RBP27.83■■■□□ 2.04
Tm9sf3-201ENSMUST00000025989 Hdac5Q9Z2V6 1113 aa27.82■■■□□ 2.04
Tm9sf3-201ENSMUST00000025989 Chic2Q9D9G3 165 aa27.82■■■□□ 2.04
Tm9sf3-201ENSMUST00000025989 4933416C03RikQ3V063 378 aa27.8■■■□□ 2.04
Tm9sf3-201ENSMUST00000025989 Polr3glQ8R0C0 218 aa27.75■■■□□ 2.03
Tm9sf3-201ENSMUST00000025989 NacadQ5SWP3 1504 aa27.69■■■□□ 2.02
Tm9sf3-201ENSMUST00000025989 Dcaf1Q80TR8 1506 aa27.65■■■□□ 2.02
Tm9sf3-201ENSMUST00000025989 Cep164Q5DU05 1446 aa27.62■■■□□ 2.01
Tm9sf3-201ENSMUST00000025989 ClspnQ80YR7 1315 aa27.6■■■□□ 2.01
Tm9sf3-201ENSMUST00000025989 Kif15Q6P9L6 1387 aa27.6■■■□□ 2.01
Tm9sf3-201ENSMUST00000025989 BlmO88700 1416 aa27.57■■■□□ 2
Tm9sf3-201ENSMUST00000025989 P3h3Q8CG70 732 aa27.53■■■□□ 2
Tm9sf3-201ENSMUST00000025989 Ccer2J3QPU5 274 aa27.5■■□□□ 1.99
Tm9sf3-201ENSMUST00000025989 Rsf1E9PWW9 1441 aaKnown RBP27.47■■□□□ 1.99
Tm9sf3-201ENSMUST00000025989 Ercc6F8VPZ5 1481 aa27.46■■□□□ 1.99
Tm9sf3-201ENSMUST00000025989 DiexfQ8BTT6 772 aaKnown RBP27.44■■□□□ 1.98
Tm9sf3-201ENSMUST00000025989 Clstn2Q9ER65 966 aa27.44■■□□□ 1.98
Tm9sf3-201ENSMUST00000025989 Rangap1P46061 589 aaKnown RBP27.44■■□□□ 1.98
Tm9sf3-201ENSMUST00000025989 Arhgap27A2AB59 869 aa27.4■■□□□ 1.98
Tm9sf3-201ENSMUST00000025989 Setd5Q5XJV7 1441 aa27.39■■□□□ 1.98
Tm9sf3-201ENSMUST00000025989 4930567H17RikQ3V0K5 233 aa27.28■■□□□ 1.96
Tm9sf3-201ENSMUST00000025989 Ccdc18Q640L5 1455 aa27.23■■□□□ 1.95
Tm9sf3-201ENSMUST00000025989 Csrnp3P59055 597 aa27.19■■□□□ 1.94
Tm9sf3-201ENSMUST00000025989 Rad21Q61550 635 aaKnown RBP27.18■■□□□ 1.94
Tm9sf3-201ENSMUST00000025989 Rgl3Q3UYI5 709 aa27.17■■□□□ 1.94
Tm9sf3-201ENSMUST00000025989 Baz1aO88379 1555 aa27.17■■□□□ 1.94
Tm9sf3-201ENSMUST00000025989 ArxO35085 564 aa27.15■■□□□ 1.94
Tm9sf3-201ENSMUST00000025989 MyclP10166 368 aa27.12■■□□□ 1.93
Tm9sf3-201ENSMUST00000025989 Golga3P55937 1487 aa27.12■■□□□ 1.93
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms