RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Gm10642Q3TWM1 71 aa3.02□□□□□ -1.93
Prkdc-201ENSMUST00000023352 Mki67E9PVX6 3177 aaKnown RBP3.01□□□□□ -1.93
Prkdc-201ENSMUST00000023352 Gm3285A0A1W2P7U0 201 aa3.01□□□□□ -1.93
Prkdc-201ENSMUST00000023352 Sprr4Q8CGN8 76 aa3.01□□□□□ -1.93
Prkdc-201ENSMUST00000023352 Chtf8P0CG14 533 aa3.01□□□□□ -1.93
Prkdc-201ENSMUST00000023352 4933415A04RikQ9D443 101 aa3.01□□□□□ -1.93
Prkdc-201ENSMUST00000023352 Gm9821Q8K076 103 aa3□□□□□ -1.93
Prkdc-201ENSMUST00000023352 Zcchc13Q9D548 170 aa3□□□□□ -1.93
Prkdc-201ENSMUST00000023352 Fam229bQ8CF36 80 aa2.99□□□□□ -1.93
Prkdc-201ENSMUST00000023352 Gm3646F6S692 53 aa2.99□□□□□ -1.93
Prkdc-201ENSMUST00000023352 Hivep1Q03172 2688 aa2.99□□□□□ -1.93
Prkdc-201ENSMUST00000023352 Gm21798J3QNU5 87 aa2.99□□□□□ -1.93
Prkdc-201ENSMUST00000023352 Camk2n1Q6QWF9 78 aa2.98□□□□□ -1.93
Prkdc-201ENSMUST00000023352 Ubr5Q80TP3 2792 aa2.98□□□□□ -1.93
Prkdc-201ENSMUST00000023352 A330070K13RikQ8CA53 115 aa2.97□□□□□ -1.93
Prkdc-201ENSMUST00000023352 ApcQ61315 2845 aa2.97□□□□□ -1.93
Prkdc-201ENSMUST00000023352 Col6a3E9PWQ3 3284 aa2.96□□□□□ -1.93
Prkdc-201ENSMUST00000023352 Muc2Q80Z19 2680 aa2.96□□□□□ -1.94
Prkdc-201ENSMUST00000023352 Cystm1Q8K353 104 aa2.96□□□□□ -1.94
Prkdc-201ENSMUST00000023352 Itpr2Q9Z329 2701 aa2.95□□□□□ -1.94
Prkdc-201ENSMUST00000023352 Defb37Q7TMD2 62 aa2.95□□□□□ -1.94
Prkdc-201ENSMUST00000023352 FlncQ8VHX6 2726 aaKnown RBP2.95□□□□□ -1.94
Prkdc-201ENSMUST00000023352 Krtap11-1E9Q2E9 183 aa2.95□□□□□ -1.94
Prkdc-201ENSMUST00000023352 Brca2P97929 3329 aa2.95□□□□□ -1.94
Prkdc-201ENSMUST00000023352 Col12a1Q60847 3120 aa2.94□□□□□ -1.94
Prkdc-201ENSMUST00000023352 Fam104aA2A6P4 185 aa2.94□□□□□ -1.94
Prkdc-201ENSMUST00000023352 VcanQ62059 3357 aa2.94□□□□□ -1.94
Prkdc-201ENSMUST00000023352 Odf3bQ5M8M2 238 aa2.94□□□□□ -1.94
Prkdc-201ENSMUST00000023352 Dmxl1Q6PNC0 3013 aa2.94□□□□□ -1.94
Prkdc-201ENSMUST00000023352 Gm37013Q8K491 104 aa2.93□□□□□ -1.94
Prkdc-201ENSMUST00000023352 Wdfy3Q6VNB8 3508 aa2.93□□□□□ -1.94
Prkdc-201ENSMUST00000023352 Gm10065F6TJM2 114 aa2.93□□□□□ -1.94
Prkdc-201ENSMUST00000023352 Celsr3Q91ZI0 3301 aa2.93□□□□□ -1.94
Prkdc-201ENSMUST00000023352 Gm7173A0A0G2JEB6 3132 aa2.93□□□□□ -1.94
Prkdc-201ENSMUST00000023352 SpegQ62407 3262 aa2.92□□□□□ -1.94
Prkdc-201ENSMUST00000023352 Sec61bQ9CQS8 96 aaKnown RBP2.92□□□□□ -1.94
Prkdc-201ENSMUST00000023352 Myo15aQ9QZZ4 3511 aa2.92□□□□□ -1.94
Prkdc-201ENSMUST00000023352 A730071L15RikQ8C4X0 137 aa2.92□□□□□ -1.94
Prkdc-201ENSMUST00000023352 Fam229aB2KGE5 128 aa2.92□□□□□ -1.94
Prkdc-201ENSMUST00000023352 Vps13aQ5H8C4 3166 aa2.91□□□□□ -1.94
Prkdc-201ENSMUST00000023352 KalrnA2CG49 2964 aa2.91□□□□□ -1.94
Prkdc-201ENSMUST00000023352 2310034C09RikQ9D746 214 aa2.91□□□□□ -1.94
Prkdc-201ENSMUST00000023352 Frem2Q6NVD0 3160 aa2.91□□□□□ -1.94
Prkdc-201ENSMUST00000023352 TgO08710 2766 aa2.91□□□□□ -1.94
Prkdc-201ENSMUST00000023352 Prune2Q52KR3 3084 aa2.9□□□□□ -1.95
Prkdc-201ENSMUST00000023352 Rev3lQ61493 3122 aa2.89□□□□□ -1.95
Prkdc-201ENSMUST00000023352 Plac8Q9JI48 112 aa2.89□□□□□ -1.95
Prkdc-201ENSMUST00000023352 Gm10320E9PW43 113 aa2.89□□□□□ -1.95
Prkdc-201ENSMUST00000023352 Spink7Q6IE32 76 aa2.89□□□□□ -1.95
Prkdc-201ENSMUST00000023352 NbdyA0A0N4SUI7 68 aa2.88□□□□□ -1.95
Prkdc-201ENSMUST00000023352 Sprr1aQ62266 144 aa2.88□□□□□ -1.95
Prkdc-201ENSMUST00000023352 Fbn2Q61555 2907 aa2.87□□□□□ -1.95
Prkdc-201ENSMUST00000023352 Srrm2Q8BTI8 2703 aaKnown RBP2.87□□□□□ -1.95
Prkdc-201ENSMUST00000023352 FcgbpE9Q0B5 2583 aa2.86□□□□□ -1.95
Prkdc-201ENSMUST00000023352 DspE9Q557 2883 aaKnown RBP2.86□□□□□ -1.95
Prkdc-201ENSMUST00000023352 Cox6b2Q80ZN9 88 aa2.86□□□□□ -1.95
Prkdc-201ENSMUST00000023352 Zzef1Q5SSH7 2924 aa2.85□□□□□ -1.95
Prkdc-201ENSMUST00000023352 Wdfy4E9Q2M9 3149 aa2.85□□□□□ -1.95
Prkdc-201ENSMUST00000023352 Defb1P56386 69 aa2.85□□□□□ -1.95
Prkdc-201ENSMUST00000023352 AspmQ8CJ27 3122 aa2.85□□□□□ -1.95
Prkdc-201ENSMUST00000023352 Igfn1Q3KNY0 2849 aa2.84□□□□□ -1.95
Prkdc-201ENSMUST00000023352 Dchs1E9PVD3 3291 aa2.84□□□□□ -1.95
Prkdc-201ENSMUST00000023352 Defb9Q8R2I6 67 aa2.84□□□□□ -1.95
Prkdc-201ENSMUST00000023352 Cfap54Q8C6S9 3106 aa2.84□□□□□ -1.95
Prkdc-201ENSMUST00000023352 AtmQ62388 3066 aa2.83□□□□□ -1.96
Prkdc-201ENSMUST00000023352 Rpl37Q9D823 97 aa2.83□□□□□ -1.96
Prkdc-201ENSMUST00000023352 BptfA2A654 3036 aaKnown RBP2.83□□□□□ -1.96
Prkdc-201ENSMUST00000023352 Gm10139O88245 57 aa2.83□□□□□ -1.96
Prkdc-201ENSMUST00000023352 Gm3250E9Q1M3 230 aa2.83□□□□□ -1.96
Prkdc-201ENSMUST00000023352 Fam168bQ80XQ8 194 aa2.83□□□□□ -1.96
Prkdc-201ENSMUST00000023352 Rps29P62274 56 aa2.82□□□□□ -1.96
Prkdc-201ENSMUST00000023352 Lrrc37aB1AWG4 3215 aa2.82□□□□□ -1.96
Prkdc-201ENSMUST00000023352 Gm16253D3Z167 63 aa2.82□□□□□ -1.96
Prkdc-201ENSMUST00000023352 Dchs2A0A0A6YW72 3346 aa2.81□□□□□ -1.96
Prkdc-201ENSMUST00000023352 BC029722A0A0N4SW31 51 aa2.81□□□□□ -1.96
Prkdc-201ENSMUST00000023352 MgaA2AWL7 3003 aaKnown RBP2.81□□□□□ -1.96
Prkdc-201ENSMUST00000023352 Gm4491E0CX42 125 aa2.81□□□□□ -1.96
Prkdc-201ENSMUST00000023352 6030445D17RikE9Q8F9 148 aa2.81□□□□□ -1.96
Prkdc-201ENSMUST00000023352 Romo1P60603 79 aa2.8□□□□□ -1.96
Prkdc-201ENSMUST00000023352 Anapc11Q9CPX9 84 aa2.8□□□□□ -1.96
Prkdc-201ENSMUST00000023352 Gm2310J3QNJ2 377 aa2.8□□□□□ -1.96
Prkdc-201ENSMUST00000023352 Ranbp2Q9ERU9 3053 aaKnown RBP2.8□□□□□ -1.96
Prkdc-201ENSMUST00000023352 Bod1lE9Q6J5 3032 aa2.8□□□□□ -1.96
Prkdc-201ENSMUST00000023352 FrylF8VQ05 3007 aa2.8□□□□□ -1.96
Prkdc-201ENSMUST00000023352 Ash1lQ99MY8 2958 aa2.79□□□□□ -1.96
Prkdc-201ENSMUST00000023352 NbeaQ9EPN1 2936 aa2.79□□□□□ -1.96
Prkdc-201ENSMUST00000023352 Ndufaf8A2AMZ4 74 aa2.79□□□□□ -1.96
Prkdc-201ENSMUST00000023352 Trank1Q8BV79 2999 aa2.78□□□□□ -1.96
Prkdc-201ENSMUST00000023352 Pdzd2E9Q1M1 2796 aa2.78□□□□□ -1.96
Prkdc-201ENSMUST00000023352 Gm40193A0A1B0GT39 78 aa2.77□□□□□ -1.97
Prkdc-201ENSMUST00000023352 Gm19426M0QWC7 77 aa2.77□□□□□ -1.97
Prkdc-201ENSMUST00000023352 Lama1P19137 3084 aa2.76□□□□□ -1.97
Prkdc-201ENSMUST00000023352 Gm3880A0A1B0GSB3 72 aa2.76□□□□□ -1.97
Prkdc-201ENSMUST00000023352 Krtap29-1A2A5X4 342 aa2.76□□□□□ -1.97
Prkdc-201ENSMUST00000023352 FryE9Q8I9 3020 aa2.75□□□□□ -1.97
Prkdc-201ENSMUST00000023352 Gm5767A0A0J9YTU8 78 aa2.74□□□□□ -1.97
Prkdc-201ENSMUST00000023352 Nf1Q04690 2841 aa2.74□□□□□ -1.97
Prkdc-201ENSMUST00000023352 Zfhx4Q9JJN2 3550 aa2.74□□□□□ -1.97
Prkdc-201ENSMUST00000023352 Tenm3Q9WTS6 2715 aa2.74□□□□□ -1.97
Prkdc-201ENSMUST00000023352 Gm3233E9Q2H5 230 aa2.73□□□□□ -1.97
Retrieved 100 of 22,080 RNA–protein pairs in 46.8 ms