RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Dnah10D3YYQ8 4591 aa10.69□□□□□ -0.7
Ctcf-201ENSMUST00000005841 Wfdc6bF6ULY1 148 aa10.69□□□□□ -0.7
Ctcf-201ENSMUST00000005841 Gm10160F6Y577 67 aa10.68□□□□□ -0.7
Ctcf-201ENSMUST00000005841 U90926O08546 118 aa10.68□□□□□ -0.7
Ctcf-201ENSMUST00000005841 Phxr4P15974 95 aa10.68□□□□□ -0.7
Ctcf-201ENSMUST00000005841 Sec61gP60060 68 aa10.66□□□□□ -0.7
Ctcf-201ENSMUST00000005841 Atox1O08997 68 aaKnown RBP10.66□□□□□ -0.7
Ctcf-201ENSMUST00000005841 Sox16Q62247 57 aa10.64□□□□□ -0.71
Ctcf-201ENSMUST00000005841 Defb40Q70KL2 73 aa10.64□□□□□ -0.71
Ctcf-201ENSMUST00000005841 Gm3233E9Q2H5 230 aa10.63□□□□□ -0.71
Ctcf-201ENSMUST00000005841 Dnah14A0A140LIJ4 4489 aa10.62□□□□□ -0.71
Ctcf-201ENSMUST00000005841 Reg3bP35230 175 aa10.62□□□□□ -0.71
Ctcf-201ENSMUST00000005841 Mast4Q811L6 2618 aa10.62□□□□□ -0.71
Ctcf-201ENSMUST00000005841 Gm21886J3QJU9 214 aa10.62□□□□□ -0.71
Ctcf-201ENSMUST00000005841 1700018G05RikA0A1B0GSI2 66 aa10.61□□□□□ -0.71
Ctcf-201ENSMUST00000005841 Gm12353A2AGJ4 60 aa10.61□□□□□ -0.71
Ctcf-201ENSMUST00000005841 Igkv3-12A0A140T8P0 119 aa10.6□□□□□ -0.71
Ctcf-201ENSMUST00000005841 Gm10139O88245 57 aa10.6□□□□□ -0.71
Ctcf-201ENSMUST00000005841 Gm3250E9Q1M3 230 aa10.6□□□□□ -0.71
Ctcf-201ENSMUST00000005841 MtorQ9JLN9 2549 aa10.59□□□□□ -0.71
Ctcf-201ENSMUST00000005841 Zfp462B1AWL2 2495 aaKnown RBP10.59□□□□□ -0.71
Ctcf-201ENSMUST00000005841 Epg5Q80TA9 2572 aa10.58□□□□□ -0.72
Ctcf-201ENSMUST00000005841 Gm17521F6QAC8 156 aa10.57□□□□□ -0.72
Ctcf-201ENSMUST00000005841 PolqQ8CGS6 2544 aa10.56□□□□□ -0.72
Ctcf-201ENSMUST00000005841 Defb12Q8K4N3 78 aa10.56□□□□□ -0.72
Ctcf-201ENSMUST00000005841 A0A286YE49 62 aa10.53□□□□□ -0.72
Ctcf-201ENSMUST00000005841 Itpr2Q9Z329 2701 aa10.53□□□□□ -0.72
Ctcf-201ENSMUST00000005841 Chtf8P0CG14 533 aa10.52□□□□□ -0.72
Ctcf-201ENSMUST00000005841 Megf8P60882 2789 aa10.52□□□□□ -0.73
Ctcf-201ENSMUST00000005841 1700042G07RikB1AUF7 90 aa10.51□□□□□ -0.73
Ctcf-201ENSMUST00000005841 Reg3aO09037 175 aa10.51□□□□□ -0.73
Ctcf-201ENSMUST00000005841 B9d2Q3UK10 175 aa10.51□□□□□ -0.73
Ctcf-201ENSMUST00000005841 Obox2E9PXV9 151 aa10.5□□□□□ -0.73
Ctcf-201ENSMUST00000005841 Fras1Q80T14 4010 aa10.49□□□□□ -0.73
Ctcf-201ENSMUST00000005841 Ccdc179J3QM76 67 aa10.48□□□□□ -0.73
Ctcf-201ENSMUST00000005841 Gm16485Q8C4B7 115 aa10.48□□□□□ -0.73
Ctcf-201ENSMUST00000005841 Chchd10Q7TNL9 138 aa10.48□□□□□ -0.73
Ctcf-201ENSMUST00000005841 Gm26620Q9CY65 116 aa10.47□□□□□ -0.73
Ctcf-201ENSMUST00000005841 1700074P13RikQ9D9G7 251 aa10.47□□□□□ -0.73
Ctcf-201ENSMUST00000005841 Brwd1Q921C3 2304 aa10.47□□□□□ -0.73
Ctcf-201ENSMUST00000005841 Rpl37aP61514 92 aa10.45□□□□□ -0.74
Ctcf-201ENSMUST00000005841 Plac8Q9JI48 112 aa10.45□□□□□ -0.74
Ctcf-201ENSMUST00000005841 Gm10643Q3URG9 111 aa10.45□□□□□ -0.74
Ctcf-201ENSMUST00000005841 Erdr1J3QMM0 206 aa10.43□□□□□ -0.74
Ctcf-201ENSMUST00000005841 Gm28230A0A0A0MQ91 144 aa10.42□□□□□ -0.74
Ctcf-201ENSMUST00000005841 TrrapQ80YV3 2565 aaKnown RBP10.41□□□□□ -0.74
Ctcf-201ENSMUST00000005841 9230102O04RikA2ASX7 82 aa10.41□□□□□ -0.74
Ctcf-201ENSMUST00000005841 Ube2bP63147 152 aa10.41□□□□□ -0.74
Ctcf-201ENSMUST00000005841 Gm3646F6S692 53 aa10.38□□□□□ -0.75
Ctcf-201ENSMUST00000005841 Hectd4E9Q2E4 4418 aa10.38□□□□□ -0.75
Ctcf-201ENSMUST00000005841 Wfdc13Q5DQQ6 81 aa10.37□□□□□ -0.75
Ctcf-201ENSMUST00000005841 CicQ924A2 2510 aa10.36□□□□□ -0.75
Ctcf-201ENSMUST00000005841 Myo18bE9PV66 2605 aa10.34□□□□□ -0.75
Ctcf-201ENSMUST00000005841 Phf5aP83870 110 aaKnown RBP10.33□□□□□ -0.76
Ctcf-201ENSMUST00000005841 Ube2aQ9Z255 152 aa10.31□□□□□ -0.76
Ctcf-201ENSMUST00000005841 Igkv3-3A0A140T8Q0 119 aa10.3□□□□□ -0.76
Ctcf-201ENSMUST00000005841 Gm20604F8WIA3 75 aa10.3□□□□□ -0.76
Ctcf-201ENSMUST00000005841 VwfQ8CIZ8 2813 aa10.3□□□□□ -0.76
Ctcf-201ENSMUST00000005841 Gm7138L7N2C3 230 aa10.3□□□□□ -0.76
Ctcf-201ENSMUST00000005841 Gm3238W4VSP7 230 aa10.3□□□□□ -0.76
Ctcf-201ENSMUST00000005841 Dnah7aE9Q0T8 4024 aa10.29□□□□□ -0.76
Ctcf-201ENSMUST00000005841 Dnah7cA0A087WR13 4024 aa10.28□□□□□ -0.76
Ctcf-201ENSMUST00000005841 2310061N02RikQ9D6S9 174 aa10.27□□□□□ -0.77
Ctcf-201ENSMUST00000005841 Hivep1Q03172 2688 aa10.26□□□□□ -0.77
Ctcf-201ENSMUST00000005841 Srrm2Q8BTI8 2703 aaKnown RBP10.25□□□□□ -0.77
Ctcf-201ENSMUST00000005841 Notch2O35516 2470 aa10.25□□□□□ -0.77
Ctcf-201ENSMUST00000005841 Igkv3-7A0A0G2JE31 119 aa10.24□□□□□ -0.77
Ctcf-201ENSMUST00000005841 Vps13dB1ART2 4390 aa10.24□□□□□ -0.77
Ctcf-201ENSMUST00000005841 Gm20661K7N787 53 aa10.23□□□□□ -0.77
Ctcf-201ENSMUST00000005841 Huwe1Q7TMY8 4377 aaKnown RBP10.21□□□□□ -0.77
Ctcf-201ENSMUST00000005841 Dnah2P0C6F1 4456 aa10.19□□□□□ -0.78
Ctcf-201ENSMUST00000005841 Gm10267M0QWD8 85 aa10.18□□□□□ -0.78
Ctcf-201ENSMUST00000005841 AtrQ9JKK8 2635 aa10.18□□□□□ -0.78
Ctcf-201ENSMUST00000005841 Gm10837Q3UTT8 145 aa10.17□□□□□ -0.78
Ctcf-201ENSMUST00000005841 Col6a5A6H584 2640 aa10.16□□□□□ -0.78
Ctcf-201ENSMUST00000005841 6030445D17RikE9Q8F9 148 aa10.15□□□□□ -0.78
Ctcf-201ENSMUST00000005841 FlnbQ80X90 2602 aaKnown RBP10.15□□□□□ -0.78
Ctcf-201ENSMUST00000005841 SycnQ8VCK7 134 aa10.1□□□□□ -0.79
Ctcf-201ENSMUST00000005841 PrkdcP97313 4128 aa10.09□□□□□ -0.79
Ctcf-201ENSMUST00000005841 Wfdc10Q3V2J9 124 aa10.07□□□□□ -0.8
Ctcf-201ENSMUST00000005841 TnxbO35452 4006 aa10.07□□□□□ -0.8
Ctcf-201ENSMUST00000005841 PtprqP0C5E4 2300 aa10.07□□□□□ -0.8
Ctcf-201ENSMUST00000005841 Ndufb1P0DN34 57 aa10.06□□□□□ -0.8
Ctcf-201ENSMUST00000005841 Gm27235Q3UW50 83 aa10.06□□□□□ -0.8
Ctcf-201ENSMUST00000005841 AW011738F6S7Q2 159 aa10.05□□□□□ -0.8
Ctcf-201ENSMUST00000005841 Spata3Q9D9T6 193 aa10.05□□□□□ -0.8
Ctcf-201ENSMUST00000005841 Defb9Q8R2I6 67 aa10.05□□□□□ -0.8
Ctcf-201ENSMUST00000005841 Gm36176A0A1W2P8D5 158 aa10.04□□□□□ -0.8
Ctcf-201ENSMUST00000005841 Muc6Q80T03 2850 aa10.04□□□□□ -0.8
Ctcf-201ENSMUST00000005841 SptssbQ925E8 76 aa10.04□□□□□ -0.8
Ctcf-201ENSMUST00000005841 Gm16253D3Z167 63 aa10.04□□□□□ -0.8
Ctcf-201ENSMUST00000005841 Gm21798J3QNU5 87 aa10.03□□□□□ -0.8
Ctcf-201ENSMUST00000005841 OxtP35454 125 aa10.03□□□□□ -0.8
Ctcf-201ENSMUST00000005841 Dnah5Q8VHE6 4621 aa10.03□□□□□ -0.8
Ctcf-201ENSMUST00000005841 PlecQ9QXS1 4691 aaKnown RBP10.03□□□□□ -0.8
Ctcf-201ENSMUST00000005841 Notch1Q01705 2531 aa10.02□□□□□ -0.8
Ctcf-201ENSMUST00000005841 Uqcr11Q9CPX8 56 aa10.01□□□□□ -0.81
Ctcf-201ENSMUST00000005841 HrnrQ8VHD8 2496 aa10.01□□□□□ -0.81
Ctcf-201ENSMUST00000005841 Pkd1O08852 4293 aa10□□□□□ -0.81
Ctcf-201ENSMUST00000005841 Limd2Q8BGB5 128 aa9.99□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 65.6 ms