RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Golgb1E9PVZ8 3238 aa12.22□□□□□ -0.45
Sort1-203ENSMUST00000135636 Gm9821Q8K076 103 aa12.21□□□□□ -0.45
Sort1-203ENSMUST00000135636 A330070K13RikQ8CA53 115 aa12.2□□□□□ -0.46
Sort1-203ENSMUST00000135636 Gm10197F6QEY5 67 aa12.18□□□□□ -0.46
Sort1-203ENSMUST00000135636 Spint4Q9D263 159 aa12.18□□□□□ -0.46
Sort1-203ENSMUST00000135636 Spink7Q6IE32 76 aa12.16□□□□□ -0.46
Sort1-203ENSMUST00000135636 AW011738F6S7Q2 159 aa12.15□□□□□ -0.46
Sort1-203ENSMUST00000135636 Zfp462B1AWL2 2495 aaKnown RBP12.15□□□□□ -0.47
Sort1-203ENSMUST00000135636 Mp68P56379 58 aa12.14□□□□□ -0.47
Sort1-203ENSMUST00000135636 Gm9508A0A1W2P7W0 230 aa12.14□□□□□ -0.47
Sort1-203ENSMUST00000135636 Jbts17Q8CE72 3214 aa12.14□□□□□ -0.47
Sort1-203ENSMUST00000135636 Coa6Q8BGD8 79 aa12.14□□□□□ -0.47
Sort1-203ENSMUST00000135636 Gm36176A0A1W2P8D5 158 aa12.13□□□□□ -0.47
Sort1-203ENSMUST00000135636 Gm19935A0A1B0GSF9 52 aa12.11□□□□□ -0.47
Sort1-203ENSMUST00000135636 4930518I15RikQ3V2W7 57 aa12.11□□□□□ -0.47
Sort1-203ENSMUST00000135636 PtprqP0C5E4 2300 aa12.09□□□□□ -0.47
Sort1-203ENSMUST00000135636 Sprr4Q8CGN8 76 aa12.08□□□□□ -0.48
Sort1-203ENSMUST00000135636 Gm42715A0A087WP63 3095 aaKnown RBP12.08□□□□□ -0.48
Sort1-203ENSMUST00000135636 Lelp1Q9DAE3 120 aa12.07□□□□□ -0.48
Sort1-203ENSMUST00000135636 Gm20538F6Z9R1 75 aa12.04□□□□□ -0.48
Sort1-203ENSMUST00000135636 Gm10337F7DEP7 55 aa12.03□□□□□ -0.48
Sort1-203ENSMUST00000135636 Tln1P26039 2541 aaKnown RBP12.01□□□□□ -0.49
Sort1-203ENSMUST00000135636 Sprr1bQ62267 153 aa12.01□□□□□ -0.49
Sort1-203ENSMUST00000135636 Gm17349F7BGH6 99 aa12□□□□□ -0.49
Sort1-203ENSMUST00000135636 Krtap15-1Q9QZU5 150 aa12□□□□□ -0.49
Sort1-203ENSMUST00000135636 TrrapQ80YV3 2565 aaKnown RBP12□□□□□ -0.49
Sort1-203ENSMUST00000135636 AI854703Q8BIN3 203 aa11.99□□□□□ -0.49
Sort1-203ENSMUST00000135636 Cypt15B1AXS0 87 aa11.99□□□□□ -0.49
Sort1-203ENSMUST00000135636 Crip3Q6Q6R3 243 aa11.98□□□□□ -0.49
Sort1-203ENSMUST00000135636 Lypd5Q9D7Z7 256 aa11.98□□□□□ -0.49
Sort1-203ENSMUST00000135636 Chtf8P0CG14 533 aa11.98□□□□□ -0.49
Sort1-203ENSMUST00000135636 Lama3Q61789 3330 aa11.95□□□□□ -0.5
Sort1-203ENSMUST00000135636 Ptpn13Q64512 2453 aa11.92□□□□□ -0.5
Sort1-203ENSMUST00000135636 Cdc42se1Q8BHL7 80 aa11.92□□□□□ -0.5
Sort1-203ENSMUST00000135636 C530025M09RikF6RGA8 229 aa11.91□□□□□ -0.5
Sort1-203ENSMUST00000135636 Krtap26-1Q9D7N2 215 aa11.9□□□□□ -0.5
Sort1-203ENSMUST00000135636 Gm26620Q9CY65 116 aa11.89□□□□□ -0.51
Sort1-203ENSMUST00000135636 SetxA2AKX3 2646 aa11.88□□□□□ -0.51
Sort1-203ENSMUST00000135636 AY074887Q8R5F9 132 aa11.83□□□□□ -0.52
Sort1-203ENSMUST00000135636 Dmbt1Q60997 2085 aa11.82□□□□□ -0.52
Sort1-203ENSMUST00000135636 Dnah12Q3V0Q1 3086 aa11.82□□□□□ -0.52
Sort1-203ENSMUST00000135636 CicQ924A2 2510 aa11.82□□□□□ -0.52
Sort1-203ENSMUST00000135636 Coa5Q99M07 74 aa11.81□□□□□ -0.52
Sort1-203ENSMUST00000135636 Psors1c2Q80ZC9 134 aa11.81□□□□□ -0.52
Sort1-203ENSMUST00000135636 Smim29Q8R043 75 aa11.81□□□□□ -0.52
Sort1-203ENSMUST00000135636 Epg5Q80TA9 2572 aa11.8□□□□□ -0.52
Sort1-203ENSMUST00000135636 A530084C06RikQ3UTW2 186 aa11.8□□□□□ -0.52
Sort1-203ENSMUST00000135636 Ep400Q8CHI8 3072 aaKnown RBP11.79□□□□□ -0.52
Sort1-203ENSMUST00000135636 Gm9507D3Z5T3 223 aa11.77□□□□□ -0.53
Sort1-203ENSMUST00000135636 Ankrd17Q99NH0 2603 aaKnown RBP11.76□□□□□ -0.53
Sort1-203ENSMUST00000135636 Eif4ebp3Q80VV3 101 aa11.75□□□□□ -0.53
Sort1-203ENSMUST00000135636 Cep192E9Q4Y4 2514 aaKnown RBP11.74□□□□□ -0.53
Sort1-203ENSMUST00000135636 Bahcc1Q3UHR0 2643 aa11.73□□□□□ -0.53
Sort1-203ENSMUST00000135636 Gm4491E0CX42 125 aa11.71□□□□□ -0.53
Sort1-203ENSMUST00000135636 CnbpP53996 178 aaKnown RBP11.71□□□□□ -0.54
Sort1-203ENSMUST00000135636 Usp34Q6ZQ93 3582 aa11.7□□□□□ -0.54
Sort1-203ENSMUST00000135636 NbdyA0A0N4SUI7 68 aa11.69□□□□□ -0.54
Sort1-203ENSMUST00000135636 Usp9xP70398 2559 aaKnown RBP11.68□□□□□ -0.54
Sort1-203ENSMUST00000135636 2310034C09RikQ9D746 214 aa11.67□□□□□ -0.54
Sort1-203ENSMUST00000135636 Fam104aA2A6P4 185 aa11.66□□□□□ -0.54
Sort1-203ENSMUST00000135636 Gm10308Q9CVR5 141 aa11.65□□□□□ -0.54
Sort1-203ENSMUST00000135636 Fam229aB2KGE5 128 aa11.64□□□□□ -0.55
Sort1-203ENSMUST00000135636 Gm3880A0A1B0GSB3 72 aa11.63□□□□□ -0.55
Sort1-203ENSMUST00000135636 Zcchc13Q9D548 170 aa11.62□□□□□ -0.55
Sort1-203ENSMUST00000135636 Krtap10-4Q08EG8 221 aa11.62□□□□□ -0.55
Sort1-203ENSMUST00000135636 Prune2Q52KR3 3084 aa11.61□□□□□ -0.55
Sort1-203ENSMUST00000135636 Gm11213A0A1B0GR83 88 aa11.6□□□□□ -0.55
Sort1-203ENSMUST00000135636 Bod1lE9Q6J5 3032 aa11.59□□□□□ -0.55
Sort1-203ENSMUST00000135636 Gm7276Q3TYW4 209 aa11.57□□□□□ -0.56
Sort1-203ENSMUST00000135636 MtorQ9JLN9 2549 aa11.56□□□□□ -0.56
Sort1-203ENSMUST00000135636 CriptO70333 101 aa11.56□□□□□ -0.56
Sort1-203ENSMUST00000135636 Cypt14J3QPF7 87 aa11.55□□□□□ -0.56
Sort1-203ENSMUST00000135636 Nsd1O88491 2588 aaKnown RBP11.52□□□□□ -0.56
Sort1-203ENSMUST00000135636 Gm21798J3QNU5 87 aa11.52□□□□□ -0.57
Sort1-203ENSMUST00000135636 6030445D17RikE9Q8F9 148 aa11.52□□□□□ -0.57
Sort1-203ENSMUST00000135636 Krtap16-1A2A5X5 502 aa11.52□□□□□ -0.57
Sort1-203ENSMUST00000135636 Krtap10-10A0A1W2P7T6 217 aa11.48□□□□□ -0.57
Sort1-203ENSMUST00000135636 Camk2n1Q6QWF9 78 aa11.47□□□□□ -0.57
Sort1-203ENSMUST00000135636 Gm10320E9PW43 113 aa11.46□□□□□ -0.58
Sort1-203ENSMUST00000135636 Setd2E9Q5F9 2537 aa11.45□□□□□ -0.58
Sort1-203ENSMUST00000135636 Zfp292Q9Z2U2 2698 aa11.44□□□□□ -0.58
Sort1-203ENSMUST00000135636 Abca12E9Q876 2595 aa11.44□□□□□ -0.58
Sort1-203ENSMUST00000135636 Gm10065F6TJM2 114 aa11.43□□□□□ -0.58
Sort1-203ENSMUST00000135636 Smr3aQ61900 147 aa11.42□□□□□ -0.58
Sort1-203ENSMUST00000135636 Krtap13O88375 197 aa11.41□□□□□ -0.58
Sort1-203ENSMUST00000135636 Cep350E9Q309 3095 aa11.4□□□□□ -0.58
Sort1-203ENSMUST00000135636 TrioQ0KL02 3102 aa11.4□□□□□ -0.59
Sort1-203ENSMUST00000135636 Uqcr11Q9CPX8 56 aa11.38□□□□□ -0.59
Sort1-203ENSMUST00000135636 Sec61bQ9CQS8 96 aaKnown RBP11.38□□□□□ -0.59
Sort1-203ENSMUST00000135636 Gm9955Q8CEJ8 102 aa11.37□□□□□ -0.59
Sort1-203ENSMUST00000135636 Usp9yF8VPU6 2556 aa11.36□□□□□ -0.59
Sort1-203ENSMUST00000135636 Fam229bQ8CF36 80 aa11.36□□□□□ -0.59
Sort1-203ENSMUST00000135636 Unc79Q0KK59 2596 aa11.36□□□□□ -0.59
Sort1-203ENSMUST00000135636 Col12a1Q60847 3120 aa11.36□□□□□ -0.59
Sort1-203ENSMUST00000135636 CenpfE9Q3P4 2997 aaKnown RBP11.34□□□□□ -0.59
Sort1-203ENSMUST00000135636 Phxr4P15974 95 aa11.29□□□□□ -0.6
Sort1-203ENSMUST00000135636 Usp24B1AY13 2617 aaKnown RBP11.26□□□□□ -0.61
Sort1-203ENSMUST00000135636 Odf3bQ5M8M2 238 aa11.25□□□□□ -0.61
Sort1-203ENSMUST00000135636 Gm5767A0A0J9YTU8 78 aa11.22□□□□□ -0.61
Sort1-203ENSMUST00000135636 Gm19426M0QWC7 77 aa11.22□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 183.8 ms