RNA–Protein interactions for RNA: ENSMUST00000102774.10

Sqstm1-202, Transcript of Sequestosome-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sqstm1, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-202ENSMUST00000102774 Fam19a5Q91WE9 132 aa12.25□□□□□ -0.45
Sqstm1-202ENSMUST00000102774 Spata45Q9CVW4 97 aa12.25□□□□□ -0.45
Sqstm1-202ENSMUST00000102774 Vps13dB1ART2 4390 aa12.25□□□□□ -0.45
Sqstm1-202ENSMUST00000102774 Fam19a1Q7TPG8 133 aa12.24□□□□□ -0.45
Sqstm1-202ENSMUST00000102774 Hint1P70349 126 aaKnown RBP12.23□□□□□ -0.45
Sqstm1-202ENSMUST00000102774 Defa23Q5G866 93 aa12.23□□□□□ -0.45
Sqstm1-202ENSMUST00000102774 Cox6cQ9CPQ1 76 aa12.23□□□□□ -0.45
Sqstm1-202ENSMUST00000102774 Prol1E9PYQ4 312 aa12.23□□□□□ -0.45
Sqstm1-202ENSMUST00000102774 Defa4P28311 92 aa12.23□□□□□ -0.45
Sqstm1-202ENSMUST00000102774 Ntn5Q3UQ22 452 aa12.23□□□□□ -0.45
Sqstm1-202ENSMUST00000102774 Mrpl52Q9D0Y8 121 aa12.23□□□□□ -0.45
Sqstm1-202ENSMUST00000102774 Gm16381A0A1Y7VKT9 73 aa12.21□□□□□ -0.45
Sqstm1-202ENSMUST00000102774 BC048502Q80Y74 154 aa12.21□□□□□ -0.45
Sqstm1-202ENSMUST00000102774 PkigO70139 76 aa12.2□□□□□ -0.46
Sqstm1-202ENSMUST00000102774 P84750 121 aa12.2□□□□□ -0.46
Sqstm1-202ENSMUST00000102774 Zcchc13Q9D548 170 aa12.2□□□□□ -0.46
Sqstm1-202ENSMUST00000102774 Klk12B2RVZ0 247 aa12.19□□□□□ -0.46
Sqstm1-202ENSMUST00000102774 Defa27F2Z403 93 aa12.19□□□□□ -0.46
Sqstm1-202ENSMUST00000102774 Gm10770F7D043 238 aa12.19□□□□□ -0.46
Sqstm1-202ENSMUST00000102774 Smim29Q8R043 75 aa12.19□□□□□ -0.46
Sqstm1-202ENSMUST00000102774 2310034G01RikA0A286YDL3 209 aa12.18□□□□□ -0.46
Sqstm1-202ENSMUST00000102774 Igkv1-35A0A0G2JDE5 120 aa12.18□□□□□ -0.46
Sqstm1-202ENSMUST00000102774 Gm10065F6TJM2 114 aa12.16□□□□□ -0.46
Sqstm1-202ENSMUST00000102774 Bud31Q6PGH1 103 aa12.16□□□□□ -0.46
Sqstm1-202ENSMUST00000102774 Cd164Q9R0L9 197 aa12.16□□□□□ -0.46
Sqstm1-202ENSMUST00000102774 Dmac1Q9CQ00 111 aa12.16□□□□□ -0.46
Sqstm1-202ENSMUST00000102774 Trav3-4A0A075B654 114 aa12.15□□□□□ -0.46
Sqstm1-202ENSMUST00000102774 E130218I03RikA0A0U1RNU5 63 aa12.15□□□□□ -0.47
Sqstm1-202ENSMUST00000102774 Dnah2P0C6F1 4456 aa12.14□□□□□ -0.47
Sqstm1-202ENSMUST00000102774 Igkv4-58A0A0G2JGI6 119 aa12.13□□□□□ -0.47
Sqstm1-202ENSMUST00000102774 Rpl39lQ9CQD0 51 aa12.13□□□□□ -0.47
Sqstm1-202ENSMUST00000102774 Gm10320E9PW43 113 aa12.11□□□□□ -0.47
Sqstm1-202ENSMUST00000102774 Ighv2-2A0A075B5P8 116 aa12.1□□□□□ -0.47
Sqstm1-202ENSMUST00000102774 Ighv2-5A0A0A6YY69 116 aa12.1□□□□□ -0.47
Sqstm1-202ENSMUST00000102774 Ighv10-1A0A0B4J1J6 119 aa12.1□□□□□ -0.47
Sqstm1-202ENSMUST00000102774 Krtap29-1A2A5X4 342 aa12.1□□□□□ -0.47
Sqstm1-202ENSMUST00000102774 P01821 116 aa12.1□□□□□ -0.47
Sqstm1-202ENSMUST00000102774 4930524J08RikQ9CUJ5 163 aa12.1□□□□□ -0.47
Sqstm1-202ENSMUST00000102774 Q9DAA7 145 aa12.1□□□□□ -0.47
Sqstm1-202ENSMUST00000102774 Gm28374F6SG70 93 aa12.08□□□□□ -0.48
Sqstm1-202ENSMUST00000102774 Znf414Q9DCK4 299 aa12.08□□□□□ -0.48
Sqstm1-202ENSMUST00000102774 Phf5aP83870 110 aaKnown RBP12.08□□□□□ -0.48
Sqstm1-202ENSMUST00000102774 Xlr5cQ9JJR2 179 aa12.08□□□□□ -0.48
Sqstm1-202ENSMUST00000102774 Dnah5Q8VHE6 4621 aa12.08□□□□□ -0.48
Sqstm1-202ENSMUST00000102774 Elof1P60003 83 aa12.07□□□□□ -0.48
Sqstm1-202ENSMUST00000102774 Gm7276Q3TYW4 209 aa12.07□□□□□ -0.48
Sqstm1-202ENSMUST00000102774 Gm11011D3Z3L9 86 aa12.06□□□□□ -0.48
Sqstm1-202ENSMUST00000102774 Defb9Q8R2I6 67 aa12.06□□□□□ -0.48
Sqstm1-202ENSMUST00000102774 Wfdc3Q14AE4 130 aa12.05□□□□□ -0.48
Sqstm1-202ENSMUST00000102774 Msrb1Q9JLC3 116 aa12.05□□□□□ -0.48
Sqstm1-202ENSMUST00000102774 Pkd1O08852 4293 aa12.04□□□□□ -0.48
Sqstm1-202ENSMUST00000102774 1600014C23RikQ9DAX4 101 aa12.04□□□□□ -0.48
Sqstm1-202ENSMUST00000102774 1700020N15RikL7MTX3 112 aa12.03□□□□□ -0.48
Sqstm1-202ENSMUST00000102774 Sigmar1O55242 223 aa12.03□□□□□ -0.48
Sqstm1-202ENSMUST00000102774 Ube2bP63147 152 aa12.03□□□□□ -0.48
Sqstm1-202ENSMUST00000102774 Acyp1P56376 99 aa12.02□□□□□ -0.49
Sqstm1-202ENSMUST00000102774 Fam104aA2A6P4 185 aa12.01□□□□□ -0.49
Sqstm1-202ENSMUST00000102774 Gm2696A0A1W2P709 240 aa12□□□□□ -0.49
Sqstm1-202ENSMUST00000102774 Igkv2-109A0A075B5K6 120 aa11.99□□□□□ -0.49
Sqstm1-202ENSMUST00000102774 Defa7P50705 93 aa11.98□□□□□ -0.49
Sqstm1-202ENSMUST00000102774 Ryr3A2AGL3 4863 aa11.97□□□□□ -0.49
Sqstm1-202ENSMUST00000102774 Krtap10-10A0A1W2P7T6 217 aa11.97□□□□□ -0.49
Sqstm1-202ENSMUST00000102774 TeppQ6IMH0 216 aa11.97□□□□□ -0.49
Sqstm1-202ENSMUST00000102774 Gpr15lA0A0B4J1N3 78 aa11.96□□□□□ -0.49
Sqstm1-202ENSMUST00000102774 Igkv1-122A0A140T8M9 119 aa11.96□□□□□ -0.49
Sqstm1-202ENSMUST00000102774 Wfdc10Q3V2J9 124 aa11.96□□□□□ -0.49
Sqstm1-202ENSMUST00000102774 Pxt1Q8K459 51 aa11.96□□□□□ -0.5
Sqstm1-202ENSMUST00000102774 Krtap13O88375 197 aa11.95□□□□□ -0.5
Sqstm1-202ENSMUST00000102774 Cited1P97769 203 aa11.95□□□□□ -0.5
Sqstm1-202ENSMUST00000102774 Defb37Q7TMD2 62 aa11.95□□□□□ -0.5
Sqstm1-202ENSMUST00000102774 Gm10767Q3TQP0 103 aa11.94□□□□□ -0.5
Sqstm1-202ENSMUST00000102774 Gm17521F6QAC8 156 aa11.93□□□□□ -0.5
Sqstm1-202ENSMUST00000102774 5730596B20RikQ8BQ08 205 aa11.93□□□□□ -0.5
Sqstm1-202ENSMUST00000102774 6030445D17RikE9Q8F9 148 aa11.92□□□□□ -0.5
Sqstm1-202ENSMUST00000102774 Tmem243B2RVB9 118 aa11.91□□□□□ -0.5
Sqstm1-202ENSMUST00000102774 Adm2Q7TNK8 150 aa11.91□□□□□ -0.5
Sqstm1-202ENSMUST00000102774 LbhQ9CX60 105 aa11.91□□□□□ -0.5
Sqstm1-202ENSMUST00000102774 Vps25Q9CQ80 176 aa11.9□□□□□ -0.5
Sqstm1-202ENSMUST00000102774 Gm7102J3QQ10 178 aa11.89□□□□□ -0.51
Sqstm1-202ENSMUST00000102774 A930002H24RikQ8C8Y3 163 aa11.88□□□□□ -0.51
Sqstm1-202ENSMUST00000102774 Ryr2E9Q401 4966 aaKnown RBP11.88□□□□□ -0.51
Sqstm1-202ENSMUST00000102774 Dync1h1Q9JHU4 4644 aaKnown RBP11.88□□□□□ -0.51
Sqstm1-202ENSMUST00000102774 NbdyA0A0N4SUI7 68 aa11.87□□□□□ -0.51
Sqstm1-202ENSMUST00000102774 A330070K13RikQ8CA53 115 aa11.87□□□□□ -0.51
Sqstm1-202ENSMUST00000102774 9530003J23RikQ8BM26 151 aa11.85□□□□□ -0.51
Sqstm1-202ENSMUST00000102774 Stard9Q80TF6 4561 aa11.84□□□□□ -0.51
Sqstm1-202ENSMUST00000102774 Ifitm6A0A1B0GS75 124 aa11.84□□□□□ -0.51
Sqstm1-202ENSMUST00000102774 A0A286YE02 88 aa11.84□□□□□ -0.51
Sqstm1-202ENSMUST00000102774 Gm10570F6VB42 170 aa11.84□□□□□ -0.51
Sqstm1-202ENSMUST00000102774 Ube2aQ9Z255 152 aa11.84□□□□□ -0.51
Sqstm1-202ENSMUST00000102774 Igkv8-26A0A075B5N5 123 aa11.84□□□□□ -0.51
Sqstm1-202ENSMUST00000102774 Lamtor3O88653 124 aa11.84□□□□□ -0.51
Sqstm1-202ENSMUST00000102774 Q8K1L6 76 aa11.83□□□□□ -0.52
Sqstm1-202ENSMUST00000102774 Defa28D3Z1V9 94 aa11.82□□□□□ -0.52
Sqstm1-202ENSMUST00000102774 Gm10642Q3TWM1 71 aa11.82□□□□□ -0.52
Sqstm1-202ENSMUST00000102774 AI606181Q8C7B9 129 aa11.82□□□□□ -0.52
Sqstm1-202ENSMUST00000102774 Fat1A0A1L1SQU7 4645 aa11.81□□□□□ -0.52
Sqstm1-202ENSMUST00000102774 Pkhd1E9PZ36 4059 aa11.8□□□□□ -0.52
Sqstm1-202ENSMUST00000102774 Ighv10-3A0A075B5T6 119 aa11.8□□□□□ -0.52
Sqstm1-202ENSMUST00000102774 ApobE9Q414 4505 aa11.8□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 45.3 ms