RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 P01821 116 aa8.26□□□□□ -1.09
Col8a1-201ENSMUST00000089332 Sostdc1Q9CQN4 206 aa8.26□□□□□ -1.09
Col8a1-201ENSMUST00000089332 Mki67E9PVX6 3177 aaKnown RBP8.25□□□□□ -1.09
Col8a1-201ENSMUST00000089332 AtrQ9JKK8 2635 aa8.25□□□□□ -1.09
Col8a1-201ENSMUST00000089332 Prol1E9PYQ4 312 aa8.25□□□□□ -1.09
Col8a1-201ENSMUST00000089332 6430550D23RikE9Q1X6 194 aa8.24□□□□□ -1.09
Col8a1-201ENSMUST00000089332 Phf5aP83870 110 aaKnown RBP8.24□□□□□ -1.09
Col8a1-201ENSMUST00000089332 1810062G17RikG3X8Y2 129 aa8.23□□□□□ -1.09
Col8a1-201ENSMUST00000089332 Gm10160F6Y577 67 aa8.23□□□□□ -1.09
Col8a1-201ENSMUST00000089332 Gm10772F7AIG4 85 aa8.22□□□□□ -1.09
Col8a1-201ENSMUST00000089332 Gpr15lA0A0B4J1N3 78 aa8.22□□□□□ -1.09
Col8a1-201ENSMUST00000089332 Bean1Q9EQG5 255 aa8.21□□□□□ -1.09
Col8a1-201ENSMUST00000089332 Gcn1E9PVA8 2671 aaKnown RBP8.21□□□□□ -1.09
Col8a1-201ENSMUST00000089332 Tnrc18Q80WC3 2878 aa8.2□□□□□ -1.1
Col8a1-201ENSMUST00000089332 Igkv8-27A0A0G2JF28 120 aa8.19□□□□□ -1.1
Col8a1-201ENSMUST00000089332 Usp24B1AY13 2617 aaKnown RBP8.19□□□□□ -1.1
Col8a1-201ENSMUST00000089332 Itpr1P11881 2749 aa8.19□□□□□ -1.1
Col8a1-201ENSMUST00000089332 Defb50Q6TU36 73 aa8.19□□□□□ -1.1
Col8a1-201ENSMUST00000089332 Gm27235Q3UW50 83 aa8.19□□□□□ -1.1
Col8a1-201ENSMUST00000089332 4930518I15RikQ3V2W7 57 aa8.19□□□□□ -1.1
Col8a1-201ENSMUST00000089332 Gm44790A0A0N4SV91 103 aa8.18□□□□□ -1.1
Col8a1-201ENSMUST00000089332 Hectd1Q69ZR2 2618 aaKnown RBP8.18□□□□□ -1.1
Col8a1-201ENSMUST00000089332 AW011738F6S7Q2 159 aa8.17□□□□□ -1.1
Col8a1-201ENSMUST00000089332 FlnaQ8BTM8 2647 aaKnown RBP8.16□□□□□ -1.1
Col8a1-201ENSMUST00000089332 Spaca4Q80ZQ0 127 aa8.15□□□□□ -1.1
Col8a1-201ENSMUST00000089332 AI854703Q8BIN3 203 aa8.15□□□□□ -1.11
Col8a1-201ENSMUST00000089332 Col12a1Q60847 3120 aa8.14□□□□□ -1.11
Col8a1-201ENSMUST00000089332 Prrc2cQ3TLH4 2846 aaKnown RBP8.14□□□□□ -1.11
Col8a1-201ENSMUST00000089332 Gm17689B3GLJ4 109 aa8.14□□□□□ -1.11
Col8a1-201ENSMUST00000089332 Gm10999F6Q4M4 69 aa8.14□□□□□ -1.11
Col8a1-201ENSMUST00000089332 Gm10197F6QEY5 67 aa8.14□□□□□ -1.11
Col8a1-201ENSMUST00000089332 AplnQ9R0R4 77 aa8.14□□□□□ -1.11
Col8a1-201ENSMUST00000089332 Usp34Q6ZQ93 3582 aa8.13□□□□□ -1.11
Col8a1-201ENSMUST00000089332 Gm10770F7D043 238 aa8.13□□□□□ -1.11
Col8a1-201ENSMUST00000089332 Chd7A2AJK6 2986 aaKnown RBP8.13□□□□□ -1.11
Col8a1-201ENSMUST00000089332 A930002H24RikQ8C8Y3 163 aa8.13□□□□□ -1.11
Col8a1-201ENSMUST00000089332 RetnlbQ99P86 105 aa8.13□□□□□ -1.11
Col8a1-201ENSMUST00000089332 Spint4Q9D263 159 aa8.12□□□□□ -1.11
Col8a1-201ENSMUST00000089332 4930507D05RikQ8C9C9 103 aa8.12□□□□□ -1.11
Col8a1-201ENSMUST00000089332 Krtap16-1A2A5X5 502 aa8.1□□□□□ -1.11
Col8a1-201ENSMUST00000089332 Q8BT88 171 aa8.1□□□□□ -1.11
Col8a1-201ENSMUST00000089332 Sprr4Q8CGN8 76 aa8.1□□□□□ -1.11
Col8a1-201ENSMUST00000089332 Gm5617Q91VN2 117 aa8.1□□□□□ -1.11
Col8a1-201ENSMUST00000089332 Limd2Q8BGB5 128 aa8.09□□□□□ -1.11
Col8a1-201ENSMUST00000089332 Myo15bI7HPW8 3033 aa8.08□□□□□ -1.12
Col8a1-201ENSMUST00000089332 Krtap11-1E9Q2E9 183 aa8.07□□□□□ -1.12
Col8a1-201ENSMUST00000089332 Rpl37aP61514 92 aa8.07□□□□□ -1.12
Col8a1-201ENSMUST00000089332 Rps28P62858 69 aaKnown RBP8.07□□□□□ -1.12
Col8a1-201ENSMUST00000089332 Fn1P11276 2477 aaKnown RBP8.07□□□□□ -1.12
Col8a1-201ENSMUST00000089332 Gm12216A0A1W2P827 62 aa8.07□□□□□ -1.12
Col8a1-201ENSMUST00000089332 Notch1Q01705 2531 aa8.06□□□□□ -1.12
Col8a1-201ENSMUST00000089332 Fam168bQ80XQ8 194 aa8.06□□□□□ -1.12
Col8a1-201ENSMUST00000089332 Q8BGJ3 129 aa8.06□□□□□ -1.12
Col8a1-201ENSMUST00000089332 HttP42859 3119 aa8.06□□□□□ -1.12
Col8a1-201ENSMUST00000089332 Lypd5Q9D7Z7 256 aa8.05□□□□□ -1.12
Col8a1-201ENSMUST00000089332 Gm10308Q9CVR5 141 aa8.05□□□□□ -1.12
Col8a1-201ENSMUST00000089332 A530084C06RikQ3UTW2 186 aa8.04□□□□□ -1.12
Col8a1-201ENSMUST00000089332 Gm3233E9Q2H5 230 aa8.04□□□□□ -1.12
Col8a1-201ENSMUST00000089332 AY074887Q8R5F9 132 aa8.03□□□□□ -1.12
Col8a1-201ENSMUST00000089332 Sprr1bQ62267 153 aa8.03□□□□□ -1.12
Col8a1-201ENSMUST00000089332 Map1aQ9QYR6 2776 aa8.02□□□□□ -1.13
Col8a1-201ENSMUST00000089332 OxtP35454 125 aa8.01□□□□□ -1.13
Col8a1-201ENSMUST00000089332 Prr13Q9CQJ5 137 aa8□□□□□ -1.13
Col8a1-201ENSMUST00000089332 Eif4ebp3Q80VV3 101 aa8□□□□□ -1.13
Col8a1-201ENSMUST00000089332 Lelp1Q9DAE3 120 aa7.99□□□□□ -1.13
Col8a1-201ENSMUST00000089332 7530416G11RikJ3QJX6 159 aa7.99□□□□□ -1.13
Col8a1-201ENSMUST00000089332 Nsd1O88491 2588 aaKnown RBP7.99□□□□□ -1.13
Col8a1-201ENSMUST00000089332 Akap13E9Q394 2776 aa7.98□□□□□ -1.13
Col8a1-201ENSMUST00000089332 Bod1lE9Q6J5 3032 aa7.98□□□□□ -1.13
Col8a1-201ENSMUST00000089332 Rev3lQ61493 3122 aa7.98□□□□□ -1.13
Col8a1-201ENSMUST00000089332 Fbn2Q61555 2907 aa7.98□□□□□ -1.13
Col8a1-201ENSMUST00000089332 Gm9195A0A140LHT4 2805 aa7.97□□□□□ -1.13
Col8a1-201ENSMUST00000089332 Dmxl1Q6PNC0 3013 aa7.96□□□□□ -1.13
Col8a1-201ENSMUST00000089332 Cfap54Q8C6S9 3106 aa7.95□□□□□ -1.14
Col8a1-201ENSMUST00000089332 Ash1lQ99MY8 2958 aa7.95□□□□□ -1.14
Col8a1-201ENSMUST00000089332 Gm20661K7N787 53 aa7.95□□□□□ -1.14
Col8a1-201ENSMUST00000089332 Stab1Q8R4Y4 2571 aa7.95□□□□□ -1.14
Col8a1-201ENSMUST00000089332 Gm7276Q3TYW4 209 aa7.95□□□□□ -1.14
Col8a1-201ENSMUST00000089332 Gm11213A0A1B0GR83 88 aa7.93□□□□□ -1.14
Col8a1-201ENSMUST00000089332 Defb9Q8R2I6 67 aa7.92□□□□□ -1.14
Col8a1-201ENSMUST00000089332 NipblQ6KCD5 2798 aaKnown RBP7.91□□□□□ -1.14
Col8a1-201ENSMUST00000089332 Dmbt1Q60997 2085 aa7.91□□□□□ -1.14
Col8a1-201ENSMUST00000089332 KalrnA2CG49 2964 aa7.91□□□□□ -1.14
Col8a1-201ENSMUST00000089332 CnbpP53996 178 aaKnown RBP7.91□□□□□ -1.14
Col8a1-201ENSMUST00000089332 MgaA2AWL7 3003 aaKnown RBP7.91□□□□□ -1.14
Col8a1-201ENSMUST00000089332 Cypt15B1AXS0 87 aa7.9□□□□□ -1.14
Col8a1-201ENSMUST00000089332 Defb1P56386 69 aa7.9□□□□□ -1.14
Col8a1-201ENSMUST00000089332 Mast4Q811L6 2618 aa7.9□□□□□ -1.14
Col8a1-201ENSMUST00000089332 Gm11565A2A4M7 156 aa7.89□□□□□ -1.15
Col8a1-201ENSMUST00000089332 Cdh23Q99PF4 3354 aa7.88□□□□□ -1.15
Col8a1-201ENSMUST00000089332 C530025M09RikF6RGA8 229 aa7.88□□□□□ -1.15
Col8a1-201ENSMUST00000089332 Coa5Q99M07 74 aa7.88□□□□□ -1.15
Col8a1-201ENSMUST00000089332 Cdc42se1Q8BHL7 80 aa7.87□□□□□ -1.15
Col8a1-201ENSMUST00000089332 Plac8Q9JI48 112 aa7.87□□□□□ -1.15
Col8a1-201ENSMUST00000089332 Ranbp2Q9ERU9 3053 aaKnown RBP7.85□□□□□ -1.15
Col8a1-201ENSMUST00000089332 AtmQ62388 3066 aa7.85□□□□□ -1.15
Col8a1-201ENSMUST00000089332 A330070K13RikQ8CA53 115 aa7.85□□□□□ -1.15
Col8a1-201ENSMUST00000089332 Ubr5Q80TP3 2792 aa7.85□□□□□ -1.15
Col8a1-201ENSMUST00000089332 Vps13aQ5H8C4 3166 aa7.84□□□□□ -1.15
Col8a1-201ENSMUST00000089332 Zcchc13Q9D548 170 aa7.84□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 61.9 ms