RNA–Protein interactions for RNA: ENSMUST00000113690.7

Tpm1-209, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 3 BASIC

Gene Tpm1, Length 2,890 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-209ENSMUST00000113690 Gm5153P01627 120 aa10.15□□□□□ -0.78
Tpm1-209ENSMUST00000113690 Ly6c2P0CW03 131 aa10.15□□□□□ -0.78
Tpm1-209ENSMUST00000113690 Odf3l2Q3TZ65 277 aa10.15□□□□□ -0.78
Tpm1-209ENSMUST00000113690 Fam229bQ8CF36 80 aa10.15□□□□□ -0.78
Tpm1-209ENSMUST00000113690 Lyrm9Q3UN90 78 aa10.15□□□□□ -0.79
Tpm1-209ENSMUST00000113690 Myo18bE9PV66 2605 aa10.15□□□□□ -0.79
Tpm1-209ENSMUST00000113690 Gm3250E9Q1M3 230 aa10.14□□□□□ -0.79
Tpm1-209ENSMUST00000113690 Serp2Q6TAW2 65 aa10.14□□□□□ -0.79
Tpm1-209ENSMUST00000113690 Ank2Q8C8R3 3898 aa10.14□□□□□ -0.79
Tpm1-209ENSMUST00000113690 Trav9n-4A0A075B631 113 aa10.14□□□□□ -0.79
Tpm1-209ENSMUST00000113690 Tmem86bQ497J1 226 aa10.14□□□□□ -0.79
Tpm1-209ENSMUST00000113690 Tmem254aP0DN89 123 aa10.13□□□□□ -0.79
Tpm1-209ENSMUST00000113690 Tmem254bP0DN90 123 aa10.13□□□□□ -0.79
Tpm1-209ENSMUST00000113690 Tmem254cP0DN91 123 aa10.13□□□□□ -0.79
Tpm1-209ENSMUST00000113690 Ntn5Q3UQ22 452 aa10.13□□□□□ -0.79
Tpm1-209ENSMUST00000113690 PrcdQ00LT2 53 aa10.13□□□□□ -0.79
Tpm1-209ENSMUST00000113690 Spink4O35679 86 aa10.12□□□□□ -0.79
Tpm1-209ENSMUST00000113690 A830031A19RikQ8BNT5 113 aa10.12□□□□□ -0.79
Tpm1-209ENSMUST00000113690 Leap2Q91V13 76 aa10.12□□□□□ -0.79
Tpm1-209ENSMUST00000113690 Gm10518F6UQQ9 182 aa10.12□□□□□ -0.79
Tpm1-209ENSMUST00000113690 Col7a1Q63870 2944 aa10.12□□□□□ -0.79
Tpm1-209ENSMUST00000113690 Igkv8-21A0A140T8P7 120 aa10.12□□□□□ -0.79
Tpm1-209ENSMUST00000113690 Igkv8-16A0A0G2JDG9 121 aa10.11□□□□□ -0.79
Tpm1-209ENSMUST00000113690 Gm9903Q8C9Y8 129 aa10.11□□□□□ -0.79
Tpm1-209ENSMUST00000113690 Cd99Q8VCN6 175 aa10.1□□□□□ -0.79
Tpm1-209ENSMUST00000113690 E130218I03RikA0A0U1RNU5 63 aa10.1□□□□□ -0.79
Tpm1-209ENSMUST00000113690 Igkv8-27A0A0G2JF28 120 aa10.09□□□□□ -0.79
Tpm1-209ENSMUST00000113690 Igkv8-30A0A140T8M3 121 aa10.09□□□□□ -0.79
Tpm1-209ENSMUST00000113690 Defb2P82020 71 aa10.09□□□□□ -0.79
Tpm1-209ENSMUST00000113690 Unc79Q0KK59 2596 aa10.09□□□□□ -0.79
Tpm1-209ENSMUST00000113690 Ube2d4D3YUH6 135 aa10.08□□□□□ -0.8
Tpm1-209ENSMUST00000113690 TrrapQ80YV3 2565 aaKnown RBP10.08□□□□□ -0.8
Tpm1-209ENSMUST00000113690 Gm43218A0A0G2JGT0 114 aa10.08□□□□□ -0.8
Tpm1-209ENSMUST00000113690 Reg3dQ9QUS9 175 aa10.08□□□□□ -0.8
Tpm1-209ENSMUST00000113690 Trbv13-2A0A140T8N6 113 aa10.07□□□□□ -0.8
Tpm1-209ENSMUST00000113690 Igkv8-24A0A140T8P5 121 aa10.07□□□□□ -0.8
Tpm1-209ENSMUST00000113690 Sprr1bQ62267 153 aa10.07□□□□□ -0.8
Tpm1-209ENSMUST00000113690 B230307C23RikQ8BLB2 64 aa10.07□□□□□ -0.8
Tpm1-209ENSMUST00000113690 Ormdl1Q921I0 153 aa10.07□□□□□ -0.8
Tpm1-209ENSMUST00000113690 Ighv10-3A0A075B5T6 119 aa10.06□□□□□ -0.8
Tpm1-209ENSMUST00000113690 Tex15F8VPN2 2785 aa10.06□□□□□ -0.8
Tpm1-209ENSMUST00000113690 Higd2aQ9CQJ1 106 aa10.05□□□□□ -0.8
Tpm1-209ENSMUST00000113690 Gm3233E9Q2H5 230 aa10.05□□□□□ -0.8
Tpm1-209ENSMUST00000113690 Ighv2-9A0A075B5Q5 116 aa10.04□□□□□ -0.8
Tpm1-209ENSMUST00000113690 Ighv1-59A0A0A6YXE0 117 aa10.04□□□□□ -0.8
Tpm1-209ENSMUST00000113690 Igkv4-61A0A0G2JH00 117 aa10.04□□□□□ -0.8
Tpm1-209ENSMUST00000113690 Lamtor3O88653 124 aa10.04□□□□□ -0.8
Tpm1-209ENSMUST00000113690 A0A286YCN5 57 aa10.04□□□□□ -0.8
Tpm1-209ENSMUST00000113690 Ubl5Q9EPV8 73 aa10.04□□□□□ -0.8
Tpm1-209ENSMUST00000113690 Krtap11-1E9Q2E9 183 aa10.03□□□□□ -0.8
Tpm1-209ENSMUST00000113690 Gm9805F6YK59 57 aa10.03□□□□□ -0.8
Tpm1-209ENSMUST00000113690 Gm10308Q9CVR5 141 aa10.03□□□□□ -0.8
Tpm1-209ENSMUST00000113690 Igkv8-26A0A075B5N5 123 aa10.03□□□□□ -0.8
Tpm1-209ENSMUST00000113690 Igkv3-9A0A140T8P4 119 aa10.02□□□□□ -0.8
Tpm1-209ENSMUST00000113690 Gm17689B3GLJ4 109 aa10.02□□□□□ -0.8
Tpm1-209ENSMUST00000113690 Tmem258P61166 79 aa10.02□□□□□ -0.8
Tpm1-209ENSMUST00000113690 Gm9767G3X930 207 aa10.01□□□□□ -0.81
Tpm1-209ENSMUST00000113690 CnbpP53996 178 aaKnown RBP10□□□□□ -0.81
Tpm1-209ENSMUST00000113690 Fam19a3Q7TPG6 132 aa10□□□□□ -0.81
Tpm1-209ENSMUST00000113690 GhrhP16043 103 aa10□□□□□ -0.81
Tpm1-209ENSMUST00000113690 Samd13D3YUG0 102 aa10□□□□□ -0.81
Tpm1-209ENSMUST00000113690 BikO70337 150 aa10□□□□□ -0.81
Tpm1-209ENSMUST00000113690 Brk1Q91VR8 75 aa10□□□□□ -0.81
Tpm1-209ENSMUST00000113690 P01819 144 aa9.99□□□□□ -0.81
Tpm1-209ENSMUST00000113690 Mrpl52Q9D0Y8 121 aa9.99□□□□□ -0.81
Tpm1-209ENSMUST00000113690 Defb37Q7TMD2 62 aa9.98□□□□□ -0.81
Tpm1-209ENSMUST00000113690 Msrb1Q9JLC3 116 aa9.98□□□□□ -0.81
Tpm1-209ENSMUST00000113690 D730001G18RikA0A087WQU7 115 aa9.97□□□□□ -0.81
Tpm1-209ENSMUST00000113690 Tcl1b3P56842 122 aa9.97□□□□□ -0.81
Tpm1-209ENSMUST00000113690 SnurfQ9WU12 71 aa9.97□□□□□ -0.81
Tpm1-209ENSMUST00000113690 Cox7bP56393 80 aa9.97□□□□□ -0.81
Tpm1-209ENSMUST00000113690 Rps28P62858 69 aaKnown RBP9.97□□□□□ -0.81
Tpm1-209ENSMUST00000113690 Fam19a5Q91WE9 132 aa9.97□□□□□ -0.81
Tpm1-209ENSMUST00000113690 Q8R092 253 aa9.96□□□□□ -0.81
Tpm1-209ENSMUST00000113690 4930556J24RikQ9D4U7 146 aa9.96□□□□□ -0.81
Tpm1-209ENSMUST00000113690 Gm19935A0A1B0GSF9 52 aa9.96□□□□□ -0.81
Tpm1-209ENSMUST00000113690 Igkv1-110A0A0B4J1I0 119 aa9.96□□□□□ -0.82
Tpm1-209ENSMUST00000113690 Krtap24-1G3X9A2 248 aa9.96□□□□□ -0.82
Tpm1-209ENSMUST00000113690 Igkv1-88A0A140T8N1 120 aa9.95□□□□□ -0.82
Tpm1-209ENSMUST00000113690 9530003J23RikQ8BM26 151 aa9.95□□□□□ -0.82
Tpm1-209ENSMUST00000113690 Dad1P61804 113 aa9.95□□□□□ -0.82
Tpm1-209ENSMUST00000113690 Ighv13-2A0A0A6YWN3 119 aa9.93□□□□□ -0.82
Tpm1-209ENSMUST00000113690 Ighv10-1A0A0B4J1J6 119 aa9.93□□□□□ -0.82
Tpm1-209ENSMUST00000113690 Inafm2A0A1L1STD6 152 aa9.93□□□□□ -0.82
Tpm1-209ENSMUST00000113690 A730071L15RikQ8C4X0 137 aa9.92□□□□□ -0.82
Tpm1-209ENSMUST00000113690 Mast4Q811L6 2618 aa9.92□□□□□ -0.82
Tpm1-209ENSMUST00000113690 A830005F24RikQ8BRT5 167 aa9.92□□□□□ -0.82
Tpm1-209ENSMUST00000113690 Nbeal2Q6ZQA0 2742 aa9.91□□□□□ -0.82
Tpm1-209ENSMUST00000113690 Igkv3-1A0A075B5P1 119 aa9.9□□□□□ -0.82
Tpm1-209ENSMUST00000113690 AY074887Q8R5F9 132 aa9.9□□□□□ -0.82
Tpm1-209ENSMUST00000113690 Rbm3O89086 153 aaKnown RBP9.9□□□□□ -0.82
Tpm1-209ENSMUST00000113690 ApcQ61315 2845 aa9.9□□□□□ -0.83
Tpm1-209ENSMUST00000113690 2310034G01RikA0A286YDL3 209 aa9.89□□□□□ -0.83
Tpm1-209ENSMUST00000113690 Ufsp1Q9CZP0 217 aa9.89□□□□□ -0.83
Tpm1-209ENSMUST00000113690 Defa27F2Z403 93 aa9.89□□□□□ -0.83
Tpm1-209ENSMUST00000113690 Gm10770F7D043 238 aa9.88□□□□□ -0.83
Tpm1-209ENSMUST00000113690 E130114P18RikF6S0S7 154 aa9.87□□□□□ -0.83
Tpm1-209ENSMUST00000113690 Cd164Q9R0L9 197 aa9.87□□□□□ -0.83
Tpm1-209ENSMUST00000113690 Igkv8-34A0A0G2JDU0 121 aa9.86□□□□□ -0.83
Tpm1-209ENSMUST00000113690 A730009L09RikA0A1B0GS82 72 aa9.86□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 53.9 ms