RNA–Protein interactions for RNA: ENSMUST00000109444.2

Col4a3bp-202, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 5,285 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-202ENSMUST00000109444 Gm16485Q8C4B7 115 aa12.45□□□□□ -0.42
Col4a3bp-202ENSMUST00000109444 Cd164Q9R0L9 197 aa12.45□□□□□ -0.42
Col4a3bp-202ENSMUST00000109444 Cox6a2P43023 97 aa12.44□□□□□ -0.42
Col4a3bp-202ENSMUST00000109444 Spint4Q9D263 159 aa12.43□□□□□ -0.42
Col4a3bp-202ENSMUST00000109444 Ankhd1E9PUR0 2548 aaKnown RBP12.42□□□□□ -0.42
Col4a3bp-202ENSMUST00000109444 Gm28230A0A0A0MQ91 144 aa12.4□□□□□ -0.42
Col4a3bp-202ENSMUST00000109444 Gm10300Q8C8P7 189 aa12.4□□□□□ -0.42
Col4a3bp-202ENSMUST00000109444 6430550D23RikE9Q1X6 194 aa12.4□□□□□ -0.42
Col4a3bp-202ENSMUST00000109444 Mrpl34Q99N91 92 aa12.39□□□□□ -0.43
Col4a3bp-202ENSMUST00000109444 OtoglF7A4A7 2325 aa12.39□□□□□ -0.43
Col4a3bp-202ENSMUST00000109444 Msrb1Q9JLC3 116 aa12.39□□□□□ -0.43
Col4a3bp-202ENSMUST00000109444 Elof1P60003 83 aa12.38□□□□□ -0.43
Col4a3bp-202ENSMUST00000109444 Gm10308Q9CVR5 141 aa12.38□□□□□ -0.43
Col4a3bp-202ENSMUST00000109444 Igkv8-27A0A0G2JF28 120 aa12.38□□□□□ -0.43
Col4a3bp-202ENSMUST00000109444 AI854703Q8BIN3 203 aa12.38□□□□□ -0.43
Col4a3bp-202ENSMUST00000109444 Myo9aQ8C170 2542 aa12.37□□□□□ -0.43
Col4a3bp-202ENSMUST00000109444 Fam19a3Q7TPG6 132 aa12.37□□□□□ -0.43
Col4a3bp-202ENSMUST00000109444 Gm11627A6PWP4 55 aa12.37□□□□□ -0.43
Col4a3bp-202ENSMUST00000109444 Tln1P26039 2541 aaKnown RBP12.37□□□□□ -0.43
Col4a3bp-202ENSMUST00000109444 BC067074F6RXI4 2391 aa12.35□□□□□ -0.43
Col4a3bp-202ENSMUST00000109444 Gm10197F6QEY5 67 aa12.35□□□□□ -0.43
Col4a3bp-202ENSMUST00000109444 H2al1mQ9DAD9 105 aa12.34□□□□□ -0.43
Col4a3bp-202ENSMUST00000109444 NbasE9Q411 2356 aa12.32□□□□□ -0.44
Col4a3bp-202ENSMUST00000109444 A730009L09RikA0A1B0GS82 72 aa12.32□□□□□ -0.44
Col4a3bp-202ENSMUST00000109444 Igkv8-28A0A0G2JE47 121 aa12.32□□□□□ -0.44
Col4a3bp-202ENSMUST00000109444 Dmac1Q9CQ00 111 aa12.32□□□□□ -0.44
Col4a3bp-202ENSMUST00000109444 Zfyve26Q5DU37 2529 aa12.31□□□□□ -0.44
Col4a3bp-202ENSMUST00000109444 Prr13Q9CQJ5 137 aa12.3□□□□□ -0.44
Col4a3bp-202ENSMUST00000109444 Gm16181B0V2H2 73 aa12.29□□□□□ -0.44
Col4a3bp-202ENSMUST00000109444 Wfdc6bF6ULY1 148 aa12.29□□□□□ -0.44
Col4a3bp-202ENSMUST00000109444 Gm3285A0A1W2P7U0 201 aa12.29□□□□□ -0.44
Col4a3bp-202ENSMUST00000109444 Reg3aO09037 175 aa12.29□□□□□ -0.44
Col4a3bp-202ENSMUST00000109444 Gm10160F6Y577 67 aa12.28□□□□□ -0.44
Col4a3bp-202ENSMUST00000109444 E130208F15RikQ3UPV3 143 aa12.27□□□□□ -0.44
Col4a3bp-202ENSMUST00000109444 Defb38Q7TNV7 63 aa12.27□□□□□ -0.45
Col4a3bp-202ENSMUST00000109444 A530084C06RikQ3UTW2 186 aa12.26□□□□□ -0.45
Col4a3bp-202ENSMUST00000109444 2310034G01RikA0A286YDL3 209 aa12.25□□□□□ -0.45
Col4a3bp-202ENSMUST00000109444 Adm2Q7TNK8 150 aa12.25□□□□□ -0.45
Col4a3bp-202ENSMUST00000109444 Gm10772F7AIG4 85 aa12.25□□□□□ -0.45
Col4a3bp-202ENSMUST00000109444 Piezo2Q8CD54 2822 aa12.25□□□□□ -0.45
Col4a3bp-202ENSMUST00000109444 Limd2Q8BGB5 128 aa12.24□□□□□ -0.45
Col4a3bp-202ENSMUST00000109444 Defb37Q7TMD2 62 aa12.24□□□□□ -0.45
Col4a3bp-202ENSMUST00000109444 Gm28374F6SG70 93 aa12.23□□□□□ -0.45
Col4a3bp-202ENSMUST00000109444 7530416G11RikJ3QJX6 159 aa12.23□□□□□ -0.45
Col4a3bp-202ENSMUST00000109444 Igkv3-7A0A0G2JE31 119 aa12.23□□□□□ -0.45
Col4a3bp-202ENSMUST00000109444 Gm21886J3QJU9 214 aa12.22□□□□□ -0.45
Col4a3bp-202ENSMUST00000109444 4930519P11RikQ9CUJ8 166 aa12.2□□□□□ -0.46
Col4a3bp-202ENSMUST00000109444 Piezo1E2JF22 2547 aa12.2□□□□□ -0.46
Col4a3bp-202ENSMUST00000109444 1700018G05RikA0A1B0GSI2 66 aa12.19□□□□□ -0.46
Col4a3bp-202ENSMUST00000109444 Prol1E9PYQ4 312 aa12.18□□□□□ -0.46
Col4a3bp-202ENSMUST00000109444 Lrrk2Q5S006 2527 aa12.18□□□□□ -0.46
Col4a3bp-202ENSMUST00000109444 Abca2P41234 2434 aa12.17□□□□□ -0.46
Col4a3bp-202ENSMUST00000109444 Gm10770F7D043 238 aa12.15□□□□□ -0.46
Col4a3bp-202ENSMUST00000109444 Gm10837Q3UTT8 145 aa12.15□□□□□ -0.46
Col4a3bp-202ENSMUST00000109444 Bean1Q9EQG5 255 aa12.15□□□□□ -0.46
Col4a3bp-202ENSMUST00000109444 Defb10Q8R2I8 73 aa12.15□□□□□ -0.47
Col4a3bp-202ENSMUST00000109444 Gm44790A0A0N4SV91 103 aa12.14□□□□□ -0.47
Col4a3bp-202ENSMUST00000109444 Cdc42se1Q8BHL7 80 aa12.13□□□□□ -0.47
Col4a3bp-202ENSMUST00000109444 Igkv8-19A0A0G2JFN8 121 aa12.13□□□□□ -0.47
Col4a3bp-202ENSMUST00000109444 Snhg11Q4G0K9 87 aa12.11□□□□□ -0.47
Col4a3bp-202ENSMUST00000109444 Sprr1bQ62267 153 aa12.11□□□□□ -0.47
Col4a3bp-202ENSMUST00000109444 Defb50Q6TU36 73 aa12.1□□□□□ -0.47
Col4a3bp-202ENSMUST00000109444 Wfdc17Q5SSJ1 76 aa12.1□□□□□ -0.47
Col4a3bp-202ENSMUST00000109444 Ttc28Q80XJ3 2450 aa12.1□□□□□ -0.47
Col4a3bp-202ENSMUST00000109444 Wfdc3Q14AE4 130 aa12.1□□□□□ -0.47
Col4a3bp-202ENSMUST00000109444 Hcfc1Q61191 2045 aaKnown RBP12.09□□□□□ -0.47
Col4a3bp-202ENSMUST00000109444 C2cd3Q52KB6 2323 aa12.09□□□□□ -0.47
Col4a3bp-202ENSMUST00000109444 1600014C23RikQ9DAX4 101 aa12.08□□□□□ -0.48
Col4a3bp-202ENSMUST00000109444 Krtap24-1G3X9A2 248 aa12.06□□□□□ -0.48
Col4a3bp-202ENSMUST00000109444 Rif1Q6PR54 2419 aaKnown RBP12.06□□□□□ -0.48
Col4a3bp-202ENSMUST00000109444 Eif4ebp3Q80VV3 101 aa12.06□□□□□ -0.48
Col4a3bp-202ENSMUST00000109444 Gm17689B3GLJ4 109 aa12.04□□□□□ -0.48
Col4a3bp-202ENSMUST00000109444 Ly6g6cQ9Z1Q4 126 aa12.03□□□□□ -0.48
Col4a3bp-202ENSMUST00000109444 1810062G17RikG3X8Y2 129 aa12.02□□□□□ -0.48
Col4a3bp-202ENSMUST00000109444 Nav3Q80TN7 2359 aa12.02□□□□□ -0.49
Col4a3bp-202ENSMUST00000109444 AY074887Q8R5F9 132 aa12.01□□□□□ -0.49
Col4a3bp-202ENSMUST00000109444 Coa5Q99M07 74 aa12.01□□□□□ -0.49
Col4a3bp-202ENSMUST00000109444 AI606181Q8C7B9 129 aa12□□□□□ -0.49
Col4a3bp-202ENSMUST00000109444 Gm7276Q3TYW4 209 aa11.98□□□□□ -0.49
Col4a3bp-202ENSMUST00000109444 Gm10642Q3TWM1 71 aa11.98□□□□□ -0.49
Col4a3bp-202ENSMUST00000109444 Hivep2Q3UHF7 2430 aa11.98□□□□□ -0.49
Col4a3bp-202ENSMUST00000109444 Defb39Q70KL3 74 aa11.96□□□□□ -0.49
Col4a3bp-202ENSMUST00000109444 Sprr4Q8CGN8 76 aa11.96□□□□□ -0.49
Col4a3bp-202ENSMUST00000109444 Gm20661K7N787 53 aa11.95□□□□□ -0.5
Col4a3bp-202ENSMUST00000109444 Usp9xP70398 2559 aaKnown RBP11.95□□□□□ -0.5
Col4a3bp-202ENSMUST00000109444 Gm27235Q3UW50 83 aa11.95□□□□□ -0.5
Col4a3bp-202ENSMUST00000109444 Znf414Q9DCK4 299 aa11.95□□□□□ -0.5
Col4a3bp-202ENSMUST00000109444 A930002H24RikQ8C8Y3 163 aa11.94□□□□□ -0.5
Col4a3bp-202ENSMUST00000109444 SetxA2AKX3 2646 aa11.93□□□□□ -0.5
Col4a3bp-202ENSMUST00000109444 Phxr4P15974 95 aa11.93□□□□□ -0.5
Col4a3bp-202ENSMUST00000109444 Gm10643Q3URG9 111 aa11.93□□□□□ -0.5
Col4a3bp-202ENSMUST00000109444 Q8BT88 171 aa11.93□□□□□ -0.5
Col4a3bp-202ENSMUST00000109444 Sptbn4E9PX29 2561 aa11.92□□□□□ -0.5
Col4a3bp-202ENSMUST00000109444 4930507D05RikQ8C9C9 103 aa11.9□□□□□ -0.5
Col4a3bp-202ENSMUST00000109444 Krtap11-1E9Q2E9 183 aa11.9□□□□□ -0.5
Col4a3bp-202ENSMUST00000109444 Gm17606F6ZL36 78 aa11.9□□□□□ -0.5
Col4a3bp-202ENSMUST00000109444 Phf5aP83870 110 aaKnown RBP11.9□□□□□ -0.5
Col4a3bp-202ENSMUST00000109444 Hivep3A2A884 2348 aa11.88□□□□□ -0.51
Col4a3bp-202ENSMUST00000109444 Lypd5Q9D7Z7 256 aa11.88□□□□□ -0.51
Col4a3bp-202ENSMUST00000109444 AW011738F6S7Q2 159 aa11.88□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 387 ms