RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Spata3Q9D9T6 193 aa5.24□□□□□ -1.57
Trim40-201ENSMUST00000087158 Trav13d-1A0A075B606 110 aa5.24□□□□□ -1.57
Trim40-201ENSMUST00000087158 4930546C10RikE9Q4Y3 121 aa5.24□□□□□ -1.57
Trim40-201ENSMUST00000087158 Gm10542F6XDR3 90 aa5.24□□□□□ -1.57
Trim40-201ENSMUST00000087158 Higd2aQ9CQJ1 106 aa5.24□□□□□ -1.57
Trim40-201ENSMUST00000087158 MobpQ9D2P8 170 aa5.24□□□□□ -1.57
Trim40-201ENSMUST00000087158 Igkv4-53A0A0G2JFC6 119 aa5.23□□□□□ -1.57
Trim40-201ENSMUST00000087158 Phxr5P08399 672 aa5.23□□□□□ -1.57
Trim40-201ENSMUST00000087158 PtprqP0C5E4 2300 aa5.23□□□□□ -1.57
Trim40-201ENSMUST00000087158 Tm2d2Q8R0I4 213 aa5.23□□□□□ -1.57
Trim40-201ENSMUST00000087158 9430069I07RikQ9CX21 111 aa5.23□□□□□ -1.57
Trim40-201ENSMUST00000087158 Tomm7Q9D173 55 aa5.23□□□□□ -1.57
Trim40-201ENSMUST00000087158 Zfp951A0A087WRH0 451 aa5.22□□□□□ -1.57
Trim40-201ENSMUST00000087158 Gm37389A0A0A6YW05 95 aa5.22□□□□□ -1.57
Trim40-201ENSMUST00000087158 P01823 113 aa5.22□□□□□ -1.57
Trim40-201ENSMUST00000087158 CirbpP60824 172 aaKnown RBP5.22□□□□□ -1.57
Trim40-201ENSMUST00000087158 PemtQ61907 199 aa5.22□□□□□ -1.57
Trim40-201ENSMUST00000087158 Fam19a5Q91WE9 132 aa5.22□□□□□ -1.57
Trim40-201ENSMUST00000087158 Sostdc1Q9CQN4 206 aa5.22□□□□□ -1.57
Trim40-201ENSMUST00000087158 Ighv1-62-1A0A075B5U3 116 aa5.21□□□□□ -1.57
Trim40-201ENSMUST00000087158 Gm7137J3QMW1 236 aa5.21□□□□□ -1.57
Trim40-201ENSMUST00000087158 Gm7138L7N2C3 230 aa5.21□□□□□ -1.57
Trim40-201ENSMUST00000087158 Pglyrp4Q0VB07 374 aa5.21□□□□□ -1.57
Trim40-201ENSMUST00000087158 Odf3l2Q3TZ65 277 aa5.21□□□□□ -1.57
Trim40-201ENSMUST00000087158 Gm10577Q3UDV9 132 aa5.21□□□□□ -1.57
Trim40-201ENSMUST00000087158 SpinklQ8CEK3 90 aa5.21□□□□□ -1.57
Trim40-201ENSMUST00000087158 Gm3238W4VSP7 230 aa5.21□□□□□ -1.57
Trim40-201ENSMUST00000087158 H2al1bA0A087WP11 105 aa5.21□□□□□ -1.58
Trim40-201ENSMUST00000087158 Trbv13-2A0A140T8N6 113 aa5.21□□□□□ -1.58
Trim40-201ENSMUST00000087158 H2al1kJ3QP08 105 aa5.21□□□□□ -1.58
Trim40-201ENSMUST00000087158 Defa4P28311 92 aa5.21□□□□□ -1.58
Trim40-201ENSMUST00000087158 Cops9Q3U898 57 aa5.21□□□□□ -1.58
Trim40-201ENSMUST00000087158 TeppQ6IMH0 216 aa5.21□□□□□ -1.58
Trim40-201ENSMUST00000087158 H2al1eQ810S6 105 aa5.21□□□□□ -1.58
Trim40-201ENSMUST00000087158 Gm4861Q8C5A4 106 aa5.21□□□□□ -1.58
Trim40-201ENSMUST00000087158 H2al1mQ9DAD9 105 aa5.21□□□□□ -1.58
Trim40-201ENSMUST00000087158 Phpt1Q9DAK9 124 aa5.21□□□□□ -1.58
Trim40-201ENSMUST00000087158 Ly6hQ9WUC3 139 aa5.21□□□□□ -1.58
Trim40-201ENSMUST00000087158 Tenm2Q9WTS5 2764 aa5.2□□□□□ -1.58
Trim40-201ENSMUST00000087158 Igkv1-99F6XWB2 120 aa5.2□□□□□ -1.58
Trim40-201ENSMUST00000087158 Ighv8-13A0A075B5Y0 101 aa5.19□□□□□ -1.58
Trim40-201ENSMUST00000087158 Gm10549Q3URY4 149 aa5.19□□□□□ -1.58
Trim40-201ENSMUST00000087158 Tmem223Q9CQE2 199 aaKnown RBP5.19□□□□□ -1.58
Trim40-201ENSMUST00000087158 Notch1Q01705 2531 aa5.19□□□□□ -1.58
Trim40-201ENSMUST00000087158 Trav13n-2A0A0G2JF93 110 aa5.18□□□□□ -1.58
Trim40-201ENSMUST00000087158 Gm19935A0A1B0GSF9 52 aa5.18□□□□□ -1.58
Trim40-201ENSMUST00000087158 Gm11020F6ZGD5 61 aa5.18□□□□□ -1.58
Trim40-201ENSMUST00000087158 Defa16P50714 93 aa5.18□□□□□ -1.58
Trim40-201ENSMUST00000087158 Trav14d-3-dv8A0A075B619 120 aa5.18□□□□□ -1.58
Trim40-201ENSMUST00000087158 Trav13n-1A0A0G2JEU8 110 aa5.18□□□□□ -1.58
Trim40-201ENSMUST00000087158 Lst1O08843 95 aa5.18□□□□□ -1.58
Trim40-201ENSMUST00000087158 Prp2P05143 317 aa5.18□□□□□ -1.58
Trim40-201ENSMUST00000087158 Defa1P11477 93 aa5.18□□□□□ -1.58
Trim40-201ENSMUST00000087158 Tmem258P61166 79 aa5.18□□□□□ -1.58
Trim40-201ENSMUST00000087158 Defa25Q5G864 92 aa5.18□□□□□ -1.58
Trim40-201ENSMUST00000087158 Ighv8-11A0A075B5X4 119 aa5.17□□□□□ -1.58
Trim40-201ENSMUST00000087158 Trav11A0A0B4J1J9 114 aa5.17□□□□□ -1.58
Trim40-201ENSMUST00000087158 1700011M02RikB1AX35 88 aa5.17□□□□□ -1.58
Trim40-201ENSMUST00000087158 Sprr1bQ62267 153 aa5.17□□□□□ -1.58
Trim40-201ENSMUST00000087158 Lage3Q9CR70 148 aa5.17□□□□□ -1.58
Trim40-201ENSMUST00000087158 Zfand2aQ9JII7 171 aa5.17□□□□□ -1.58
Trim40-201ENSMUST00000087158 VwfQ8CIZ8 2813 aa5.17□□□□□ -1.58
Trim40-201ENSMUST00000087158 Rpl28P41105 137 aaKnown RBP5.17□□□□□ -1.58
Trim40-201ENSMUST00000087158 Mrpl55Q9CZ83 127 aa5.17□□□□□ -1.58
Trim40-201ENSMUST00000087158 Igkv3-9A0A140T8P4 119 aa5.16□□□□□ -1.58
Trim40-201ENSMUST00000087158 SelenowP63300 88 aa5.16□□□□□ -1.58
Trim40-201ENSMUST00000087158 4930518I15RikQ3V2W7 57 aa5.16□□□□□ -1.58
Trim40-201ENSMUST00000087158 Ighv2-9-1A0A075B697 116 aa5.15□□□□□ -1.58
Trim40-201ENSMUST00000087158 Igkv6-13A0A0G2JGY3 119 aa5.15□□□□□ -1.58
Trim40-201ENSMUST00000087158 Igkv8-34A0A0G2JDU0 121 aa5.15□□□□□ -1.59
Trim40-201ENSMUST00000087158 Acyp1P56376 99 aa5.15□□□□□ -1.59
Trim40-201ENSMUST00000087158 Hist1h4aP62806 103 aaKnown RBP5.15□□□□□ -1.59
Trim40-201ENSMUST00000087158 Krtap17-1A2A5X6 109 aa5.14□□□□□ -1.59
Trim40-201ENSMUST00000087158 4930524J08RikQ9CUJ5 163 aa5.14□□□□□ -1.59
Trim40-201ENSMUST00000087158 Gm16181B0V2H2 73 aa5.14□□□□□ -1.59
Trim40-201ENSMUST00000087158 Xcl1P47993 114 aa5.14□□□□□ -1.59
Trim40-201ENSMUST00000087158 Defb50Q6TU36 73 aa5.14□□□□□ -1.59
Trim40-201ENSMUST00000087158 4930519P11RikQ9CUJ8 166 aa5.13□□□□□ -1.59
Trim40-201ENSMUST00000087158 Trav9d-4A0A0G2JG37 103 aa5.12□□□□□ -1.59
Trim40-201ENSMUST00000087158 Sec61bQ9CQS8 96 aaKnown RBP5.12□□□□□ -1.59
Trim40-201ENSMUST00000087158 Pkd1l1Q8R526 2615 aa5.12□□□□□ -1.59
Trim40-201ENSMUST00000087158 Trav9n-4A0A075B631 113 aa5.12□□□□□ -1.59
Trim40-201ENSMUST00000087158 Igkv1-117A0A140T8M0 119 aa5.12□□□□□ -1.59
Trim40-201ENSMUST00000087158 Gm20726G3UX18 150 aa5.12□□□□□ -1.59
Trim40-201ENSMUST00000087158 Muc6Q80T03 2850 aa5.12□□□□□ -1.59
Trim40-201ENSMUST00000087158 Kmt2aP55200 3966 aa5.12□□□□□ -1.59
Trim40-201ENSMUST00000087158 Igkv3-1A0A075B5P1 119 aa5.11□□□□□ -1.59
Trim40-201ENSMUST00000087158 Ighv1-56A0A0A6YXG2 117 aa5.11□□□□□ -1.59
Trim40-201ENSMUST00000087158 Gm10647E9Q8X0 124 aa5.11□□□□□ -1.59
Trim40-201ENSMUST00000087158 Snhg11Q4G0K9 87 aa5.11□□□□□ -1.59
Trim40-201ENSMUST00000087158 7530416G11RikJ3QJX6 159 aa5.11□□□□□ -1.59
Trim40-201ENSMUST00000087158 P01755 137 aa5.11□□□□□ -1.59
Trim40-201ENSMUST00000087158 Igf1P05017 153 aa5.11□□□□□ -1.59
Trim40-201ENSMUST00000087158 Prh1P05142 261 aa5.11□□□□□ -1.59
Trim40-201ENSMUST00000087158 E130208F15RikQ3UPV3 143 aa5.1□□□□□ -1.59
Trim40-201ENSMUST00000087158 Ndufa12Q7TMF3 145 aaKnown RBP5.1□□□□□ -1.59
Trim40-201ENSMUST00000087158 EnhoQ8K1D8 76 aa5.1□□□□□ -1.59
Trim40-201ENSMUST00000087158 AplnQ9R0R4 77 aa5.1□□□□□ -1.59
Trim40-201ENSMUST00000087158 Gm11213A0A1B0GR83 88 aa5.09□□□□□ -1.59
Trim40-201ENSMUST00000087158 Gm16381A0A1Y7VKT9 73 aa5.09□□□□□ -1.59
Retrieved 100 of 22,080 RNA–protein pairs in 74.3 ms