RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Q8R092 253 aa11.25□□□□□ -0.61
Trim8-201ENSMUST00000026008 Tmem223Q9CQE2 199 aaKnown RBP11.25□□□□□ -0.61
Trim8-201ENSMUST00000026008 Znf414Q9DCK4 299 aa11.25□□□□□ -0.61
Trim8-201ENSMUST00000026008 Ighv1-56A0A0A6YXG2 117 aa11.24□□□□□ -0.61
Trim8-201ENSMUST00000026008 Igkv4-61A0A0G2JH00 117 aa11.24□□□□□ -0.61
Trim8-201ENSMUST00000026008 Ighv1-59A0A0A6YXE0 117 aa11.24□□□□□ -0.61
Trim8-201ENSMUST00000026008 Igkv8-16A0A0G2JDG9 121 aa11.24□□□□□ -0.61
Trim8-201ENSMUST00000026008 Tenm1Q9WTS4 2731 aa11.23□□□□□ -0.61
Trim8-201ENSMUST00000026008 Itpr2Q9Z329 2701 aa11.23□□□□□ -0.61
Trim8-201ENSMUST00000026008 Igkv8-18A0A0B4J1J3 123 aa11.23□□□□□ -0.61
Trim8-201ENSMUST00000026008 C530025M09RikF6RGA8 229 aa11.22□□□□□ -0.61
Trim8-201ENSMUST00000026008 Gm10518F6UQQ9 182 aa11.22□□□□□ -0.61
Trim8-201ENSMUST00000026008 Ifitm6A0A1B0GS75 124 aa11.22□□□□□ -0.61
Trim8-201ENSMUST00000026008 Igkv3-9A0A140T8P4 119 aa11.22□□□□□ -0.61
Trim8-201ENSMUST00000026008 4930519P11RikQ9CUJ8 166 aa11.22□□□□□ -0.61
Trim8-201ENSMUST00000026008 Igkv8-24A0A140T8P5 121 aa11.21□□□□□ -0.61
Trim8-201ENSMUST00000026008 Higd2aQ9CQJ1 106 aa11.21□□□□□ -0.61
Trim8-201ENSMUST00000026008 Notch2O35516 2470 aa11.21□□□□□ -0.61
Trim8-201ENSMUST00000026008 D730001G18RikA0A087WQU7 115 aa11.21□□□□□ -0.62
Trim8-201ENSMUST00000026008 Dad1P61804 113 aa11.2□□□□□ -0.62
Trim8-201ENSMUST00000026008 Nsd1O88491 2588 aaKnown RBP11.2□□□□□ -0.62
Trim8-201ENSMUST00000026008 Gm5153P01627 120 aa11.2□□□□□ -0.62
Trim8-201ENSMUST00000026008 Defa7P50705 93 aa11.2□□□□□ -0.62
Trim8-201ENSMUST00000026008 Gm10845Q3UNY9 185 aa11.2□□□□□ -0.62
Trim8-201ENSMUST00000026008 Gm3618D3Z4P5 127 aa11.19□□□□□ -0.62
Trim8-201ENSMUST00000026008 Hist1h4aP62806 103 aaKnown RBP11.19□□□□□ -0.62
Trim8-201ENSMUST00000026008 Gm2916Q9D9B9 127 aa11.19□□□□□ -0.62
Trim8-201ENSMUST00000026008 Igkv4-58A0A0G2JGI6 119 aa11.19□□□□□ -0.62
Trim8-201ENSMUST00000026008 Sprr1bQ62267 153 aa11.19□□□□□ -0.62
Trim8-201ENSMUST00000026008 Reg3dQ9QUS9 175 aa11.19□□□□□ -0.62
Trim8-201ENSMUST00000026008 SmcpP15265 143 aa11.18□□□□□ -0.62
Trim8-201ENSMUST00000026008 Defa4P28311 92 aa11.18□□□□□ -0.62
Trim8-201ENSMUST00000026008 Notch1Q01705 2531 aa11.18□□□□□ -0.62
Trim8-201ENSMUST00000026008 CrygfQ9CXV3 174 aa11.17□□□□□ -0.62
Trim8-201ENSMUST00000026008 Naa38Q9D2U5 125 aa11.17□□□□□ -0.62
Trim8-201ENSMUST00000026008 E130218I03RikA0A0U1RNU5 63 aa11.16□□□□□ -0.62
Trim8-201ENSMUST00000026008 Cystm1Q8K353 104 aa11.16□□□□□ -0.62
Trim8-201ENSMUST00000026008 Gm10320E9PW43 113 aa11.15□□□□□ -0.62
Trim8-201ENSMUST00000026008 7530416G11RikJ3QJX6 159 aa11.15□□□□□ -0.62
Trim8-201ENSMUST00000026008 Klk11Q9QYN3 276 aa11.15□□□□□ -0.62
Trim8-201ENSMUST00000026008 MplkipQ9D011 178 aa11.14□□□□□ -0.63
Trim8-201ENSMUST00000026008 Krtap11-1E9Q2E9 183 aa11.14□□□□□ -0.63
Trim8-201ENSMUST00000026008 CrygdP04342 174 aa11.14□□□□□ -0.63
Trim8-201ENSMUST00000026008 Rpl18aP62717 176 aaKnown RBP11.14□□□□□ -0.63
Trim8-201ENSMUST00000026008 CrygeQ03740 174 aa11.14□□□□□ -0.63
Trim8-201ENSMUST00000026008 A0A286YCN5 57 aa11.13□□□□□ -0.63
Trim8-201ENSMUST00000026008 ScxQ64124 207 aa11.13□□□□□ -0.63
Trim8-201ENSMUST00000026008 Defa21Q8C1P2 93 aa11.13□□□□□ -0.63
Trim8-201ENSMUST00000026008 Q9DAA7 145 aa11.13□□□□□ -0.63
Trim8-201ENSMUST00000026008 PolqQ8CGS6 2544 aa11.12□□□□□ -0.63
Trim8-201ENSMUST00000026008 ApcQ61315 2845 aa11.11□□□□□ -0.63
Trim8-201ENSMUST00000026008 PtprqP0C5E4 2300 aa11.11□□□□□ -0.63
Trim8-201ENSMUST00000026008 Igkv3-1A0A075B5P1 119 aa11.11□□□□□ -0.63
Trim8-201ENSMUST00000026008 Ighv13-2A0A0A6YWN3 119 aa11.1□□□□□ -0.63
Trim8-201ENSMUST00000026008 Col6a5A6H584 2640 aa11.1□□□□□ -0.63
Trim8-201ENSMUST00000026008 Gm9805F6YK59 57 aa11.09□□□□□ -0.63
Trim8-201ENSMUST00000026008 Tmem254aP0DN89 123 aa11.09□□□□□ -0.63
Trim8-201ENSMUST00000026008 Tmem254bP0DN90 123 aa11.09□□□□□ -0.63
Trim8-201ENSMUST00000026008 Tmem254cP0DN91 123 aa11.09□□□□□ -0.63
Trim8-201ENSMUST00000026008 9530053A07RikE9PVG8 2581 aa11.08□□□□□ -0.64
Trim8-201ENSMUST00000026008 Tcl1b3P56842 122 aa11.08□□□□□ -0.64
Trim8-201ENSMUST00000026008 Gm9903Q8C9Y8 129 aa11.08□□□□□ -0.64
Trim8-201ENSMUST00000026008 Fam19a1Q7TPG8 133 aa11.07□□□□□ -0.64
Trim8-201ENSMUST00000026008 Lamtor3O88653 124 aa11.07□□□□□ -0.64
Trim8-201ENSMUST00000026008 EnhoQ8K1D8 76 aa11.07□□□□□ -0.64
Trim8-201ENSMUST00000026008 4930556J24RikQ9D4U7 146 aa11.07□□□□□ -0.64
Trim8-201ENSMUST00000026008 P01819 144 aa11.06□□□□□ -0.64
Trim8-201ENSMUST00000026008 4930518I15RikQ3V2W7 57 aa11.06□□□□□ -0.64
Trim8-201ENSMUST00000026008 A830031A19RikQ8BNT5 113 aa11.06□□□□□ -0.64
Trim8-201ENSMUST00000026008 E130208F15RikQ3UPV3 143 aa11.06□□□□□ -0.64
Trim8-201ENSMUST00000026008 Igkv8-27A0A0G2JF28 120 aa11.05□□□□□ -0.64
Trim8-201ENSMUST00000026008 Igkv8-30A0A140T8M3 121 aa11.05□□□□□ -0.64
Trim8-201ENSMUST00000026008 Cox7bP56393 80 aa11.05□□□□□ -0.64
Trim8-201ENSMUST00000026008 Ighv10-3A0A075B5T6 119 aa11.05□□□□□ -0.64
Trim8-201ENSMUST00000026008 Tmem243B2RVB9 118 aa11.05□□□□□ -0.64
Trim8-201ENSMUST00000026008 Ormdl1Q921I0 153 aa11.05□□□□□ -0.64
Trim8-201ENSMUST00000026008 Igkv1-88A0A140T8N1 120 aa11.04□□□□□ -0.64
Trim8-201ENSMUST00000026008 Ntn5Q3UQ22 452 aa11.04□□□□□ -0.64
Trim8-201ENSMUST00000026008 Igkv8-26A0A075B5N5 123 aa11.04□□□□□ -0.64
Trim8-201ENSMUST00000026008 Igkv8-21A0A140T8P7 120 aa11.03□□□□□ -0.64
Trim8-201ENSMUST00000026008 Psors1c2Q80ZC9 134 aa11.03□□□□□ -0.64
Trim8-201ENSMUST00000026008 Ighv2-9A0A075B5Q5 116 aa11.03□□□□□ -0.64
Trim8-201ENSMUST00000026008 Ube2d4D3YUH6 135 aa11.03□□□□□ -0.64
Trim8-201ENSMUST00000026008 CnbpP53996 178 aaKnown RBP11.03□□□□□ -0.64
Trim8-201ENSMUST00000026008 Defa23Q5G866 93 aa11.03□□□□□ -0.64
Trim8-201ENSMUST00000026008 Gm7138L7N2C3 230 aa11.03□□□□□ -0.64
Trim8-201ENSMUST00000026008 Gm3238W4VSP7 230 aa11.03□□□□□ -0.64
Trim8-201ENSMUST00000026008 Cmc4Q61908 68 aa11.02□□□□□ -0.64
Trim8-201ENSMUST00000026008 Ubl5Q9EPV8 73 aa11.02□□□□□ -0.65
Trim8-201ENSMUST00000026008 Ufsp1Q9CZP0 217 aa11.01□□□□□ -0.65
Trim8-201ENSMUST00000026008 Srrm2Q8BTI8 2703 aaKnown RBP11□□□□□ -0.65
Trim8-201ENSMUST00000026008 Serp2Q6TAW2 65 aa11□□□□□ -0.65
Trim8-201ENSMUST00000026008 Msrb1Q9JLC3 116 aa11□□□□□ -0.65
Trim8-201ENSMUST00000026008 Ighv10-1A0A0B4J1J6 119 aa10.99□□□□□ -0.65
Trim8-201ENSMUST00000026008 Defb37Q7TMD2 62 aa10.99□□□□□ -0.65
Trim8-201ENSMUST00000026008 Fam229bQ8CF36 80 aa10.99□□□□□ -0.65
Trim8-201ENSMUST00000026008 Klk9Q32M27 251 aa10.97□□□□□ -0.65
Trim8-201ENSMUST00000026008 A730009L09RikA0A1B0GS82 72 aa10.97□□□□□ -0.65
Trim8-201ENSMUST00000026008 AY074887Q8R5F9 132 aa10.97□□□□□ -0.65
Trim8-201ENSMUST00000026008 9530003J23RikQ8BM26 151 aa10.96□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms